Afus008181.1
Basic Information
- Insect
- Agapetus fuscipes
- Gene Symbol
- bab1
- Assembly
- GCA_951799405.1
- Location
- OX637339.1:19831283-19832326[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.8 1.6e+03 -0.6 0.0 28 39 131 142 131 147 0.78 2 2 1.2e-10 4.1e-08 33.3 0.0 1 35 206 241 206 246 0.93
Sequence Information
- Coding Sequence
- ATGCCGGGCGTATCCGGAAGCCCCCCCAAGGTCACACCGTCGCTGTACAGCCTCAAGTGGAACAATCACCAAGGAAGTCTCACCACGGGCTTCGAGAACCTCCTCCGGACACAGTGCTTTGTGGACGTCACCCTCTCCTGCTCCGGACAGAAGATAATGGCTCATCGAACCGTCCTAGCAGCCTGCAGTCCTTACTTTCAACATCTCCTGGCAGACAACCCTTGCGAACATCCAATAATCATCTTAGAACACATTGATTTTGAGCTTTTAAGAGCTATAATTGAATTCATGTACAGTGGAGAGATCAGTGTTGCGAGCGAGCTGATAACCCCGCTTTTACGCGTCGGGAAAAGTTTGATGATTCGGGGATTAACCGATGTGGATGTGCCCGTAGCTAAGAGTACATTGGAGGACTATTTGAGTACGATGATTGAAGTCGAAGATGGTGAGGTTGTCGGGAAGCAGGAAGAGGTTGTAGAGAAGATTGCCGATGTTGTGGAGAGCGTCGATGATTTGATTGAGATTAAATCAGAAGAGGAATTGAGCACGACGGGAGTGAAGAGAAAAAGATCGCAGTACGACGAACAGAACCCGAAATCTTCCAAGCCCAACTGGTCGGAAGAGCAGCTGCACAAAGCCGTGAATGCCGTCGTCACGCAGAAGATGCGGTTCACGCAGGCAAGCAAGAAGTACGGAATACCCAAAGGGACGTTGTACGATAATATATTAGGGAAATCTAAGAGGTTGCGGGTTTTGGACGAGGCTGGATTGACTGCGCTCGAAGAACGGACTGTGCTCGAGTTCTGCTGTGACGTTTCCAAGTCTCCGTACAATCGGAGGACCAAGAAGAGCCTGGcggaggtgctgaactgtgtgGAAGTGTTGAGGCGAGCTAGGAATCCGCATTTTGCCTTCAAAGGACTAGCGGGCTTCAGGTGGTGGTGGGCGTTTTGTAAAAAGCACTCCATCGTGTCGTTGCATTTTGAGAAGGGAGACGGCCCGGAGGAAGTTGAAATTGAGGATGAAAGTCTACCCGTTGCTTGA
- Protein Sequence
- MPGVSGSPPKVTPSLYSLKWNNHQGSLTTGFENLLRTQCFVDVTLSCSGQKIMAHRTVLAACSPYFQHLLADNPCEHPIIILEHIDFELLRAIIEFMYSGEISVASELITPLLRVGKSLMIRGLTDVDVPVAKSTLEDYLSTMIEVEDGEVVGKQEEVVEKIADVVESVDDLIEIKSEEELSTTGVKRKRSQYDEQNPKSSKPNWSEEQLHKAVNAVVTQKMRFTQASKKYGIPKGTLYDNILGKSKRLRVLDEAGLTALEERTVLEFCCDVSKSPYNRRTKKSLAEVLNCVEVLRRARNPHFAFKGLAGFRWWWAFCKKHSIVSLHFEKGDGPEEVEIEDESLPVA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00023919;
- 90% Identity
- iTF_00023919;
- 80% Identity
- iTF_00023919;