Basic Information

Gene Symbol
-
Assembly
GCA_963971205.1
Location
OZ020295.1:8491986-8501204[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 0.0063 0.43 11.7 5.9 1 23 1957 1980 1957 1980 0.97
2 17 0.00068 0.047 14.8 2.1 1 23 1989 2012 1989 2012 0.96
3 17 0.14 9.7 7.5 0.4 2 23 2025 2047 2025 2047 0.97
4 17 0.0061 0.42 11.8 1.8 1 23 2056 2079 2056 2079 0.96
5 17 0.00016 0.011 16.8 1.7 1 23 2091 2114 2091 2114 0.97
6 17 0.00017 0.011 16.7 0.6 2 23 2142 2164 2141 2164 0.97
7 17 0.008 0.54 11.4 0.9 2 23 2174 2196 2173 2196 0.96
8 17 0.24 16 6.8 2.0 3 19 2202 2218 2201 2221 0.93
9 17 0.0018 0.12 13.4 0.9 2 21 2226 2245 2225 2248 0.94
10 17 0.35 24 6.3 1.2 3 23 2258 2279 2257 2279 0.95
11 17 0.0012 0.081 14.0 3.5 1 23 2284 2307 2284 2307 0.94
12 17 0.055 3.7 8.8 0.1 2 23 2319 2341 2318 2341 0.96
13 17 0.066 4.5 8.5 2.8 1 23 2364 2387 2364 2388 0.94
14 17 0.39 27 6.1 0.1 2 23 2394 2415 2393 2415 0.94
15 17 0.27 18 6.6 1.1 2 23 2422 2443 2421 2443 0.97
16 17 0.043 2.9 9.1 0.2 1 23 2509 2531 2509 2531 0.97
17 17 3.4 2.3e+02 3.2 3.1 1 23 2537 2560 2537 2560 0.96

Sequence Information

Coding Sequence
ATGGAAGATCTTCTTAAAACTCAAGGGCAACTTGCCGATGCCATTGAGAAACTATATATCAACTTCAAAAAAGATGGTGCAGAAAGGAAAACTCCTCAGCTCATCAGAAGAAGATTAGAGACCTTGGAGCAATATTGGATCGAGTTCCATAATAATCATATCAAATTAAACGAATACGACAACAAAGAGTTTGTGTATTTCGTTGAAAATCATTTTGATAGAGTATCAAATATTTATAATGAAGCTCGCAGAGCAATGCAGCAGTATATACCAACTAATCAAGAAGATAAACCTATCATAAGACCAGCTACTCCGATTTTTAGTCTGAACACGGACTGGAGTTCCGAGGAACCACCAGCAGCATCCACTTCAGCTGGGGCCACCTCAAAGCCTCCCACCACCTCTCAAACTACTGAGAGAGGAAATCAAAGCAGGTTGGAAGAAATGTACCGTAAGCAGCAGAGCCATTTCAAGGCTTTCCAACGAGCTGTAAACAACATTCATATAGAATCACTCACTGAAAAGTGGGAATTCGAAGATGCGCTAAGAGCATTGCAATCACGATGGTCAGCAGTCGACTCCTTACATTGGGAAATCGATTGTGAGCAAATCAGCGGAAGACCTGGTTATGAAGAATCATACAATCAATGTGAGCAGAAGTACAATGATATCAAGAGGCTTATCAATAGCAAGATGTGGGATTCGTCGCATCGTGAAAGATCCACTCCTGCAATGGAGATACCCACATTTAACGGAAACTATCATCAATGGACATCATTCAAAGACTTATTTTTGGAAACAATCCACAAAAATAACTCCATATCAAAAGCGCAAAAGATGCAATTCTTAAAAGGCAAAGTAAAAGGTGAAGCAGAGAAGCTCATTCAACATCTGAATATCAGCACAGAAAATTATCAAGTTTGTTGGGACATCTTAAATCACCGCTATAATAACAAGAAGCTAATTTTTAGCTCTCATATCAATATCCTGCTCAGTTTACCAACAATGCAGCATCAAGCCGCTCTGCCAATCAAAAAATTACATGACACAACAAAGGAATGTCTTCATGCAATTCAAAATTTGGGCGTGAACACTTCATCATGGGATCCACTCATCGTACACCTACTGGCGCAAAAACTAGATGCAGATTCTCATAATGACTACATTGAACATCTGGAAGAACCTCGAGAGTTACCTACGTTACAAGGTTTCTTAGCCTTTTTGGAAGCAAAATTTACTGCTTTGGAAGCGTCTCGCCGCAAGCAAGAATTGGCCAAGCCAGCACAGTTTTATCAAGAAAGAAAAACTTATTTTCCAAGAACATCACCAAATCAACGTTCATACAATCATTATTACAAAGAAAACAGAAATTATCAAGCCCAACCTAATAAAAGTTATCATACAACGCCGATCAAGAATTATCAAGCATTCGCAACAAAAATGAATACATGTTGGTATTGCAACCTTGAACATGATTTGTTTCGATGCAACAAGTTTCTAGGTATGACACCTGAAACTAAGCTTGCAACAGTTACTTCGCGTAATATATGCACAAATTGTTTATACAAACACTACGGCAACCCGTGTACATCCGAGAAGCGGTGTAAACAATGTAATGGCGAACATAACACGATACTTCATGAAGCTTTCGTCAGCAAGAACAGACCACCCGCTACCGAGCAAAGCGCGGGAAAGAATACCGGACACGTTTCCCAAGATGACGACGCCGAAACTTTGTTATCAACAGCCCAGATCAAAGTTTTATCATCGGATGGGTCTTATATCATATTAAGAGCATTAATTGATCAAGGTTCCCAAATATCACTTATCACCGAAAACGCAGCACAGCGACTCGGTCTGCCACGACAGAATTATAGAGGCTCAGTCTTTGGCATTGGAACCAAAGAAAACAATTGTAAGGGAGTTATCAATATCACAGCAGCATCAATTCACACTGAATACACTTTCAACACGAAAGTCTTTATCATGAATCGACTTATCAACAATTTACCAAACAGATCATTTTCAAAACCATCATGGTCGCATCTGGAAGGAATACAGCTTGCAGATCCCGATTTCAATATCAGTCGCCCAATCGACATTTTATTTGGTGCCGACATTTATTCGAATATCATTTTGAACTCTATTATCAGGGAAAATGACTCACTGCCTATCGCACAACAGTCCCGTCTGGGCTGGATACTATGTGGAAACATGAAATCATATCATTGCAACGTTGTCGTGCACAATATTGAAGATATCAGCAGATTTTGGGAGATAGAGGACATCAATGAAAACTCAAAGGAGCTTTCCTCAGAAGATCAATATTGTATCAATCAATTCAAGACTGAAACTACGCGTCGAGAAGACGGACACTACGTAGTTCGGCTTCCGTTGAAGCCAGATATTGAAGAAAAGCTGGGTGAATCAAAGAAAAAGGCGGTCGCACAGTTTTATCAATTGGAAAATAAGTTTCAAAAAGATGAAAATACAGCAAAAGAATATAAATCATTTATCAACGAATACCTAGAGTTGGGACACATGCGACCGTGTGAAAGTAACACGACGCCAAGTAACTACTTACCACATCATTGTGTGCGCCGTGCTGAATCGACAACTACCGCCCTGCGAGTTGTTTACAACGCGTCCTCGCCGACGTCATCTGGTTACAGTTTAAATGACATGATGTACCGCGGGCCGAATTATCAATCAGATTTGTTATCATTGATTTTGAGATGGAGGCAATACAAAATCGCTTTCACTGCGGACATAGAAAAAATGTTCCGGCAAATATTATGTCACGAGCAAgatcaactttatcaaaaaattaTATGGAGAGATCATCCAAATCAGCCTTTGCGTGAATATGCTCTAACGACAGTCACTTATGGAACAAAGGCGGCACCTTTCTTGGCCATGATGACTCTCAAACAACTGGCAATTGATGAGAGCCACCGATATCCTGAAGCAGCTGAGATACTGAAACAAGACTTCTATATGGATGACCTTCTCAGTGGCAGCCACAGCATAGAAACAGCTAAAAAACTTCAACACGATCTTATCAACTTACTGAAAAGGGGAGGTTTTAACCTACGTAAATGGTGTTCAAACAATTCTGAACTCCTAGAAGAAATGAGCCATACAGAAAACAATCAACAATCATTCGATTTCAAGCATCTCGAATCAAAGAAAACATTGGGACTACGGTGGAGTCCTCAGGAAGATGTGTTTACCTTCCAACTGAAAATAGACATGCCGACATCGAAGAAAATAACTAAGCGTTCACTGTTATCAAATATATCAAAGGTCTTTGATCCTCTGGGTTGGATATGCCCAACGACCACCAAACTAAAGCTACTGTTTCAATCAACCTGGAAGCAGAATTTAGAATGGGACGATCAAGTTCCCCAAGATACCGAAAACGAGTGGCGACAGATCACTGAAAGTTTACACAACATCGATGACATCAAAATTCCCAGATGGATGCAAAACAGCGAAAATGATAACATTGAATTACATGCATTTTGTGACGCATCAGAAAAGGCGTACGCATGCGTTATATATAGCAAGGTTACAAGCAAAAATGAAGGGGAAGATCAATTATCACCAAAAATGACCATCGTAGCCGCCAAATCGAAACTAGTACCTGAAAAGAAAAGCATATCTTTGCCTCGGGTAGAGCTATGCGGGGCTCTATTATTATCAAAACTGTTGAAGAAAGTTGTTGAAAATTTATCAAGCAagaatatcaatattttttgttggaCAGACTCCACAGCTGTCCTTGGCTGGTTACAAGGCGATGTCAACCGCTGGAAACCATTTGTATCAAACAGAGTGACGAAAATAAGGGAAACCATTCCTCCTGAAAGTTGGCGCTATGTAAAATCATCAGAAAACCCGGCAGATTGCGCAAGCCGAGGAATATCAGCATCACAACTGAAAGAAAATGCACTTTGGTGGAAGGGACCCACGTGGCTTCCAACTTATCAAGCAAGGTCACAAGAAACAATTTATACAACAGAGCAAGATATCAAGCTATCAAAACAATCAAACGTCACCACGCTGCATCAAAATAGTGACGTCATCAGGGAATTGATAAACAAACATAGTAATATCAACCGGCTAACACGTGTACTCGCCTGGATACTACGTGCGATATCACGTAACAAACAAAGTGAACCTTATGTCACTATACCGGAGCTTCGAAAAGCAAGAAATATACTTATCAATCATGTTCAACAAGAATCCTTTGCAGAGGAAATTGAAAGTATCAAGCAAGATGGGCATGTAAATTCGAAAAGCAGCATTTTATCACTCAACCCTTTCCTGGACAAAGATGGACTTTTAAGGGTTCGCGGAAGAATACAGAACGCAAATCTTGACTCGAACATGAAGCACCCCATTATCATTCCTCATGAAGGCCACATGACGAATTTACTCATCGAAAATGCCCATAAAATTACTCATCACGGCGGACCACGCCTAACGCTAAGGCAATTGAAATATCAATTTTGGATCATTGGCGGAAACAGAGCAGTAAAAAAGCATATCAGACGTTGTATCAAATGTGTAAAGTTAAAAGCTTTAAAGCAAGACCAAATTATGGGAGACTTACCGGAGGCGCGCTGTAATCCAACTCGACCTTTTTATCATACCGGCGTCGATTACACAGGCTTTGTTGacataaaatcaaataaagGTCGAGGCGTTAAAACAACAAAGGGATATATTGCAGTGTTTGTATGCATGGCCACGAAGGCGGTGCACTTAGAGGTGGTCTCCGACCTCAGCAGCTCAGCATTCCTCGCCGCTCTTCGCCGCTTATCAGCACGTCGAGGAACCCCGCGCCACATGTACAGTGACAACGGGACAAACTTTGTAGGTGCCAGTAGAAGACTGAACCAAGACTTCATTGATTTGAAGAGCACCTTAGACGTCGATTTTTTCACAACAATATCAGAGATGGAGATAGAATGGCATTTCAATGCTCCCTCATGGCCTAGTGCAGGAGGAATTTGGGAGAGTGCCGTTAAAAGTCTGAAACATCATCTTCGTAGAGTCATCGGAGAACAAAAGCTCACCTACGAAGAGTATGCAACACTCCTGGCGCAAGTCGAAGCATGCATGAATTCAAGGCCCTTGTGTGCTATCACAGAAGATCCCGATGACCTTGACTTCCTCACTCCATCGCACTTTTTATCAAGCGGTCCAAATTTAACAATTGTTGAAACAGAGAAGGATTTGCGAACAAGATGGCAGCTTGTACAGAAAACAGTATCAGATATTTGGAAGAGATGGCAATCAGAATATTTATGCCAGCTCTCTATAAGGAGCAAGTGGCAGAAGCCAAGAGAGAACATGAAAGTCGGAGACGTGGTTGTAATTCATGACGCGAATTTACCCGTTGGAAAATGGGCACTGGgaATCAACGAACAGATCCAAAATATGAAAGCAAACGAGATGGAAGGTGTACTAGTTGATAGAATATCAACTCACGACGTTCATCAATTCGCACTCATCTATATCATAGTTGGAGTAGCGATACTATGTGGAATGGTTTATGTATGCCGGCGCTGGCGCCTCCGCTGCTCCTCGTTTACGCCCCCTGCGCCCCCGGGCGACCCAGTGACGGGTCAATCAGTACAGGAGCCCGCCAGAAGAGTCAAACCTGAAGAATCACCACTCTTATTCGCTGAAAACGGTGACTACTTTCTTCAAGGCCCTCACAGCGAGGACAGTCAAGAGCCAGAAGTCAAAATCGAGCAGCAGAATCGCGAAGCCGTCATCCTCACCTTTGAGAGTGTGATCAACGACAAAACAGTTCTTGGGTACAGTCAGGAAGTAGGCCTAGAAGCTGCACCGAATCACGTCTGCAAGATTTGCCATCTAGTTTTCCAATCGCAGAAAACACTGAGAATGCACCAGAAGCGGAAGCACAAAGTGTTCAGACGATCGTTCAAACACATTTGCGATCACTGCGGCATGTCGTATGAAATGAAGAATAGCCTCATAGCGCATATAAGAAGGAAGCATGGACCGGATTCAGCTCAGGATGATAGCGAAGAGCGCACATGTGAAATTTGCGCGCTAGTGTTCAAAGGGATGCCGCGTTTACGAATGCATATGCGCAGAAAACACGGACACTTCGAGGATTCCTTCCAACACGAGTGCAAAGACTGCGGACTAACCTACGATAAGTACAGAAGTCTAATGGTCCATGTTCAAAGGAAGCATTCCAATGTCCCCAAACCAGCGTCAACGCAGTGGTACAAATGTCCGTTTTGCCCTAAAATCTTCACTAAACGAGAGACTTACGCGAGACACGTACAAAGGAAGCATAGGATCAATGATGACGGCGTAGAGGATAATATCACTGAAGAGGGCGTAGAAAGTTGTATCAACAAGGACACCGGTGAAATAACTTGCAAAGAATGTCCTCTAGTCTTCTCTTCTATAAATTACTTGAAGCTACACATGAGAAGAAAACACAACGCCCTAAAAGAAGACTTCAGATTAAAATGTATGATTTGTAATCTGTCTTACGAAAAAATTGAAAGTCTGAAGCGACATGTTCGTAGAAAGCACGACAATGGCGCCCACTGCGATGTCTGCAACAAACAATTTGCCACAAGAAAATCTTATTTAAACCATTCCCATGTGAAAGTAATCAAAGAATGTTCCATTTGTGGTCTCATATTCTCATCCCAGGGCGGTCTGGCGAAGCATTTGCGTTGTAAGCACAAAATAGACACGCCTAAGACCGTGTTTTGCAATATTTGCAATGCAGGTTTTCACGACAAACGTCAATTGAAGCCGCATCTCTTGAAAGTGCATTTGAAAGTGTCGTACACTTGTAGGTATTGTAAGAAAGTATTTAAAGCTAAGGAAAGTTATCGACGTCATATTTTGTTCAAACATCCCGTGTCAAGTCCAACAAAAAGTGAGATGCAGAGTTGTGAACAGTGTCCGGAGGCATTCCTCGATGAATTCGAGCTAAGTCGTCATGTGCGTACGGCGCACCCTAAGATATTGGAATCAGATGAGCCTCTGGTCGAAATAAAAAAGGAAGAGGCTGATGTAAAGCAGTTTCAATGTTCCAAGTGCCCAGAAAATTATCAAGTATGGGAACATCTAAGGTTACACTACGAACAAAACCATCACGTACCGCGGGACACTCAGTGTCAAATTTGTGGGCAGATGGTGCCTTCGAACGAATTGGCAAAACACATCAAACTAGCGCACACCCCCGATCCGCTTCTGGAGTGTAAATATTGTGAGTTCAAAACTACAATAAGAGTGAGCATGACGCAACACATGTTGAGACACCAAAATGCGTCAACCATACGCTGTGAATACCCCGGTTGTAAATTCAAGTCATTTTATGAGGATGCGATGGTGAAGCACAAGAAGAAACATGTGGATCAAGGAGTGAAACTCCAATGTAGTAAATGTCCGTTCCAAACTATGAATAAATACATATTGAGGTACCACGAAGAAGCACACCTAACTGGCAAGAAAAGGTATACCTGTGATCAATGTGACTACGCCACAATATTACCTGCTAATCTAGTGCAGCATAAGTATAAGCACTCAGCGGAGAAACGATTCAAGTGTGAATTCTGCCCATTCGCCACAAAGTATAACACGTCATTACGTTTTCATGTTAAAAAGAAACACTGTGATCTCCCTACTTTAAGTTAA
Protein Sequence
MEDLLKTQGQLADAIEKLYINFKKDGAERKTPQLIRRRLETLEQYWIEFHNNHIKLNEYDNKEFVYFVENHFDRVSNIYNEARRAMQQYIPTNQEDKPIIRPATPIFSLNTDWSSEEPPAASTSAGATSKPPTTSQTTERGNQSRLEEMYRKQQSHFKAFQRAVNNIHIESLTEKWEFEDALRALQSRWSAVDSLHWEIDCEQISGRPGYEESYNQCEQKYNDIKRLINSKMWDSSHRERSTPAMEIPTFNGNYHQWTSFKDLFLETIHKNNSISKAQKMQFLKGKVKGEAEKLIQHLNISTENYQVCWDILNHRYNNKKLIFSSHINILLSLPTMQHQAALPIKKLHDTTKECLHAIQNLGVNTSSWDPLIVHLLAQKLDADSHNDYIEHLEEPRELPTLQGFLAFLEAKFTALEASRRKQELAKPAQFYQERKTYFPRTSPNQRSYNHYYKENRNYQAQPNKSYHTTPIKNYQAFATKMNTCWYCNLEHDLFRCNKFLGMTPETKLATVTSRNICTNCLYKHYGNPCTSEKRCKQCNGEHNTILHEAFVSKNRPPATEQSAGKNTGHVSQDDDAETLLSTAQIKVLSSDGSYIILRALIDQGSQISLITENAAQRLGLPRQNYRGSVFGIGTKENNCKGVINITAASIHTEYTFNTKVFIMNRLINNLPNRSFSKPSWSHLEGIQLADPDFNISRPIDILFGADIYSNIILNSIIRENDSLPIAQQSRLGWILCGNMKSYHCNVVVHNIEDISRFWEIEDINENSKELSSEDQYCINQFKTETTRREDGHYVVRLPLKPDIEEKLGESKKKAVAQFYQLENKFQKDENTAKEYKSFINEYLELGHMRPCESNTTPSNYLPHHCVRRAESTTTALRVVYNASSPTSSGYSLNDMMYRGPNYQSDLLSLILRWRQYKIAFTADIEKMFRQILCHEQDQLYQKIIWRDHPNQPLREYALTTVTYGTKAAPFLAMMTLKQLAIDESHRYPEAAEILKQDFYMDDLLSGSHSIETAKKLQHDLINLLKRGGFNLRKWCSNNSELLEEMSHTENNQQSFDFKHLESKKTLGLRWSPQEDVFTFQLKIDMPTSKKITKRSLLSNISKVFDPLGWICPTTTKLKLLFQSTWKQNLEWDDQVPQDTENEWRQITESLHNIDDIKIPRWMQNSENDNIELHAFCDASEKAYACVIYSKVTSKNEGEDQLSPKMTIVAAKSKLVPEKKSISLPRVELCGALLLSKLLKKVVENLSSKNINIFCWTDSTAVLGWLQGDVNRWKPFVSNRVTKIRETIPPESWRYVKSSENPADCASRGISASQLKENALWWKGPTWLPTYQARSQETIYTTEQDIKLSKQSNVTTLHQNSDVIRELINKHSNINRLTRVLAWILRAISRNKQSEPYVTIPELRKARNILINHVQQESFAEEIESIKQDGHVNSKSSILSLNPFLDKDGLLRVRGRIQNANLDSNMKHPIIIPHEGHMTNLLIENAHKITHHGGPRLTLRQLKYQFWIIGGNRAVKKHIRRCIKCVKLKALKQDQIMGDLPEARCNPTRPFYHTGVDYTGFVDIKSNKGRGVKTTKGYIAVFVCMATKAVHLEVVSDLSSSAFLAALRRLSARRGTPRHMYSDNGTNFVGASRRLNQDFIDLKSTLDVDFFTTISEMEIEWHFNAPSWPSAGGIWESAVKSLKHHLRRVIGEQKLTYEEYATLLAQVEACMNSRPLCAITEDPDDLDFLTPSHFLSSGPNLTIVETEKDLRTRWQLVQKTVSDIWKRWQSEYLCQLSIRSKWQKPRENMKVGDVVVIHDANLPVGKWALGINEQIQNMKANEMEGVLVDRISTHDVHQFALIYIIVGVAILCGMVYVCRRWRLRCSSFTPPAPPGDPVTGQSVQEPARRVKPEESPLLFAENGDYFLQGPHSEDSQEPEVKIEQQNREAVILTFESVINDKTVLGYSQEVGLEAAPNHVCKICHLVFQSQKTLRMHQKRKHKVFRRSFKHICDHCGMSYEMKNSLIAHIRRKHGPDSAQDDSEERTCEICALVFKGMPRLRMHMRRKHGHFEDSFQHECKDCGLTYDKYRSLMVHVQRKHSNVPKPASTQWYKCPFCPKIFTKRETYARHVQRKHRINDDGVEDNITEEGVESCINKDTGEITCKECPLVFSSINYLKLHMRRKHNALKEDFRLKCMICNLSYEKIESLKRHVRRKHDNGAHCDVCNKQFATRKSYLNHSHVKVIKECSICGLIFSSQGGLAKHLRCKHKIDTPKTVFCNICNAGFHDKRQLKPHLLKVHLKVSYTCRYCKKVFKAKESYRRHILFKHPVSSPTKSEMQSCEQCPEAFLDEFELSRHVRTAHPKILESDEPLVEIKKEEADVKQFQCSKCPENYQVWEHLRLHYEQNHHVPRDTQCQICGQMVPSNELAKHIKLAHTPDPLLECKYCEFKTTIRVSMTQHMLRHQNASTIRCEYPGCKFKSFYEDAMVKHKKKHVDQGVKLQCSKCPFQTMNKYILRYHEEAHLTGKKRYTCDQCDYATILPANLVQHKYKHSAEKRFKCEFCPFATKYNTSLRFHVKKKHCDLPTLS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-