Basic Information

Insect: Aethes cnicana
Gene Symbol: -
Assembly: GCA_963971205.1
Location: OZ020299.1:231604-243028[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 1 69 4.8 0.2 1 23 39 61 39 61 0.93

2 9 0.00023 0.016 16.3 0.5 1 23 176 199 176 199 0.97

3 9 0.00014 0.0095 17.0 1.7 1 23 238 261 238 261 0.97

4 9 0.13 8.9 7.6 1.6 1 23 331 354 331 354 0.96

5 9 0.00054 0.037 15.1 4.2 1 23 383 406 383 406 0.97

6 9 1e-05 0.00069 20.5 0.2 2 23 427 448 426 448 0.97

7 9 7.8e-06 0.00053 20.9 0.5 1 23 454 476 454 476 0.99

8 9 9.8e-06 0.00067 20.6 0.1 1 23 482 504 482 504 0.94

9 9 3.6e-06 0.00025 22.0 0.3 1 23 510 533 510 533 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	1	69	4.8	0.2	1	23	39	61	39	61	0.93
2	9	0.00023	0.016	16.3	0.5	1	23	176	199	176	199	0.97
3	9	0.00014	0.0095	17.0	1.7	1	23	238	261	238	261	0.97
4	9	0.13	8.9	7.6	1.6	1	23	331	354	331	354	0.96
5	9	0.00054	0.037	15.1	4.2	1	23	383	406	383	406	0.97
6	9	1e-05	0.00069	20.5	0.2	2	23	427	448	426	448	0.97
7	9	7.8e-06	0.00053	20.9	0.5	1	23	454	476	454	476	0.99
8	9	9.8e-06	0.00067	20.6	0.1	1	23	482	504	482	504	0.94
9	9	3.6e-06	0.00025	22.0	0.3	1	23	510	533	510	533	0.97

Sequence Information

Coding Sequence: ATGGATAAGAACTCCGTTGCAACACAATACATTATCTGTGAGTGTGGTGATAATTTTCCGAATGAGAAGCTGCTGAATTTCCATCTCGCTAACGATCATGCTGATGTGGATACCTTCCATTGTGAATATTGCCCAGAGATCCTTCCAAGCGCAGAAATCTACGATCGCCACATCAAACAACACAATGCCCAAAAACCGAAGAAGAAACCTCCTCAAAACCCGAAGACAGATACCAAAAACGGCCCATCTCTTAATAACGTGGTCAAAAGGGAGCAAAAATCTCCACCAGTTATTAAAGTTCAGAATTTAAAGCCGATATCCTCTATAAGTTTGATACAAGGTCTGAAAGGCTTCAGTGGACTTTTAAAGGTACACTCTTCTACGGAGGCTCCAGCTTCTGAACAATCGGTAGAAGTGGAGGTTGCACCGGAAAAGACAGCGGAAGAGTCTGCGGAGGTGGTGATAGTGAAAAAAGAGATTGTACAGGATGATGCACCACAGTATGAAGAAGAGGAGGAGATTTATTATCAGTGCGATGTGTGTAACACAATATTCTATACGGAGGCAGATTTCAACGTCCACTACCAGTCCACTCACGCTATGAAGACGGAGGTGACTCCGGAGGACATTCTCGAGAACCATCTGATCTCCGACCACATGGACTCCGTGGGGATCAAAACGGAAGTTGAAGACGTGGAGTCGGCATACTACTATGAATGCGAAATATGCCACAAGATCTTCGCCAGCGAGGATTTCTTCCAAAGCCACTACAACAAGGTGCACGCCAACCTGCTGCCAGCGGATAACGATGTGGAGAACACCCAGGAGCTGCCACCGGAAGACGAGAGTCAAGAAGACTCACTCCAGCCGACAGAATCCCAGGATTACTCCATAGAAGCCTATCAGTCCATGGAGACTATGGATGAAGGTGTAACGGAACCTATAGAGCCTGAAGAAACTAAAGCCCCCGAACCGGAACAAGTGATATACTTCAAATGCGATCTGTGCAAGATTCTGTTCCCAAGCGAAAAGGGCTACAATAGCCACTTCAACAAGAAGCACGGCGTCCTGCAGGCTGGCTTCCAGCTCATCGAGCAGGACCTGGCGGCTCCCTACCCGCCGCCTGCGCACCACAACCAGGACGACTTCTGCTGCGAATTCTGCCCCAAAACGTTCAACATGCGGCGGTCGCTACAGGTGCACCGCAAGCGTGTGCACGCCGACCGCCTCCCGCCCGCGGCTCCCGGCGACGCCGCCCGCGCGCCCAGCCGGAGCAAGGTCTGCGACATATGCGGCCGGGCGTACAACTCCAACGCGGCGCTCCGCTACCACCAAAGACGTCACACCGGAGAGAAACCATACCCTTGCACGATGTGCCCCAAGCGGTTCACCATGCCGATGTTCCTACAGATACATTTGCGGACCCACACGGGGGAGAAGCCTTACGAATGCAACCTGTGCCCGAAGGCTTTCACCAACAAGGCGGCTCTAATAAGACACGACCGGGTCCACACCGGTGTTAAACCCTACCCGTGCCCCGAATGCGGCAAATTCTTCACCCAATCAAACTCAATGAAACTACACGTCAGTACGGTGCACTTGAAACTGCCCGCGCCATACAAGAGCAAGAACAGACGAAACAAGAGCGAAGCCAGGGCGCTGCAGCTAGCGTTAAAGAACATACCCTCGGATTTGATCGAGGAAGACGTTATTGATGAATAG
Protein Sequence: MDKNSVATQYIICECGDNFPNEKLLNFHLANDHADVDTFHCEYCPEILPSAEIYDRHIKQHNAQKPKKKPPQNPKTDTKNGPSLNNVVKREQKSPPVIKVQNLKPISSISLIQGLKGFSGLLKVHSSTEAPASEQSVEVEVAPEKTAEESAEVVIVKKEIVQDDAPQYEEEEEIYYQCDVCNTIFYTEADFNVHYQSTHAMKTEVTPEDILENHLISDHMDSVGIKTEVEDVESAYYYECEICHKIFASEDFFQSHYNKVHANLLPADNDVENTQELPPEDESQEDSLQPTESQDYSIEAYQSMETMDEGVTEPIEPEETKAPEPEQVIYFKCDLCKILFPSEKGYNSHFNKKHGVLQAGFQLIEQDLAAPYPPPAHHNQDDFCCEFCPKTFNMRRSLQVHRKRVHADRLPPAAPGDAARAPSRSKVCDICGRAYNSNAALRYHQRRHTGEKPYPCTMCPKRFTMPMFLQIHLRTHTGEKPYECNLCPKAFTNKAALIRHDRVHTGVKPYPCPECGKFFTQSNSMKLHVSTVHLKLPAPYKSKNRRNKSEARALQLALKNIPSDLIEEDVIDE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -