Basic Information

Gene Symbol
ct
Assembly
GCA_951799405.1
Location
OX637344.1:12156623-12169799[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 9e-32 4.6e-28 97.5 0.0 4 77 350 424 348 426 0.96
2 2 1e-30 5.2e-27 94.2 0.0 3 75 567 640 565 644 0.95

Sequence Information

Coding Sequence
ATGTGGCTAAAATCAACATGGGCGCTGAACgaagatgatgatgCAGGCAAGGAAGGCGGGATCCCTCAGTTTGGGCGCGCAGATTCTGCGGACCTGAACGAAGAACGGATCGCCCACATCCTTTCGGAGGCGTCCCAGATGATCAGAACTCCTGCACCCACTGAAGACTCCAGAAGCAATGATGATTCCAAGTCACCGCATGGGCAGTGCCTGTCGCCGTTCTCCAACAAGGAGTCGAGTCAGAACCGTCGTCTGAAGAAGTACGAGAACGACGACATTCCCCAGGAGAAGGTGGTGAGGATCTATCAGGAGGAGCTGGCCAAACTGATGGGCAGGAGGATGGAGGACATGCGCCAGCCGAGGGAGGGCTTCCCGGGTTTTTTCTTTCCCCAATACAGCGGCAACCCGATGGAGCGCCACATGGAGCGGCCTCCCGATGACAACATCCGCATGGCGCTGGAGGCTTACCACAGGGAGCTGGCCAAGCTGCAGCAGAGCGGGCTGACCCCCGGTATGCCCCCCCTGCCACCCACCCTGCCGCCCACCCTGCCGCCCAACCTGCCCCCCGGCTTCCCCGGCCTCTTGGCGCTGCAGCACCAGCACCAGCAGCACCAGCAGCACCAGCAGCACCAGAACCCACACCTCAACGGCGGGGGCGGCGTGCAAGACCTCTCCCTGCCCAAGGAGAAGATGATGAAGATGAATGGCATCACAGAGTCAGACAAAGAAAAGGCCATGGACGCAGAAGAGGCGATCAGGCACGCGGGAAGCGCATTCAGTCTAGTGCGACCCAAACTGGAACCTGGCTCTCAACCATCCACTGGGAGCTCTGCCTCAAGTCCTCTGGGAAACAACATCCTCCCGCCTGCCATAACCCCGGGAGAAGAATTCTCCGCAGCGGCAGCCGCGAGTCCTCTGCAGAGGATGGCCTCCATCACCAACAGCCTGATCTCGCAGCCCTCAAACCAATCCCACCACAGCCCCTCCCAAAGACCTCTCAAAGCTGTTCTCCCCCCGATCACGCAACAGCAGTTTGATCTGTTCAACAACTTGAACACGGAAGATATTGTGAGACGTGTCAAGGAGTCGTTGAGCCAGTATTCCATCAGTCAGAGGCTTTTCGGAGAGTCTGTGCTGGGATTGTCTCAAGGGTCGGTCAGTGATCTGCTGGCGAGGCCGAAGCCCTGGCACATGCTGACACAAAAAGGCAGAGAACCTTTCATAAGAATGAAGATGTTCTTGGAAGATGACAACGCTGTCCACAAGCTGGTGGCTTCCCAGTACAAGATAGCGCCCGAGAAACTGATGCGAACTGGCAGTTACGGCGGTATACCTCAATGCCCCGCCAACCTGAGCAAGCCCATGCAGCCCACGCAAAAGATGATCTCGGACGCCTCCCAGCTGCTGAGCAGGATGCAGCAGGAGCAGCAAGCCAACATGGGAGGCGGAGGGATGGGAGGAGGTCCTGGGGCGCCGCCCCCTCTGCTTCTCACCCCGCCCGGCTTCCCGCCCCACCCCGCGCTGCAGCAGCTGCGGCCCCAGGACCCCAACCACGACCACAAGCCTGGCAagcctcccccccctcccccgcccAACATGCATCATCACTCCCCTCTGCCTCCTCACCAGCAAGGCTCCGTCATGAGGGCTCTCCACCAGCACATCTCGCCAAGCGTCTACGAAATGGCAGCTCTCACTCAAGACTTAGATACGCAAACCATAACCACCAAAATCAAGGAAGCTCTTCTTGCTAACAATAtaggacaaaaaatatttggCGAAGCCGTTCTAGGTCTCTCGCAAGGCTCTGTTTCTGAGCTCCTCTCCAAACCGAAGCCTTGGCACATGCTCAGCATCAAGGGAAGAGAACCATTCATTAGGATGCAGCTGTGGCTCAGCGATGCACACAACATCGACAGGCTGCAGGCGCTGAAAAACGAAAGAAGGGAAGCCAACAAGCGGAGGAGGTCTACAGGACCCGGGGGACAAGATAATAGTTCTGACACTTCATCTAATGATACAGCAGAGTTCTATCATTCCACATCTCCAAGCCCACATCCGGGGGGACCTCCTTCAGCCAAGAAACAGCGAGTTTTATTCAGTGAAGAACAAAAAGAAGCTTTGAGACTTGCTTTCGCCTTGGACCCATACCCCAACATGGCAACTATTGAATTCCTTGCAACAGAGCTTGGCCTATCAACAAGAACAATAACAAACTGGTTTCACAATCATCGCATGCGCCTCAAACAACAAGTCCCTCACGGAGGCAGTGGAGAAATCCCTCCCAGAGATCAATCAGGGAACCAGGCACCGTTTGACCCGGTCCAGTTCCGCTTATTGCTCAATCAGCGCTTATTAGAGCTCCAAAAGGAAAGGTTAGGACTCTCTGGAGTTGCTCTCCCTTATCCTCCATACTTTGCAGCAAATTCCAACTTGGCTGCACTCCTGGGAAGGGGTCTCCTTCCTCCAGGGGATGCTGAACTAGCTTTGAATGCTGTTAAAGAACAAATGAGTGGATTAGATCTCAGTATGCCCCTGAAGAGAGAAACAGATGTTGATgactttgatgatgatgacgttGAGAGCAACATGGGATCTGACGACTCCTTGGATGAACGCAGTTTTGTTGAAGGGGACGGAGAAGGTGACGGGGACGATGGAAAGAGAGACTCCATGCCACGCACAACAGCTCCCGGAGCAAGGTCTAGCCGGCGCAAGCCTGCAGCTCCACAGTGGGTGAATCCTGACTGGCAAGATGACAAAGAGCGCCCTCCTAACCCTGATGAGGTCATCATCAATGGAGTGTGTGTGATGCAGACAGAAGACTACGGCAGGAGGGCGAACGAGCGAACTGTTCATGTGGAACCCTCGGGAGCAGAAGTAGAAGGGGAAGCCAATGCCGAAGGGGCCCCCCCCACCAGGTCTTCCCCTGCAGCCCCCGATACCTCCTCTGCCCCCGCAACTCCTGAACAACCGCCGTCCAGAGAACAAATACCAAATGAAGACATTGTCAAAACAGAAGTTGACACAGAGAGATGGGAGTATTGA
Protein Sequence
MWLKSTWALNEDDDAGKEGGIPQFGRADSADLNEERIAHILSEASQMIRTPAPTEDSRSNDDSKSPHGQCLSPFSNKESSQNRRLKKYENDDIPQEKVVRIYQEELAKLMGRRMEDMRQPREGFPGFFFPQYSGNPMERHMERPPDDNIRMALEAYHRELAKLQQSGLTPGMPPLPPTLPPTLPPNLPPGFPGLLALQHQHQQHQQHQQHQNPHLNGGGGVQDLSLPKEKMMKMNGITESDKEKAMDAEEAIRHAGSAFSLVRPKLEPGSQPSTGSSASSPLGNNILPPAITPGEEFSAAAAASPLQRMASITNSLISQPSNQSHHSPSQRPLKAVLPPITQQQFDLFNNLNTEDIVRRVKESLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGSYGGIPQCPANLSKPMQPTQKMISDASQLLSRMQQEQQANMGGGGMGGGPGAPPPLLLTPPGFPPHPALQQLRPQDPNHDHKPGKPPPPPPPNMHHHSPLPPHQQGSVMRALHQHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNIDRLQALKNERREANKRRRSTGPGGQDNSSDTSSNDTAEFYHSTSPSPHPGGPPSAKKQRVLFSEEQKEALRLAFALDPYPNMATIEFLATELGLSTRTITNWFHNHRMRLKQQVPHGGSGEIPPRDQSGNQAPFDPVQFRLLLNQRLLELQKERLGLSGVALPYPPYFAANSNLAALLGRGLLPPGDAELALNAVKEQMSGLDLSMPLKRETDVDDFDDDDVESNMGSDDSLDERSFVEGDGEGDGDDGKRDSMPRTTAPGARSSRRKPAAPQWVNPDWQDDKERPPNPDEVIINGVCVMQTEDYGRRANERTVHVEPSGAEVEGEANAEGAPPTRSSPAAPDTSSAPATPEQPPSREQIPNEDIVKTEVDTERWEY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01012016;
90% Identity
iTF_00023591;
80% Identity
iTF_00023591;