Basic Information

Insect: Aethes cnicana
Gene Symbol: ZNF275
Assembly: GCA_963971205.1
Location: OZ020299.1:2506582-2527410[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.036 2.5 9.4 1.7 1 23 363 385 363 385 0.96

2 11 0.1 6.9 8.0 1.9 2 23 393 415 392 415 0.93

3 11 1.1 73 4.7 2.4 1 23 419 441 419 441 0.90

4 11 0.00055 0.037 15.1 5.4 1 23 446 469 446 469 0.97

5 11 0.15 11 7.4 0.8 1 23 473 496 473 496 0.94

6 11 0.071 4.8 8.5 0.2 2 22 508 528 508 532 0.92

7 11 0.36 25 6.2 1.3 2 23 568 590 567 590 0.96

8 11 2 1.4e+02 3.9 0.5 2 10 608 616 607 626 0.90

9 11 2.9e-05 0.002 19.1 0.2 1 23 635 657 635 657 0.98

10 11 2.3e-08 1.6e-06 28.9 1.2 1 23 664 686 664 686 0.99

11 11 0.0016 0.11 13.6 0.8 1 23 692 715 692 716 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.036	2.5	9.4	1.7	1	23	363	385	363	385	0.96
2	11	0.1	6.9	8.0	1.9	2	23	393	415	392	415	0.93
3	11	1.1	73	4.7	2.4	1	23	419	441	419	441	0.90
4	11	0.00055	0.037	15.1	5.4	1	23	446	469	446	469	0.97
5	11	0.15	11	7.4	0.8	1	23	473	496	473	496	0.94
6	11	0.071	4.8	8.5	0.2	2	22	508	528	508	532	0.92
7	11	0.36	25	6.2	1.3	2	23	568	590	567	590	0.96
8	11	2	1.4e+02	3.9	0.5	2	10	608	616	607	626	0.90
9	11	2.9e-05	0.002	19.1	0.2	1	23	635	657	635	657	0.98
10	11	2.3e-08	1.6e-06	28.9	1.2	1	23	664	686	664	686	0.99
11	11	0.0016	0.11	13.6	0.8	1	23	692	715	692	716	0.93

Sequence Information

Coding Sequence: ATGAAGAAATGCGTGGTAAAAGATTGCAGAAGTACCGATTCAGTACCGTCAATTCTGTTCCATCCGTTTCCAATAAATCACTGTTATAGACAACTGTGGCTGTCTAGAATAAAGCTTGCGCGTAAACTTGGCAAAAGGGCTGTGGTTTGTGGTTTACACTTCAAGCCGGAAGACTACGATGAACGTAACCAATTGATTTACAATGCGGTGCCTCAAGAAACAGGATGTAACTCTGCACTACAGACATCATCCTCGGAGCATATTTTTAACAACATATCAGTAGGAAGTACTCTTAACGAAACACTGCAAGTCATAAAAGTTGATGTAGCATGTCGCGCGTGTCTGGCTGTGGATTGCAAAATGTTCCCGCTGACGAACAACAAATTGAAGCAGGCGTATACTCAAGTCACTGGAATCGCGGCGTCCCCAGACGACGGTCTTCCCCAGTTATTGTGCTGGGAATGCACTTCCCGAGTCCTTTCATCGGCTAGACACCGAGCTAGGGCGAAGAAAGCTCATGCTGTGCTTACTGCACTACTCTCTAAAGGAtgtATTAATATGGACGATATTCGCTCAATAGACCGGCACCAAACGAAACTGCTGTCTTCATTGACTCACAAGTATTTTAAACAAAACGAATGTAACATGAATATTAACAATCTGACAGAATTAAACGAACCGGACGGTCTCGAAAACATCGACCGtatgtatgaaaatacagaACACATAGACGATGCTAGTGAAGAATCCGAAAATTCCGATGATAATAGTAAACATGGAATCGATGAAAGAGTTAAATCTGACATAGTTAATCAAGATGAAATTGATGATAAAAATGTAGTGAACATTTTCATAGAAATAGATAAAATTGTAGAGAAGAAATTAAATACGACTGATTTGGAACAAGAAGGCAAGAAAAACAGGCAGCGGAAACCGAAGCGTAGTTCAAATGTTAAAGGAACCCGCGGAAAAGATGGTACATCGAAATCGCTTCAGGATTTTTTCACTATAAGTAACATGAAACTGGAAGAAGAAATTGCGTCGGTCGAGGAACGAAAACATTCTGTGGCATACATAAATGCACCATTCAAGTGTGAAATTTGCTATCGTGGGTACTCTAATAAGGAGAGCTGTGAAGCACATGCTTTAAAACATACAGAGAAATTTGGCGACATGGAGTGCCCGGTGTGTAAATTTCGGTACCGAACGAAGCAGGACCTCTGGTGTCACGTGAACTCGAACCATCGCAACAGATACCGCTGCAAGCAGTGCGACTTCGTCACGAACACCAGGACCACAGCGGATAACCATTACACGTTCCACGTCGGCGCCGTATTTAAGTGTCCACATTGCCCTAAACagtttaaTAAGAAGACAACATACTACAGTCATCTCAGATTGAAACACGCGTGTAATTTCCCGTGTGAACTATGCGGGCACACTTTCCTGAGCGCGCAAGGCATGGCGATGCACAAGCGGAGGCGGCACATTCTACAAAACACGACGTCGGACGAAGGTCCCCGCTGCGACGCCTGCGACGTCACGTTCGCGACTCAAGCCGCGTACGACACGCACCTGAGGATGTCCTCACGACACAACAACGACAATCAGCGGGCAATAGTGAACGCTTACCAGGCGACGCCGAGGGAGTTCGACGCAGAAGGGAACCCGCGGCGCGCGAGCCGGAAGAAACGAGCCGTCACGTGCGAACAGTGCGGCGTAACCCTAGACAGCATGTACGCATACTCTCATCACTTCAGAAAGAAGCACCCCGCCGCGACTCGAACCCAGCACGCCGCGCAACGCCGGGGCGCGCCCGTTGTATGCGAGCTATGCGGGAAGAAGTTTCATTGCATGGCAATACTGAAGTCCCACATGCCCATTCACACCGGCGAGCGCGGGTTCAAATGCGGCGAATGCGGTAAAACTTTCCCGGGAAAATTGAACCTTGACATACATCAGAAGCTGCACCGGCCGTCGAGACCGACTTTCCAGTGCGAGATCTGTCAAAAACGGTTCAGCAGCAGCGGGAATTTGAAGAGGCACATACTTACGCACTCGAACGCGACCCCGTTCGAGTGCGAAGCTTGCGGCAAGCGGGTGACGACGCGCGCCGGGCTTCAGTCGCACATTGACCACGTGCACCACGGCCGGCCCTGGCCCCGGCGGCCGAGGCGTCGCGCCGCGGACGACACCTAg
Protein Sequence: MKKCVVKDCRSTDSVPSILFHPFPINHCYRQLWLSRIKLARKLGKRAVVCGLHFKPEDYDERNQLIYNAVPQETGCNSALQTSSSEHIFNNISVGSTLNETLQVIKVDVACRACLAVDCKMFPLTNNKLKQAYTQVTGIAASPDDGLPQLLCWECTSRVLSSARHRARAKKAHAVLTALLSKGCINMDDIRSIDRHQTKLLSSLTHKYFKQNECNMNINNLTELNEPDGLENIDRMYENTEHIDDASEESENSDDNSKHGIDERVKSDIVNQDEIDDKNVVNIFIEIDKIVEKKLNTTDLEQEGKKNRQRKPKRSSNVKGTRGKDGTSKSLQDFFTISNMKLEEEIASVEERKHSVAYINAPFKCEICYRGYSNKESCEAHALKHTEKFGDMECPVCKFRYRTKQDLWCHVNSNHRNRYRCKQCDFVTNTRTTADNHYTFHVGAVFKCPHCPKQFNKKTTYYSHLRLKHACNFPCELCGHTFLSAQGMAMHKRRRHILQNTTSDEGPRCDACDVTFATQAAYDTHLRMSSRHNNDNQRAIVNAYQATPREFDAEGNPRRASRKKRAVTCEQCGVTLDSMYAYSHHFRKKHPAATRTQHAAQRRGAPVVCELCGKKFHCMAILKSHMPIHTGERGFKCGECGKTFPGKLNLDIHQKLHRPSRPTFQCEICQKRFSSSGNLKRHILTHSNATPFECEACGKRVTTRAGLQSHIDHVHHGRPWPRRPRRRAADDT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -