Basic Information

Insect: Aethes cnicana
Gene Symbol: -
Assembly: GCA_963971205.1
Location: OZ020298.1:6936712-6948666[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.044 3 9.1 0.1 1 23 121 143 121 143 0.95

2 11 0.00039 0.027 15.5 2.2 1 23 253 275 253 275 0.99

3 11 1.8e-05 0.0012 19.8 0.5 1 23 281 304 281 304 0.97

4 11 0.00094 0.064 14.4 3.7 1 23 309 332 309 332 0.94

5 11 8.5e-06 0.00058 20.8 0.6 2 23 490 511 489 511 0.97

6 11 0.00014 0.0094 17.0 3.1 1 23 517 539 517 539 0.99

7 11 0.11 7.3 7.9 4.4 1 23 591 613 591 613 0.96

8 11 0.29 20 6.5 0.0 2 23 621 642 620 642 0.96

9 11 0.00032 0.022 15.8 1.6 1 23 648 670 648 670 0.97

10 11 0.00049 0.033 15.3 2.9 1 23 676 698 676 698 0.97

11 11 0.001 0.069 14.3 3.1 1 23 707 729 707 729 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.044	3	9.1	0.1	1	23	121	143	121	143	0.95
2	11	0.00039	0.027	15.5	2.2	1	23	253	275	253	275	0.99
3	11	1.8e-05	0.0012	19.8	0.5	1	23	281	304	281	304	0.97
4	11	0.00094	0.064	14.4	3.7	1	23	309	332	309	332	0.94
5	11	8.5e-06	0.00058	20.8	0.6	2	23	490	511	489	511	0.97
6	11	0.00014	0.0094	17.0	3.1	1	23	517	539	517	539	0.99
7	11	0.11	7.3	7.9	4.4	1	23	591	613	591	613	0.96
8	11	0.29	20	6.5	0.0	2	23	621	642	620	642	0.96
9	11	0.00032	0.022	15.8	1.6	1	23	648	670	648	670	0.97
10	11	0.00049	0.033	15.3	2.9	1	23	676	698	676	698	0.97
11	11	0.001	0.069	14.3	3.1	1	23	707	729	707	729	0.98

Sequence Information

Coding Sequence: atggatCACCACATGTCAGCGGAAATCGATCCGTTGAGCACTTATGATTACTCGTCATTCAGTTACCCACATTTGCAATACAACCCGTACCAATATGACATCAAGCTGGAACAACCGCTTATAAATTATATGAACAATAATGTTAGTACAAACCATGCACCGGCAGCTCAGAATGAGATACCGCAAGTTCCGGAAGCACCGCAGGTGGATAACGTTAGTTCCGAGCCAGTTGAAAGTTCTAGCAAAACAGAGACAAGTTCCGAAGTCAAACCACTGTTCGATCTTAATAAAGTCAAGAAAGAAACTGGTAAAAAAAGCAACTATTGGTCACAGAAGATAACCGATGAGAATTTTTCGTTCTACGCTTGCGCGCTATGTAACATAAGCTTTAAACTCCTGAGGGAGCTGGATACACACTTATTAGACCACAAAGAACGGTTAACCAGCTATGATTTGCGAATGAAAAACAAATTAAAGAAGAAAAAGCTCAAAAAGGAACAGAAGAAACTGAAGAAGCTTAAAAAAGAGGTTAAATTAGAAGTGGACATCAAACCGGAGGACGGTTACATTGGGAACGAGAAAGCGGTTGATTTTATGAATGACTCTGTTAATAATGAGGATAATGTTAATCGAGATACTGTAAATAATGTTAAGGAAAATGTTAGTAACGATAAGGCGGAAGGCAAGAATGTCAAAGACAAAGAAATGAAGACTGGCGAGAAGGAAGATGAGTATAATAAGGACCTGGAGAAAATATACAAGTGTTCCGCCTGCCAGAAACAGTTTTCGTTAAGTTACTATTTGAAGTTACACGTCAGATCTCATACAGACGAGAAACCCTATACCTGTAGCGAATGTGGACAGTCGTTCATAACGGCAAGCAAACTCGGGAGGCACAACAAGCGTATCCATCTCGCCATCAAATACCAATGCCGGATATGCTACAAGATCTTCACAAGGTTCGAGTACCTGACGAGGCATTTCGATAAGAAACACGCTGAAGACAAATTGGAGGGGGAACCTTATGattaCAACGCGATCTTGCCTTACCTCAAGGAGCTAGAAGAACAGCTCCGGGAGAAAGCTGAAAAGGAATCCAAGCCGAAGACCGAAGACCTCTGGAACGACTGGCCGGAGCTCGACCAGGACAGAGTCCTCGAGTCGGAGAGGAACGAAGACAGGGAGTCTGCAGTGGCTGTGAACCATCTGGATATCGTCATGGATGACATCAAGATGCCGATGGAAACCACGGAGTTGACGGAAGTGGAGGTGAAAGTGGAGCCGGCGTCGGAACAGGGTGGGGGGGAGGACGACGGCCCCATGGAGCACGACGACGTCAAGGACGAGAGCTGGTCGGACTCGGACTATTTCCCGGAGGACACGTGGGCGGAGCCGCCGAAGGTGGAGGGGGAGCCCCCCTCCCCCCCGCGCAGGGAGGGGCGGCGGGTCAAGCAGGAGGGGCCGCTCACCTGCAAGATATGCGACAAAACCATCAGCACGCCGTCATACATGCGCATACACCTGCGCACGCACACAGGGGAGAAGCCGTATAAATGCTACATTTGTAATAGGGGCTTCATCACTTCGAGCAAAATGCACCGCCACGTGTTGACGCATTCTGACAGCTTGGACAAAGAGGCCGTCAAACAGGAGGTGGATGTCAAGACGGAAACTAACGAAGAAGGAGACAATAACGCCGAAACGAAACCGAAAAAGCTGCGCAAGAAGAGGGCGCCGGAGAAGAAGAAGCGCGACTACCAGAAGCGGCCGCACGCGTGCGAGTTCTGCCAGAAGCGCTTCCTCCACCTGGAGATGCTGCAGGTCCATAAGAGATCTCACGAAGGCGAGAGCGCGGTGGTGAAGTGCTACTACTGCTTGGAGAGCGTGGCGGTGGAGGCGGATCTGAAGGCGCACGAGGCGACGCACACGGGGCCTAAGCCGTTTATGTGCACGATCTGCGGGAAGGGGTACAAGCGGAGAGAGACCATGGTGTACCACAGGAAGAATCATAAATCGGAAAAGAAGTACATCTGCGACATCTGCTCCAAGTGTTTCAACGCGCCGTGCAAGCTGCAGCGCCACATTGTCAGCCACAGAGTGGACAAGTTCGTGCTCCGCTACGAGTGCCCCGTGTGCGCTCACATGTTCAACACCAAGTACCATGTGCAGATGCATCTGACCACGCACCAGAAGGAGGGGCTGTGA
Protein Sequence: MDHHMSAEIDPLSTYDYSSFSYPHLQYNPYQYDIKLEQPLINYMNNNVSTNHAPAAQNEIPQVPEAPQVDNVSSEPVESSSKTETSSEVKPLFDLNKVKKETGKKSNYWSQKITDENFSFYACALCNISFKLLRELDTHLLDHKERLTSYDLRMKNKLKKKKLKKEQKKLKKLKKEVKLEVDIKPEDGYIGNEKAVDFMNDSVNNEDNVNRDTVNNVKENVSNDKAEGKNVKDKEMKTGEKEDEYNKDLEKIYKCSACQKQFSLSYYLKLHVRSHTDEKPYTCSECGQSFITASKLGRHNKRIHLAIKYQCRICYKIFTRFEYLTRHFDKKHAEDKLEGEPYDYNAILPYLKELEEQLREKAEKESKPKTEDLWNDWPELDQDRVLESERNEDRESAVAVNHLDIVMDDIKMPMETTELTEVEVKVEPASEQGGGEDDGPMEHDDVKDESWSDSDYFPEDTWAEPPKVEGEPPSPPRREGRRVKQEGPLTCKICDKTISTPSYMRIHLRTHTGEKPYKCYICNRGFITSSKMHRHVLTHSDSLDKEAVKQEVDVKTETNEEGDNNAETKPKKLRKKRAPEKKKRDYQKRPHACEFCQKRFLHLEMLQVHKRSHEGESAVVKCYYCLESVAVEADLKAHEATHTGPKPFMCTICGKGYKRRETMVYHRKNHKSEKKYICDICSKCFNAPCKLQRHIVSHRVDKFVLRYECPVCAHMFNTKYHVQMHLTTHQKEGL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -