Basic Information

Insect: Aethes cnicana
Gene Symbol: -
Assembly: GCA_963971205.1
Location: OZ020295.1:2795233-2797982[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00016 0.011 16.7 0.5 1 23 276 298 276 298 0.97

2 12 1.1 74 4.7 0.3 5 14 357 366 355 370 0.86

3 12 5e-05 0.0034 18.4 2.2 1 23 384 407 384 407 0.97

4 12 0.00064 0.044 14.9 1.3 1 23 412 434 412 434 0.97

5 12 0.034 2.3 9.5 1.1 2 23 456 478 455 478 0.93

6 12 0.0069 0.47 11.6 2.7 1 23 482 505 482 505 0.97

7 12 0.16 11 7.3 0.3 2 23 528 550 527 550 0.93

8 12 1.1e-05 0.00076 20.4 2.8 1 23 560 582 560 583 0.96

9 12 0.0031 0.21 12.7 1.8 2 23 599 620 598 620 0.96

10 12 0.021 1.5 10.1 1.0 1 23 626 648 626 648 0.95

11 12 0.92 62 4.9 3.4 1 22 654 675 654 678 0.90

12 12 0.37 25 6.2 0.3 2 23 733 754 733 754 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00016	0.011	16.7	0.5	1	23	276	298	276	298	0.97
2	12	1.1	74	4.7	0.3	5	14	357	366	355	370	0.86
3	12	5e-05	0.0034	18.4	2.2	1	23	384	407	384	407	0.97
4	12	0.00064	0.044	14.9	1.3	1	23	412	434	412	434	0.97
5	12	0.034	2.3	9.5	1.1	2	23	456	478	455	478	0.93
6	12	0.0069	0.47	11.6	2.7	1	23	482	505	482	505	0.97
7	12	0.16	11	7.3	0.3	2	23	528	550	527	550	0.93
8	12	1.1e-05	0.00076	20.4	2.8	1	23	560	582	560	583	0.96
9	12	0.0031	0.21	12.7	1.8	2	23	599	620	598	620	0.96
10	12	0.021	1.5	10.1	1.0	1	23	626	648	626	648	0.95
11	12	0.92	62	4.9	3.4	1	22	654	675	654	678	0.90
12	12	0.37	25	6.2	0.3	2	23	733	754	733	754	0.97

Sequence Information

Coding Sequence: ATGGCCTTGGAAAATAATAGCATACAGACAGATTTAAACTATGAACTGACTGAGAGTATAAACATTAAGGAGGAATTAGACAATAATATAGCCATAGAAGATAACAATATAGATTTGCAAGTTAAAACTGAGGACCAGGAAGATAATTTTCAGAGTTTTCAAGTAGAGATCAAACAAGAGCAGGATCCTCCTGTAAACTTCCGCAAATACATAGAGAGCAGGATTCTAGAGGAGTTTAAAGTGCAAAATGAAGGTGACTCGATATTACCGAACACTACTGCCGAAGATGAGGAGACAGCGGTTAAGCAAGAGTGCTTGGCGGATGATGCACTGATCTCTTATGACTTCCCGAGCTTCAATGATGTGGGGAGCATGGACACAGAGAGTGTGGACAGCAATGATGCCACAGCACTCGGAAATGTAGAGACATGCCTTGAAGAAGATGGTGTTggtataaaatatgaaaatgatATCTACAATGACCCTCATTTGAGAGTGAAGGAAGAAGGAGACTTAACAGTGACAGAGACCCATCTAATTTCTAATAAGGTCATCAACACAACATCTACCATCACCAACCCGCAGGACGGGCTCATTCAGTCCCAAACAACCAAAACACTGGTCATGGAAATTCATCCTTTCAACCCATCTCTTGAAGCCAGCGGTCCTTTGAACAAGATAGGAAACCCGGAAGAAATCCTATCCACCCCCACCGAATATGACGACTTTCAATTGAATTCTATTACAGGAAATGAACTTACATTAGAACAGGAAGCTTATGGCCTTTTAAAAGCCAAAAAGCGTAAAGTTAACGTAAACAAGACGTTCCCATGCCCTAAGTGTACAAAAGTGTATAGAGAATATACATCTCTCTCAAGACATTTGGATGTCCATGCAACTATTGAAAATAGGGCCATGGGCGTCATAAAAAGTAGAAAAACCAGGCTTCTCAACAAGATTAAGGCTGAGAAAGAATTTCGCAAGGCTGAAAGGTTGATGATGAAGCAAAAACAGAAAGCCAAGAAGAAACCTGCTGTTGAGACTGTCAAGAAAGAAGGTTATGATTGCACCTGTGGGAAAGTCTTCAGAAGGCGAAGTCGTATGGAGACATGTCTCAGATCTCACAGCTTATTTGCCGAAGTCAAGTCTTATCCGTGTCCAATTTGCACAAAATCGTGCAAGGACAAAACGGAACTCTCATTACACAGAAAACGGCTGCACAGCAGAAAGAAATTCGCCTGCAAATTTTGCCCCACCGATTATAACACGCGCAAAGAATTGTTcaaacatttacaagtgcaccaAAAAGTTCAACTGATGGAGTACAAAGTGATCTCCGAGATTGTCAAAGGAAAGGAGACATTGCAGTGTTTCATGTGTTCAAAGACTTGTGGGGAACTGTCGGAGCTGAAGTCGCATGTCATGGAAGACCATAAAGAGCCATACATATGTCCACATTGTCAGCACACCTTCCCTAAAATTATTGACTTTGCAAATCACACGAAAACATCACATCCTGAAGTTGAAGGACAGTCTGTACTGGATGTATTAGAAGCTTTTTCTAAATTGGTACAAGCATGGAAGTGTGAGGAATGTGAATTGCAATTCCATGAGGCTGACAAACTAGCATTGCACCAGATAGAGAAACACAGTCGGGAAGTGAAATCTGAGCAGCAGTTCCAATGTACAGATTGTCGAAGAGTATTCATTAGTCAGAAAGGGTTGACATCGCATAGGAGAGTCCATCACAATACAGAGGAGGCTGTAGTCAATGAGATTGTGGAGAAAGGTATTATGTGCTTAGAATGCAGAAAGATGTGCAAAGATATGAACGCCTTGACATCCCACATGAGATTACATTCCCCTGATAGGAAGTATCCTTGTAAGTTTTGCGATTTTCGCTTCGCAACGCCGGAGAAGAGGAAAAGTCACTCAGAAATACACACAGGTGATATGAAATATGTGTGCTTCATTTGTGAATATCAATGTACGTCTGAGAATAGGCTGAAACAACACAAACTGTCATCGAAACATTCGAACATGAAAGAATATTTGTTGACAggaaaaattaatgaaaataatgaacaATCTACATCCACATCAACACAGGAGCAAATTAAAGAGTCTCAGAATAAGAGTgttaagaagaaaaagaaagaaaaagacaGACAAAGCACAGAGAAGACATTGCCAGCGACTTGTGAAATTTGTGGTGATCAGTTTTCGAGTGAGAAAGTGATGTTGGAACACAAGCAAACCCATCCATTCATTGAGTTCGCCAATGAGGATACGCCGAGcagaatattttttaagtag
Protein Sequence: MALENNSIQTDLNYELTESINIKEELDNNIAIEDNNIDLQVKTEDQEDNFQSFQVEIKQEQDPPVNFRKYIESRILEEFKVQNEGDSILPNTTAEDEETAVKQECLADDALISYDFPSFNDVGSMDTESVDSNDATALGNVETCLEEDGVGIKYENDIYNDPHLRVKEEGDLTVTETHLISNKVINTTSTITNPQDGLIQSQTTKTLVMEIHPFNPSLEASGPLNKIGNPEEILSTPTEYDDFQLNSITGNELTLEQEAYGLLKAKKRKVNVNKTFPCPKCTKVYREYTSLSRHLDVHATIENRAMGVIKSRKTRLLNKIKAEKEFRKAERLMMKQKQKAKKKPAVETVKKEGYDCTCGKVFRRRSRMETCLRSHSLFAEVKSYPCPICTKSCKDKTELSLHRKRLHSRKKFACKFCPTDYNTRKELFKHLQVHQKVQLMEYKVISEIVKGKETLQCFMCSKTCGELSELKSHVMEDHKEPYICPHCQHTFPKIIDFANHTKTSHPEVEGQSVLDVLEAFSKLVQAWKCEECELQFHEADKLALHQIEKHSREVKSEQQFQCTDCRRVFISQKGLTSHRRVHHNTEEAVVNEIVEKGIMCLECRKMCKDMNALTSHMRLHSPDRKYPCKFCDFRFATPEKRKSHSEIHTGDMKYVCFICEYQCTSENRLKQHKLSSKHSNMKEYLLTGKINENNEQSTSTSTQEQIKESQNKSVKKKKKEKDRQSTEKTLPATCEICGDQFSSEKVMLEHKQTHPFIEFANEDTPSRIFFK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -