Basic Information

Insect: Agapetus fuscipes
Gene Symbol: -
Assembly: GCA_951799405.1
Location: OX637344.1:3551538-3568489[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00016 0.011 16.7 0.2 3 23 155 175 154 175 0.97

2 15 2.9e-06 0.0002 22.1 0.7 1 23 181 203 181 203 0.98

3 15 5.3e-06 0.00036 21.3 2.7 1 23 209 231 209 231 0.99

4 15 9.6e-06 0.00065 20.5 0.9 1 23 246 268 246 268 0.98

5 15 2.8e-05 0.0019 19.0 0.7 1 23 283 305 283 305 0.98

6 15 2.1e-05 0.0015 19.4 4.7 1 23 320 342 320 342 0.98

7 15 6.3e-07 4.3e-05 24.2 1.5 1 23 357 379 357 379 0.99

8 15 0.00016 0.011 16.7 2.8 1 23 385 407 385 407 0.98

9 15 0.25 17 6.6 1.1 1 23 414 436 414 436 0.98

10 15 2.6e-06 0.00018 22.3 2.0 1 23 442 464 442 464 0.99

11 15 0.041 2.8 9.1 1.8 1 23 471 493 471 493 0.98

12 15 2.4e-06 0.00017 22.4 1.5 1 23 499 521 499 521 0.99

13 15 0.002 0.13 13.2 0.3 1 20 527 546 527 549 0.93

14 15 0.00036 0.025 15.5 2.6 2 23 556 577 555 577 0.96

15 15 3.5e-06 0.00024 21.9 1.4 1 23 583 606 583 606 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00016	0.011	16.7	0.2	3	23	155	175	154	175	0.97
2	15	2.9e-06	0.0002	22.1	0.7	1	23	181	203	181	203	0.98
3	15	5.3e-06	0.00036	21.3	2.7	1	23	209	231	209	231	0.99
4	15	9.6e-06	0.00065	20.5	0.9	1	23	246	268	246	268	0.98
5	15	2.8e-05	0.0019	19.0	0.7	1	23	283	305	283	305	0.98
6	15	2.1e-05	0.0015	19.4	4.7	1	23	320	342	320	342	0.98
7	15	6.3e-07	4.3e-05	24.2	1.5	1	23	357	379	357	379	0.99
8	15	0.00016	0.011	16.7	2.8	1	23	385	407	385	407	0.98
9	15	0.25	17	6.6	1.1	1	23	414	436	414	436	0.98
10	15	2.6e-06	0.00018	22.3	2.0	1	23	442	464	442	464	0.99
11	15	0.041	2.8	9.1	1.8	1	23	471	493	471	493	0.98
12	15	2.4e-06	0.00017	22.4	1.5	1	23	499	521	499	521	0.99
13	15	0.002	0.13	13.2	0.3	1	20	527	546	527	549	0.93
14	15	0.00036	0.025	15.5	2.6	2	23	556	577	555	577	0.96
15	15	3.5e-06	0.00024	21.9	1.4	1	23	583	606	583	606	0.97

Sequence Information

Coding Sequence: ATGTTCGAGCAGCAAATCAAGGCCGAACCCATGGGTTTCTACTCGTCCCATCCGCACGTGCACTCGGCGCCCCCAACCGTAGTGCGCGGCGACAACTCCAACCACGCCATCATCAACATCAACTCACAAGcccaacagcagcagcagcagcagcaacaacagcagcagcaacagcagcagctacagcagcagcagcaacaacagCAACAGCAGCTGCAGGAACAGCATCAGCTGCAGGAGCAGCAGCTGCAGGAGCAGCAGCAGCTGGCAGAGCAGCAGCAGGAAGACAGTAAGGAGAGCCTGGTGCTgcagcagcaacagcagcaggggctcagccagcaGCAGGGGACACAGGACCAGAACCAGGGCCTGGTGGGCGTGGCGGGGCTGGGCACTGTCACCAAGCTGGAGCATGAGGGCAGCCTGTCTGGGGGGATGCCCCCGCGCTCCAAGCCCCAGGCCTGCAAGGTCTGCGGCAAGATGCTCTCCTCCGCCTCCTCCTACTACGTCCACATGAAGCTGCATTCGGGCGTAAAACCATTTGCTTGCACGGTGTGCGACGCGGCGTTCTGTCGCAAGCCTTACCTGGAGGTGCACATGAGAACCCACACGGGGGAGCGGCCCTTCCAGTGCGAGCTCTGCCTCAAGCGCTTCACGCAGAAGTCTAGTCTCAACACACACAAGCGCGTCCACACAGATGAGCACATGCGGGCTCTGCTGGTGAAGGACCGGCCCTACGAGTGCGACATCTGTCAGATGAGGTTCACGCAGAGCTCCAGCCTCGGGAGACACAAGAAAATACACACCGAGGAGCACAGACGAGCGCTGCTGGCCAAGGAACGGCCCTACCAGTGCGAGATCTGCTTTGTGAGGTTCACCCAGAAGTCCAGCCTGGGCCGCCACGCCAAAATACACACCGAGGAACACAGACTGGCCCTGTTAGACAAAGTGCGTCCGTACCAGTGCCACGTGTGTTACATGCGGTTCACGCAGAAGTCCAGCCTCAACCGACACTCCAAAGTGCACACCGCGGAACACATGCGCTCGCTGATCAACAAAGTGCGTCCTTACCAATGCGACGTGTGCGACAAGCGCTTCACTCAGAAGTCCAGCCTCGGAACCCATAAACGCATTCACACCGGAGAGCGTCCCTTCCAGTGCACCGTCTGCCTCAAGTCGTTCACGCAGAAGTGCGCGCTCAATTTGCACGAAAAAATACATACGGTCCAGGGCAGGCCGTTCCAGTGCCTGGCGTGTCCCGCCGCCTTCACCTGCAAGCAGTACCTGGAGATCCACAACCGCACGCACACGGGCGAGCGGCCCTATGAGTGCGAGCTGTGCCTCAAGCGCTTCACTCAAAAGTCCAGTCTGAACATCCACAAGCGCACGCACTCAGTCCAGGGCCGCCCCTTCCAATGCCTGCAGTGCCCGGCGGCCTTCACGTGCAAGCAGTACCTGGAGATCCACAACCGCACGCACACCGGCGAGCGCCCCTATCAGTGCGATGTCTGTCTGAAGCGCTTTGCGCAGAAATCTACCCTCAACATCCATAAACGAACCCACACAGgtGAGCGCCCGTACGCCTGCGATATTTGCCAAAAGCGATTCGCTGTGAAGAGCTATGTCACAGCACACAGGTGGTCCCACGTGGCAGAGAAGCCCCTGTGCTGTGACCGCTGCTCCATGACCTTCACCTCCAAGGCCCAGTTTGCGCTGCACATCCGAACCCACCAGGCGGGGCCGTGCTACGAGTGCAGCGTGTGCGGGAGGACGTTTGTGCGCGACAGCTATCTCATCAGGCATCACAACCGCGTGCACCGTGAGAACCACAGCAACGTGTCGGCCAACAGCATCGCCACCATCAACAGTGTTGCCACCAACACCAACACATCAAGCGCCTTTGATTCACCCGGTGTTTGTGATCTAAGCTTTGTCCCGCTGGTGAACCGCTACGTGTCGGGCATAGCCGCGGGCATGACGTCGCAGGGCACGCAGGTCTCCCTGCAGGACACGCTGCAGATGAAGCCCCACCCGCTGTCCCCCTCGTCCATCGGCTCTCCGCCCCCGCCCCACACCCCCACCCCGGGGCCCCCTCAAGGTGACGTGCAACAGAACTCGTACTAA
Protein Sequence: MFEQQIKAEPMGFYSSHPHVHSAPPTVVRGDNSNHAIININSQAQQQQQQQQQQQQQQQQLQQQQQQQQQQLQEQHQLQEQQLQEQQQLAEQQQEDSKESLVLQQQQQQGLSQQQGTQDQNQGLVGVAGLGTVTKLEHEGSLSGGMPPRSKPQACKVCGKMLSSASSYYVHMKLHSGVKPFACTVCDAAFCRKPYLEVHMRTHTGERPFQCELCLKRFTQKSSLNTHKRVHTDEHMRALLVKDRPYECDICQMRFTQSSSLGRHKKIHTEEHRRALLAKERPYQCEICFVRFTQKSSLGRHAKIHTEEHRLALLDKVRPYQCHVCYMRFTQKSSLNRHSKVHTAEHMRSLINKVRPYQCDVCDKRFTQKSSLGTHKRIHTGERPFQCTVCLKSFTQKCALNLHEKIHTVQGRPFQCLACPAAFTCKQYLEIHNRTHTGERPYECELCLKRFTQKSSLNIHKRTHSVQGRPFQCLQCPAAFTCKQYLEIHNRTHTGERPYQCDVCLKRFAQKSTLNIHKRTHTGERPYACDICQKRFAVKSYVTAHRWSHVAEKPLCCDRCSMTFTSKAQFALHIRTHQAGPCYECSVCGRTFVRDSYLIRHHNRVHRENHSNVSANSIATINSVATNTNTSSAFDSPGVCDLSFVPLVNRYVSGIAAGMTSQGTQVSLQDTLQMKPHPLSPSSIGSPPPPHTPTPGPPQGDVQQNSY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -