Acni002940.1
Basic Information
- Insect
- Aethes cnicana
- Gene Symbol
- -
- Assembly
- GCA_963971205.1
- Location
- OZ020272.1:16304986-16333839[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 27 0.0078 0.53 11.5 1.0 1 23 195 217 195 217 0.98 2 27 0.00038 0.026 15.6 1.8 2 21 251 270 250 271 0.92 3 27 0.032 2.2 9.5 0.1 3 23 305 326 303 326 0.96 4 27 6.4e-05 0.0044 18.0 0.6 1 23 377 400 377 400 0.96 5 27 0.039 2.6 9.3 0.2 1 23 423 445 423 445 0.96 6 27 7.4e-05 0.005 17.8 2.4 2 23 478 499 477 499 0.96 7 27 0.0019 0.13 13.4 4.1 2 23 541 563 540 563 0.97 8 27 1 68 4.8 0.1 1 23 613 636 613 636 0.95 9 27 0.0039 0.27 12.4 0.2 1 23 692 714 692 714 0.97 10 27 0.018 1.2 10.3 6.1 2 23 726 747 725 747 0.96 11 27 0.1 7 7.9 1.8 2 23 759 780 758 780 0.96 12 27 0.0041 0.28 12.3 1.0 1 23 790 812 790 812 0.98 13 27 0.00058 0.039 15.0 7.1 1 23 841 863 841 863 0.97 14 27 0.0027 0.18 12.9 2.2 1 23 874 896 874 896 0.98 15 27 7.2e-05 0.0049 17.9 1.1 1 23 904 926 904 926 0.97 16 27 0.0007 0.048 14.7 0.1 2 23 946 968 945 968 0.97 17 27 1.7 1.1e+02 4.1 1.5 1 23 986 1008 986 1008 0.91 18 27 0.081 5.5 8.3 4.2 1 23 1015 1037 1015 1037 0.98 19 27 0.06 4.1 8.7 1.6 2 23 1048 1070 1047 1070 0.95 20 27 0.0039 0.27 12.4 0.3 1 23 1092 1114 1092 1114 0.97 21 27 9.2 6.3e+02 1.8 6.0 2 23 1157 1179 1156 1179 0.94 22 27 0.022 1.5 10.0 0.2 2 23 1195 1216 1194 1216 0.92 23 27 7.8 5.3e+02 2.0 4.7 5 23 1226 1244 1224 1244 0.94 24 27 0.017 1.2 10.4 0.8 2 23 1255 1277 1254 1277 0.95 25 27 0.16 11 7.3 1.6 2 21 1316 1335 1316 1336 0.93 26 27 0.79 54 5.2 1.3 2 23 1384 1405 1383 1405 0.93 27 27 0.0021 0.14 13.3 0.4 2 23 1416 1438 1415 1438 0.94
Sequence Information
- Coding Sequence
- ATGGCTCTCAAGCTGGGAAAATGCAGACTCTGTCTCAAACTCGGTGATTTCTATTCCATCTTCACGGTGGATAACAACGTACAACTTTCAGAAATGGTGATGGACTGCGCTCGTATCAAAgtttttgaaGGAGATGGGCTACCAGACAAGGTGTGCGCCGAATGTATTCAAAAGCTCAGCAGTGCATACATTTTCAAACAGCAATGTGAGCGAGCAGACCAAGAACTGCGGAAAAATTATGTACCCCCACCAGGATTTAGCGGCAGTCCACCACCGCCGAACAGGCAAAGCAGCGAATCTGCCTTTTCAGTCCAGACTGATCATTCTAATCCTACTAAACCACCGTCTGATGTGGACCCTGTAAAGAGAAACGTTCGGAAACGTAGTCACGAGAGTACAGAAAATGCTTCGGTCAGCAGTAAATCGATTGATTTCCGGCCCACAAGTTCAAAGCGTGTAGAGGAACTTAGgaatagtaataaaaaacacAAGGCTAATTATTACGCAGATTCGGACTACGAGGACAACAGCGGCTCCCACTTTTCAGCAGAAACCGATTCTGATGAGCCACTATTAAAAGAATTTAAATGCAAAGTTTGTGCGAAGCAATTTCAATCTATAAAAAGTTTATCAGCACATTCTAGGGTtcatttgcgaaataaaacaaaagacaTATTAACAGAAGATGTGGTTGTCAACATCCCAAAGAATAATATACAAGACCAACAAACAGATGAAAAAGACCAGCTTAGATGCAACAAATGTGGAAAgtcttttaaattgaaaataatgcTGAAGCGTCATCATGATACTTGTCGACAAACCACTCAGAAGTCACCTCCAAAACCTATCACCAAGGAGCTGCTTATATCGTTGGAACCTATCGATGGCATTCATAATAGAAAAATAGATTGCCGAATATGTGCCACCAACTTTCAAACTGTTGAGGACTTGGAAAATCATATGAAAGTGGTTCATGCAGCTGCGGTCCAAAATGTTAAGATTGAGCCTAATCCAGATAATGTTAAAGTGTCAGTACCTTGCATTTACTGCAAGAAACCGTTTGATGACTATTATGTGCATAGTGAACATTTCAGTAAATGCCCTGAGAGTACTGAGACATTAAAATACGAGTGCCCTCTTTGTAAAAAAGTAACATCAAGAAAAGCATCATATTTCCGTCATATCAAAGACGCTCACTTCGAGCCGCGCATGTGGGCTCTGAAGCCCGAGGCGGAATCGGTGTCGACCTCAAAGCAGGAGTTTTTCGAGTGCCGCATGTGCTCAAAGAGATTGGCCACTGAAAAACTGCTTATCACTCATCTGGCAGCGCATGTTTCTAACATCGAAGTTGTAGACGAGGAATCGAGACCGAGTACTATAGAAGACTCGTCGTCGATACCTTCTGACAATAGTGGACCCGGACCTCTACAGTGTAACTACTGCGATAAGAGATTTAAATACAAGAAATCCTTGGTGACACATGAGTTGAAGCATTCCCAAGTAGAAGTGAAGAGGGAACCGGAGGTGCTTCCATCGACGAGCCAGGCGGAGGCGGAGGCGGAGGCGGAGGCGGAGGTGGAGGCGTCGGCGTCGAGCGGCGAGGAGGGCGACGACAAAACCTGCGACATCTGCGAGAAGCAGTTCTCGTACAGGCGCCTGCTGGTGCACCACAAGCGCACCAAGCACAACATGAGCTCTGGCACTAAAAGAGCTAACATTTCTCTCAAAGACTGTCTCGTCCAATGCCTAATATGTGATATTGAAATGAAAGTCAGCGACATCAACGAACATAATCAGAAACACATTCAAATGAACATAAAACCGCGTAATTTGTACACATGTATAGAGTGTGGAGAAAAAGTCAAAAGTCGCACAGTATTGGGTAATCATATTAAACTAGTGCATAGACTGAAACAACTGCCGCCTAAACATTTTGAGGGAGCCGACTTGGCGGATTTTTGTGAGGTCGTTGTGACGAAAGTGGAACCCCTGGATTCGATCCAGAGTCACAACGGCTTTGGCGAGGTTCCCGGCGGACACGAGGGCGCACCATCCGTTGACATGAGCGGTTTCACTTGCACTGTTTGTGGCAAGAATATGCCCAcacttatttcacttaaaagACATGTGAATTGGCATGTAAATGTTGGAAAAAGTCTGGAAAAAAAACTGGAGTGCTTTGTTTGTAAAGAGacGTTCCGGTTTCAATGCCACTACAAGTTACACATGCGGGAACATTACCGTGATACTAATCTTGATCCCAAACTTCTGACTTGCTCTATCTGCAAtcgaaaaagtaaacatttgagAGCGGCACAAGCACATATGAATTTTCACAAACAGACTCGTTTTAAGAATAAAGACTATCAATGTTCAATCTGTAAACGCGTTTTCCAATATCGTAAGGTATATCTGTCTCATATGGCAATACACTACAAGCGAGGTGAGAGCCAAAACACCATTATTGTAGGAGATGCACTGCCGAACACTGTTGACAAAACTGTTTTTGATGGGACTCACACTTGTACTCACTGTGGGAAGGTTTGCGATTCTGAGACTAATTTGAAACATCACATGATATGGCATCGATCGAAGACGCTGCTATATGGCGCACGACATGAGTGTCCCATTTGTCAACTCGTGTTTACCAATAAAAAGAGGCAAGAGTTGCACACTAGAACTCATTTTGAAGACGAAAACGGCCCTTTTAAATGCACGATTTGCGGCAAAGGCTATACTGACGAAAACTACTATAGAAAACATGTCAAGGGACATAATTTTGATCATCAgtctcataaaaaaagaatagaaAAACTGAGAAAAGATAAAGTAAAGTGTCCGATCTGTGTTCGATACTATCCGGACTGGGTGAAGCTAATTCGCCATTTAAGGCGCACGCATCCGGAAAGTAAAATGATAAAACCAGATCCAGACGCGCCTGCGCCGCGCGTGTTCTCGTGCAAACTGTGCGCCAAGACTTTCCTCGACGAGCGGCGACTGCAGCACCACGAGGAGGCCCATCTGCGCAAACCCGAGTTCTTCAAGTGCAAGTTCTGTGGCAAGAAGACTATCTCTCTCAAGAATCACAACGTGCACATCAAGTCGCACTTGGTTACCAAACACACGGATAATCCTCTCAAGTGCCCGCAGTGTGAGGAACATTTCATTAAAGGATATGATTTGCATTACCATTTGAGAGATGTTCACGACATCAATGAGACATGGATTGCAGAACGCACTGAGCAAACATTGAATGGTCCTTTGAAAGAATTTCAATGCTCTATTTGTCTCAAGATACTTGCGAGCAAGGGAAACTATGAGAGACACTTAGATTACCATAATTCTTTGAGATGTAACTATTGTTATGATTACTTTAGTTCTCTTAGGTTCCTGGAAGGCCATTTGACCTTTAGTTGTGACAAAAAGAAGTTGATTGGCGATAGCGAAATATACGCAAGAAAAATTAAATGCCATATCTGCTACAAAGCTTTCCATTTGCAAGTAAAATTAGACTGTCACCTACGTACACAACACGACATAATGGTGTGTAAGGAAGCTTGTAAAAGTAAAAAGGAACTTGTATGTGACTATTGCTTTAGAGTGTTTGAAAATGTTGATGCTCTAATGACTCACAAAGTATACCATCGCACGGTTGGTTATTTTGGCTGCATATACTGTAAAAGAAAATTCGGTACTCTGACACTTTACAAAAAGCATAAGAATCACCACTTTGCACAGTTGAACGTCGATAATCCTACTAAATGCGAACACTGTGATGAGACATTTGTCGCTTTCAGAGAAATGATTTATCACATGAGAGACGTGCATGGCGACAACAAAGAGTGGATCATCATGCCCAAGGAATCCATTGAAGAGTGCTGTCCCATCTGTCACAAAGTGTTCTTCAACTTGCATCGGCACTTGGATTACCATCAAGAGAACCGCTGCAAGAAGTGCGGCGAGTACTTTTATTCTCGCACTGACTACGATAATCATCTGTGCGCCATCGAAAGCGACGAGGAGATGACTAGTGTTGACCAAGACACACGGCCGCAATATGAAGAGTGTCGATTTTGCTTTAAACCCATCACTAGGAAAAGTTCTAAGCGGAAACATGATCAAATTCATAAAGGTTCTGGATCAATTTCTTGTAGATTTTGTTCTTTTAAATTCAAAACTATGGATGCCTTTAACATTCATGCGTTTTCTCACCGAAAtcgtaaatataaaaaaaatcctttaaaATGCCGTAAATGTGGAGAGAAATTTGTACAATATGGACCATTTATAAAGCATATGAAAGATATCCACAAATCTGTTCAAAAAATGCATTATCGAGCTACAGTAAAGGCAGAGAGATGCGTGGTCTGTGGAGACGAGTTCCCCAACCTTCATAACCACTACCGTGCGCATTTGTTGAATCAGTGTTCAGCATGTCTTAAGTACTTCACATCATCCAAAGTGTTCTCCCAGCACGAATGCGACAAGCCAGACTCTGACCCTACCAAAGTGTTTACCAGCAACGCTAATTTACCCTTACTGATCAACACTTATGTTCCGAAAGACGACATGGATGAGCAAAAGTATCATTTTCATAGCAGTGAAATGAACGAGGATAATGAAGAAACTAGTATAAGAGGAATAGTTGACGAGGAGAGCCAGAATTCTATTGAGAATGAATTCTTCCAAGAACAATGTCCCATTATATCGGACGTCCTGTCCCTGCACCCGAAGGAGGAGCCCGTCGAGCTGGAGGAGCAGGcgcgcgcggcgccggcgccgccgcccgctGCGCCCGCCGCCGACGTCGTCATAGACCTATCCGATGACGAGGTGGATGTGGTGCAGCATACTAATAGCTTTCCGACTATTACAATTGATGATTAA
- Protein Sequence
- MALKLGKCRLCLKLGDFYSIFTVDNNVQLSEMVMDCARIKVFEGDGLPDKVCAECIQKLSSAYIFKQQCERADQELRKNYVPPPGFSGSPPPPNRQSSESAFSVQTDHSNPTKPPSDVDPVKRNVRKRSHESTENASVSSKSIDFRPTSSKRVEELRNSNKKHKANYYADSDYEDNSGSHFSAETDSDEPLLKEFKCKVCAKQFQSIKSLSAHSRVHLRNKTKDILTEDVVVNIPKNNIQDQQTDEKDQLRCNKCGKSFKLKIMLKRHHDTCRQTTQKSPPKPITKELLISLEPIDGIHNRKIDCRICATNFQTVEDLENHMKVVHAAAVQNVKIEPNPDNVKVSVPCIYCKKPFDDYYVHSEHFSKCPESTETLKYECPLCKKVTSRKASYFRHIKDAHFEPRMWALKPEAESVSTSKQEFFECRMCSKRLATEKLLITHLAAHVSNIEVVDEESRPSTIEDSSSIPSDNSGPGPLQCNYCDKRFKYKKSLVTHELKHSQVEVKREPEVLPSTSQAEAEAEAEAEVEASASSGEEGDDKTCDICEKQFSYRRLLVHHKRTKHNMSSGTKRANISLKDCLVQCLICDIEMKVSDINEHNQKHIQMNIKPRNLYTCIECGEKVKSRTVLGNHIKLVHRLKQLPPKHFEGADLADFCEVVVTKVEPLDSIQSHNGFGEVPGGHEGAPSVDMSGFTCTVCGKNMPTLISLKRHVNWHVNVGKSLEKKLECFVCKETFRFQCHYKLHMREHYRDTNLDPKLLTCSICNRKSKHLRAAQAHMNFHKQTRFKNKDYQCSICKRVFQYRKVYLSHMAIHYKRGESQNTIIVGDALPNTVDKTVFDGTHTCTHCGKVCDSETNLKHHMIWHRSKTLLYGARHECPICQLVFTNKKRQELHTRTHFEDENGPFKCTICGKGYTDENYYRKHVKGHNFDHQSHKKRIEKLRKDKVKCPICVRYYPDWVKLIRHLRRTHPESKMIKPDPDAPAPRVFSCKLCAKTFLDERRLQHHEEAHLRKPEFFKCKFCGKKTISLKNHNVHIKSHLVTKHTDNPLKCPQCEEHFIKGYDLHYHLRDVHDINETWIAERTEQTLNGPLKEFQCSICLKILASKGNYERHLDYHNSLRCNYCYDYFSSLRFLEGHLTFSCDKKKLIGDSEIYARKIKCHICYKAFHLQVKLDCHLRTQHDIMVCKEACKSKKELVCDYCFRVFENVDALMTHKVYHRTVGYFGCIYCKRKFGTLTLYKKHKNHHFAQLNVDNPTKCEHCDETFVAFREMIYHMRDVHGDNKEWIIMPKESIEECCPICHKVFFNLHRHLDYHQENRCKKCGEYFYSRTDYDNHLCAIESDEEMTSVDQDTRPQYEECRFCFKPITRKSSKRKHDQIHKGSGSISCRFCSFKFKTMDAFNIHAFSHRNRKYKKNPLKCRKCGEKFVQYGPFIKHMKDIHKSVQKMHYRATVKAERCVVCGDEFPNLHNHYRAHLLNQCSACLKYFTSSKVFSQHECDKPDSDPTKVFTSNANLPLLINTYVPKDDMDEQKYHFHSSEMNEDNEETSIRGIVDEESQNSIENEFFQEQCPIISDVLSLHPKEEPVELEEQARAAPAPPPAAPAADVVIDLSDDEVDVVQHTNSFPTITIDD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -