Basic Information

Insect: Aethes cnicana
Gene Symbol: zfh1
Assembly: GCA_963971205.1
Location: CAXARK010000591.1:1-5479[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.019 1.3 10.2 0.2 1 23 29 51 29 51 0.94

2 8 6.4e-06 0.00044 21.2 2.8 1 23 62 84 62 84 0.98

3 8 2e-06 0.00013 22.8 6.2 1 23 93 115 93 115 0.99

4 8 0.00014 0.0095 17.0 1.0 1 21 121 141 121 142 0.95

5 8 0.0017 0.11 13.6 0.2 2 21 401 420 400 421 0.92

6 8 1e-05 0.00071 20.5 1.1 1 23 716 738 716 738 0.94

7 8 6.5e-05 0.0044 18.0 7.2 1 23 744 766 744 766 0.98

8 8 0.073 5 8.4 7.1 1 21 772 792 772 793 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.019	1.3	10.2	0.2	1	23	29	51	29	51	0.94
2	8	6.4e-06	0.00044	21.2	2.8	1	23	62	84	62	84	0.98
3	8	2e-06	0.00013	22.8	6.2	1	23	93	115	93	115	0.99
4	8	0.00014	0.0095	17.0	1.0	1	21	121	141	121	142	0.95
5	8	0.0017	0.11	13.6	0.2	2	21	401	420	400	421	0.92
6	8	1e-05	0.00071	20.5	1.1	1	23	716	738	716	738	0.94
7	8	6.5e-05	0.0044	18.0	7.2	1	23	744	766	744	766	0.98
8	8	0.073	5	8.4	7.1	1	21	772	792	772	793	0.96

Sequence Information

Coding Sequence: CGGCCCCTCGCGGGCGGCGGCTCGGAGGGCAAGCCGCCGGAGGAGGAGGACCGCGGGGGCTCGCCGCTGGGCCCCGGCGGGCCCTACGCCTGCTCGCAGTGCCGCGGCGCCTACCCCACGCGCGACCAGCTCGAGCGCCACGAGACGCTGCACTCGCCCAACACTCAGGTGGATACCATCAAATATTCGTGCAAGATCTGCCACAAGAGCTTCGCCAACGTGTACCGCCTGCAGCGGCACATGATCAGCCACGACGAGAGCGCGCTGCTGCGCAAGTTCAAATGCAACGACTGTGACAAAGCCTTCAAGTTCAAGCACCACCTCAAGGAGCACCTCCGCATCCACTCCGGCGAGAAGCCCTTCGAGTGCGCCAACTGCGGAAAAAAGTTCTCCCACTCCGGCTCCTACTCTTCCCACATGACCTCCAAGAAGTGTCTCGTCATGAACCTCAAGATGGGCCGCATCAAGCCCAACAACCCCGCGCTCAACCCCGACCGCAGCCCCTCGCGCAAGCGCGCCAACGCCATGGTCGCCAGCCAGCTCAACAACAACATCGCCCCGAACGGAAGCTCCTTCTTGCCGATCCTCCCCAAATACAATGAGGCGGCGTTCTTCGCCAACATGTCGCAGGAGAACAGCTTCCATCGCTCTCCACTAGGGAGAATGCCGTTTTATATGCCACCGGGAATGCCGATGAGTCCCGCGCACGGTATCACTCCCTGCTTTCCGACGTCACTCAGTCAGCTGTTTGAACAACTTGCTTCGTCGCAATACCAACAGAGAAAAATTGAAAATCAACTAAGTCCGAAGCAGAGCCCACCTCCGGCGGATCCTGAGGACATGATCGAAGAAGTGACTGAAGAAGATGATAAGCGGTCGGAGGGGAGCGCCGAACTAGTGATGGATATAGAGGATGAAGAAGCAATTGCTATCAAAAAAGAACAAGAGGAAAGAGAAAATGAATTCACGTCACCAACTCGTAACTTTGATTCCGTCCACTTAAATAATAATGGCCCAGATGCCGACAACAACCACTCCAATTTTAACACAATATTAGAGTCTGTTAATGCTTCAGTTACGAAGCATTTCTTTAGAGCGAATATGGACAAGATGTCTCCTATGTCGGGTAGTATTTGTCCGAGTATAGAATCACCTCCGACGCCTCATGTTATCATTAAAGATGATCCTGATGAGACGCTTAAGTGTTTAAAATGCAACGCCACCTTCAGAAACAAAGGTGATTTATTGAATCACGAGAAAGTACTCTGTGGAAATTTATTCCGAAAACATGAAGGTTTGGCAGCTCAAGTGGCAGAAACAGTAGCCTTGAATAGACTAGAAGCCGAAATGCGAGCTTCCATTCAAAGCGGAGTGAGTGCTAGCGAAGATGAAGACTTTAGCAGGGAAGAACGCGATGAGAAAACCTCCGTGCATGAAGGTGATAGAAAAATTAGAGTTCGCACGGCCTTAACTGACGAGCAGCAGGCGGTATTGAAAGAGCATTACGTGATCAATCCGAGGCCGAACCGTGAGGAGTTCAAGAGGATTGCACAGCAGATCGGTCTGGACAACCGAGTAGTTCAAGTTTGGTTCCAAAATAATAGAGCCAGAGTACGGAGAATGACTCAGACTGTGGCCGTGTCCGACCAGCCTCTGGACTTGTCGACCAAGAAGTCGGCCGCGTCGGTGACGTCGAGCCCGTCCCCGTCGCCCTGCAGCATCTCCGTCACACATTCCGACTCCGAGGAAGCGGTTAACCTGAGCCAGAAGTCCTCCCGCAGCACGACGCCGCACCGCAACAACTACCTGAGCGCGTATCCACATTCCAATTGCTCTTCATCTTCTTTCACCGACTTCCGACTATCGCCGTCGCCGGGGGAGACTATGGGTCAGAAGCGGCCATTGACTCAGAAGCTGAATCCTACGATACCAATGGACAAGCTTTTGCAGTACAACGACATGGCCCACACGCGGTCTCCCGTGCTCAACATGCACTTGCCGGACGGGCGCGCGGGGCTGAGCCCGGCCTACGAGCGGCCGTGGGGCGAGGACATGCTGGCTCCGGCGGACTACGATGACGAAGGCCCGGTACTTAAGAAGCACAAGCTGAAGCAGGGGGTCGAATTCAAGGAGGGCGAGGGGCAGTTTGTCTGCGACCAATGCGACAAAACCTTCGTCAAACAGAGCTCCCTCGCGCGGCACAAGTACGAACATTCAGGTCAGCGGCCCTACAAGTGCGTGGAGTGCCCCAAGGCGTTCAAGCACAAGCACCACCTCACGGAGCACAAGCGGCTGCACACGGGGGAGAAGCCCTTCCAGTGCTGCAAGTGCTTGAAGAAGTTCTCCCACTCCGGCTCCTACAGCCAGCACATGAACCACCGCTTCGCCATCTGCAAGCCCTACAGGGACTAG
Protein Sequence: RPLAGGGSEGKPPEEEDRGGSPLGPGGPYACSQCRGAYPTRDQLERHETLHSPNTQVDTIKYSCKICHKSFANVYRLQRHMISHDESALLRKFKCNDCDKAFKFKHHLKEHLRIHSGEKPFECANCGKKFSHSGSYSSHMTSKKCLVMNLKMGRIKPNNPALNPDRSPSRKRANAMVASQLNNNIAPNGSSFLPILPKYNEAAFFANMSQENSFHRSPLGRMPFYMPPGMPMSPAHGITPCFPTSLSQLFEQLASSQYQQRKIENQLSPKQSPPPADPEDMIEEVTEEDDKRSEGSAELVMDIEDEEAIAIKKEQEERENEFTSPTRNFDSVHLNNNGPDADNNHSNFNTILESVNASVTKHFFRANMDKMSPMSGSICPSIESPPTPHVIIKDDPDETLKCLKCNATFRNKGDLLNHEKVLCGNLFRKHEGLAAQVAETVALNRLEAEMRASIQSGVSASEDEDFSREERDEKTSVHEGDRKIRVRTALTDEQQAVLKEHYVINPRPNREEFKRIAQQIGLDNRVVQVWFQNNRARVRRMTQTVAVSDQPLDLSTKKSAASVTSSPSPSPCSISVTHSDSEEAVNLSQKSSRSTTPHRNNYLSAYPHSNCSSSSFTDFRLSPSPGETMGQKRPLTQKLNPTIPMDKLLQYNDMAHTRSPVLNMHLPDGRAGLSPAYERPWGEDMLAPADYDDEGPVLKKHKLKQGVEFKEGEGQFVCDQCDKTFVKQSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHTGEKPFQCCKCLKKFSHSGSYSQHMNHRFAICKPYRD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00281695;
90% Identity: iTF_00149268;
80% Identity: iTF_00022689;