Acni022792.1
Basic Information
- Insect
- Aethes cnicana
- Gene Symbol
- ZNF526
- Assembly
- GCA_963971205.1
- Location
- OZ020297.1:1653216-1668851[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.00013 0.0089 17.0 1.0 1 23 182 204 182 204 0.99 2 11 0.081 5.5 8.3 0.6 1 23 211 233 211 233 0.97 3 11 0.018 1.2 10.3 2.9 1 23 237 260 237 260 0.93 4 11 0.00035 0.024 15.7 3.3 1 22 267 288 267 290 0.89 5 11 4.8e-05 0.0033 18.4 0.9 2 23 296 317 295 318 0.94 6 11 3.4e-06 0.00023 22.0 0.1 1 23 330 352 330 352 0.97 7 11 3.1e-05 0.0021 19.0 1.0 1 21 358 378 358 379 0.96 8 11 0.00017 0.012 16.7 0.8 2 23 392 414 391 414 0.95 9 11 0.00013 0.0088 17.1 0.1 1 23 420 443 420 443 0.97 10 11 1.7e-06 0.00012 23.0 0.3 1 23 452 474 452 474 0.98 11 11 0.00014 0.0099 16.9 0.0 1 23 480 503 480 503 0.96
Sequence Information
- Coding Sequence
- ATGGAGCAGACTGTAATCGGGTCGGAATATTATTGCTTCGGGTGTTTATCGAAGGAGCAAAGTAGGATTTACTGCTATAAACTGTGCAATTCGGTGCTGAAGGCTGTTCTCCAGacGGACACATTATTCCTATGCTATTGGTGCAGACGGAGCTCCAAACAAGCTGAGCTGTTCATACAAAATGTCCAAAGCAATCAGATCCTGCTGCAAAACTTGCATGAAGTAACAGAAGAGAAGCTACAGCCGGCCCGAACCCACCTCAATCCACCATGTCAGCTTGTCTGTTCACCTGTACAAATCCTAGAGATCGAACCCAAAGAATCAGATATAGAGGAAAAGAAAATCAGTATGAGTGAAACGGCAAAGCCCGTGACGACTTTTGACATAAGTGTTGTGGTCAAAGAAGAGATGAAAGAGGAGGGGGTTATGGTCAAAAATGATGGATCTGCCGCATGCAAGGTAGAGACGGTCCATATAACAAGGGACCAGTGCTTGCAAGAGCGCGCCCGCTGGGCGCTGGAGCGTAAATATGTCCTCTCCAACTACAAGTGCGAGGACTGCGTCAAGGGATTCACCTTCAAGGAGGGCTATGACAAACATATGGAGAAGCATAATCtgGACAATGGTGACTATGAATGTGATATATGCAAGCAAAGAATGGGCACTGAGGAGAAGTTAATTAATCATAAAAAGTATCATGAAATACGGTACTGCTGTCCTGTGTGCGGTTATACGTGCTCCACACGTTTGACAGTTAAAGACCACTACATACAAGCACATACAGATCATGATTATAAGCACTGTTGTCCATACTGCTCGAAGAGTTTCAGGCGCCGTTTGTCATGGAGGCGACATATTGGAGCTGTGCACCGACAGAAAAGGGTGACCTGTCAGATTTGCAACAAAACCTACGCTAATAACAACGCGTTGCGAACACACCAGATAGCGCATCACCCGCCAGAAGGCTCGAGCGGCATCCCCAAGCCCTACTCATGCCCGGAGTGCGGGAAGGCGTTCCGAGCCGCCTCCCTGCTTCGGGCGCACGCGACCAAGCACTCTGACAGGCGAGACTACTACTGCGTCGAATGCGACAAGAACTTTAAGTCGGCCACGTCTCTAAAGCATCACCTCAAAGCTGCGGCCGTTCATGCACCCAACGCCGATTTGACGTTATCGTGCGAACACTGCGACATGCGCTTTGCGGTGAGACGCAGTTTGGAGAGGCACGTGAACAGCATTCATTTGAATGTCAAACCTTTCCAGTGCGACCAATGTGAAAAGGCGTACGCGAGCGCATGGTCTCTAACCGACCACAAAAGGCTCATCCACGAGGGATATAAAAAACCTCTACGCTACGCCTGCCCTATGTGCGATAAAGTTTTCCAACAAAACAAGGTCCTCAAAGACCACATCCGTACTCACACCGGGGAGCGGCCGTTTCAATGCAGCATTTGCCCAGCCCAGTTCGCCCAGGCCTCTGTGCTGAAGACCCACATCAATCTCATCCACCTCAAGCTCACGAGAGCTGGAAAACCTAAAGGCGTTGCCACATAA
- Protein Sequence
- MEQTVIGSEYYCFGCLSKEQSRIYCYKLCNSVLKAVLQTDTLFLCYWCRRSSKQAELFIQNVQSNQILLQNLHEVTEEKLQPARTHLNPPCQLVCSPVQILEIEPKESDIEEKKISMSETAKPVTTFDISVVVKEEMKEEGVMVKNDGSAACKVETVHITRDQCLQERARWALERKYVLSNYKCEDCVKGFTFKEGYDKHMEKHNLDNGDYECDICKQRMGTEEKLINHKKYHEIRYCCPVCGYTCSTRLTVKDHYIQAHTDHDYKHCCPYCSKSFRRRLSWRRHIGAVHRQKRVTCQICNKTYANNNALRTHQIAHHPPEGSSGIPKPYSCPECGKAFRAASLLRAHATKHSDRRDYYCVECDKNFKSATSLKHHLKAAAVHAPNADLTLSCEHCDMRFAVRRSLERHVNSIHLNVKPFQCDQCEKAYASAWSLTDHKRLIHEGYKKPLRYACPMCDKVFQQNKVLKDHIRTHTGERPFQCSICPAQFAQASVLKTHINLIHLKLTRAGKPKGVAT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -