Afus020604.1
Basic Information
- Insect
- Agapetus fuscipes
- Gene Symbol
- bab2
- Assembly
- GCA_951799405.1
- Location
- OX637358.1:3078388-3105730[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.0085 2.8 8.2 0.0 4 38 488 522 485 528 0.79 2 3 7.7e-07 0.00026 21.1 0.0 3 34 738 768 736 776 0.89 3 3 2.1 7.1e+02 0.5 0.0 8 34 908 933 905 943 0.75
Sequence Information
- Coding Sequence
- ATGGCGACGCTGGGACCGCAGCAGTTTTGCGTGAGATGGAACTCTTACCACACCAACCTGCAGACCATCTTCCCGAAGCTGCTGACCACAGAGAACTTTGTGGACGTGACGCTGGCCTGCGAGAACAGGCAGATCAAGTGTCACAAGGTGGTGCTGAGCGCCTGCTCCACTTACTTTGAGCGTCTGCTCATCCAGAACCCGTGCAAGCATCCCATCATCTTTATGAAGGACATGAGgTTCTCAGAGATGCAGTCGCTGGTGGACTTCATGTACAAGGGGGAGGTGAACGTGACCCAGGACGACCTGCCCAGCCTTCTCAAGTCCGCCGAGGCTCTGCAAATCAGAgGTTTGTGCGGGGCAGACTCGGGATTAGGAAACTCTGGAGAGCCTCCAGCACCAAGTCAACCTGCCAACAACTCCTCGGACAGGCTGCAGCATCCAGGGGAAACCAAAGACAACTCTGGAAAAGTCACAAACTCTACGGCCATACAGACCTCCCTGCCAGGCAAGACCACAAGCCCCGCCCCCATGCAGGCGGTGGGCGGAGCCAAGCGGGGAGGGGGCGGGGTCAGCCCGGAGGCCACGCCCACTGAAGCCAAGAGACAGGGCGCCAGCAACGGAGAGACCAAGCAGGAGACTGTGGAGGAGGACGGCCTGTACTATGGAGAGATGGAGAACGATGAGATGGAGTGCGGCGATCAGACTGAAGATGAAATGCTTCAAGGAAGCGGTGGCTGTGAACAACCATCAACCGgAAACATCAAGATGCCTCTGATCCGCATCAAAACTCCATCCGAGCTGTCTGTTAGAAGTGACCAAGACATCCAGAATAGCGCCTTAATAGACCAACTCAAACACACTTCAAAGATATCCGTACAAACTTTTGGTCACATACAAAACAATGATAGAATGACCGTTGCACAAAGTGATAAAATGGCAAAAGAAAAGCTGATTTCCGATAAAGAAAACGTTGTAGAAATGGACGAGGGATTGTATGACGATGTTGAATTTGTCAAAATGTGGCTGCTGCAAAATCAGCAACTGGAAGTGTCCCTGTCCGAGCCAGAAAAAATATATGGGACCGGCATTGTGTtgccaaagtatgaaaaaaactgCATCCCCAAGGTGAAGCACGAGAGTGTCGCCATAAAGCAAACTAagttagatcaaaataaagcaCCGCCAAAGAACCAAGCGGGGAAGAGCGCCTTGCTCGATAAGAAATGGCTAGAGTATTACAATAAGAGCGATATCCTGCACGGAGATTTCTTTGGAGGCAAGGGGCAGTGCAAGAAGAAGAGCAAACTCGCCGGGAATGTTGATGTGGTGGATTTCTTGGAGCCGTCAGATTTGGAACAGTTCTTGGCCGGGAAGGAAGTCAGCTCATCTGGGATATCACGCAAGGCAATCGAGCAAGCCATGATGGGGAAGTATAACCCGAATAGGAGGTATTCCAATCAGGCCATGTGGTCGGCTCTTATGGATGTGAAACAAGGAGGCAGTATCTACAGGGCGGCTCAAACTCACAAAGTACCAAGGAAATCCTTGCGCAACTGGATGAAACGCTGGCACATCAAATCCTCCTTCCCAATGCCGCAGCAGCTCAAGCAGTTTGTGGAGAACAACAAGAAAAACAAGCTGGAACTGCGGCGAGACTTTGCCAACAGCTTGCTAAGCTTCGGAGATCCGTCCAAAATGGCCTCCCAATTTTCTAACTTAGAAAGTGATGGAATCGTCACTGATTTATCGATTAAGAAAGAATTGACCACGATGGAAGCGGAGAATTTTACTAGTTTCTTTGATATGTCACAAGATTATTTCAGACGTATTGAGGAGAAGTTTAATACGGCTCCCATGCCATCCAGCGAGGATGAGAATAATGTTAGTAAGAATGAGTTAGATGAAAAAGCCATGATTGAACATGACGACGATGAAAATGATTTGGAAAAGAATGATGCGTCGGCTGCCGCCCGATTCAGTCGGCCCGCCAAACCGACCAATCGCAAGCGGGGCGGCCGGCGAGCGTCAAACCTAGGAGGCCCGACACCCGAGGACCTCAGCGAAGCCTTCCTCCCATTCCCCGCACCTTCTACAAACCTATTCGGCTTTCCGTCCATCCTGGCCACCAGTCCAGCCTATGCCAATACTAACTTTTATGAGGACCTGACAAACGACTTGCATTTGATGAAGTCTTTCAAGAGATATACGTCGGCAAATCTCAAGGAGGCGTTAATGTCGGTGAAGAATGGATCTAGCGTGTACAGTGCGGCTAAAAAATATGGGATACCCAAGAAGACCTTGGGGAACTGGATGAGAAAGTATAATATTAAAAATTTTGCGATAGCCAACGTGACGTGCGAGTATGACACGTCTCGCTCGGCCTCCCCCGCCTCTGTGTCGGGAGGTGCTGGGGGAGCTGCCGCGGCTCCTGGAGGGGCGGCGGCCAACGATGACCACAACTACAATGCGTCACACAGCGACAGCTGCGAGCCCCCCGCCTTTATCATCAAACAGAATGACCCTGAGGCGTTGCTGAGCCCCCACAGCACGCACCTGAACCAGCAGCTGCTCGCCATGAGCCGCAAGCTGCTGGCCTCCTCCGCCAAGCCCATCCAGATATACCGCGGCCGCCCCGCCACGCCCCCGGGGCCCGCCAACATGGCCCAGCAGGACCTGGGCAACACCAAGAGGATACGCAGGTCAGAGGTGCTGCTCAAGCAGGCCGCGGACTGCGTGAGCCGCGGACAGACCTTCCAGACTGTTTCCGATCAGTTCAACATACCCATCTCTACTATAAGATTCTTCATGGCTCGCAAGGGCATCCTACCGCGCCGCAAGCGTGGTCGCAGCTCGGCGGGCCCCCCCTGCCCCCCCTCCCCGCTGCAGCGCCCCCCGCAGGCAGACAGCCCCACCCAGCCCCCCTACCACATGGCGCATTACAAGCTGCCCGACATGGACCTCGGCAGGGTCTCTTAA
- Protein Sequence
- MATLGPQQFCVRWNSYHTNLQTIFPKLLTTENFVDVTLACENRQIKCHKVVLSACSTYFERLLIQNPCKHPIIFMKDMRFSEMQSLVDFMYKGEVNVTQDDLPSLLKSAEALQIRGLCGADSGLGNSGEPPAPSQPANNSSDRLQHPGETKDNSGKVTNSTAIQTSLPGKTTSPAPMQAVGGAKRGGGGVSPEATPTEAKRQGASNGETKQETVEEDGLYYGEMENDEMECGDQTEDEMLQGSGGCEQPSTGNIKMPLIRIKTPSELSVRSDQDIQNSALIDQLKHTSKISVQTFGHIQNNDRMTVAQSDKMAKEKLISDKENVVEMDEGLYDDVEFVKMWLLQNQQLEVSLSEPEKIYGTGIVLPKYEKNCIPKVKHESVAIKQTKLDQNKAPPKNQAGKSALLDKKWLEYYNKSDILHGDFFGGKGQCKKKSKLAGNVDVVDFLEPSDLEQFLAGKEVSSSGISRKAIEQAMMGKYNPNRRYSNQAMWSALMDVKQGGSIYRAAQTHKVPRKSLRNWMKRWHIKSSFPMPQQLKQFVENNKKNKLELRRDFANSLLSFGDPSKMASQFSNLESDGIVTDLSIKKELTTMEAENFTSFFDMSQDYFRRIEEKFNTAPMPSSEDENNVSKNELDEKAMIEHDDDENDLEKNDASAAARFSRPAKPTNRKRGGRRASNLGGPTPEDLSEAFLPFPAPSTNLFGFPSILATSPAYANTNFYEDLTNDLHLMKSFKRYTSANLKEALMSVKNGSSVYSAAKKYGIPKKTLGNWMRKYNIKNFAIANVTCEYDTSRSASPASVSGGAGGAAAAPGGAAANDDHNYNASHSDSCEPPAFIIKQNDPEALLSPHSTHLNQQLLAMSRKLLASSAKPIQIYRGRPATPPGPANMAQQDLGNTKRIRRSEVLLKQAADCVSRGQTFQTVSDQFNIPISTIRFFMARKGILPRRKRGRSSAGPPCPPSPLQRPPQADSPTQPPYHMAHYKLPDMDLGRVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00023912;
- 90% Identity
- iTF_00023912;
- 80% Identity
- iTF_00023912;