Acni023424.1
Basic Information
- Insect
- Aethes cnicana
- Gene Symbol
- -
- Assembly
- GCA_963971205.1
- Location
- OZ020298.1:3517569-3535435[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 26 0.0043 0.29 12.3 0.1 3 23 610 630 608 630 0.97 2 26 3.6e-05 0.0024 18.8 1.8 1 23 634 656 634 656 0.98 3 26 0.045 3.1 9.1 2.3 1 23 689 712 689 712 0.92 4 26 0.034 2.3 9.4 0.0 1 16 718 733 718 735 0.89 5 26 0.034 2.3 9.4 0.0 1 16 758 773 758 775 0.89 6 26 0.034 2.3 9.4 0.0 1 16 798 813 798 815 0.89 7 26 0.034 2.3 9.4 0.0 1 16 838 853 838 855 0.89 8 26 0.034 2.3 9.4 0.0 1 16 878 893 878 895 0.89 9 26 0.034 2.3 9.4 0.0 1 16 918 933 918 935 0.89 10 26 0.034 2.3 9.4 0.0 1 16 958 973 958 975 0.89 11 26 0.034 2.3 9.4 0.0 1 16 998 1013 998 1015 0.89 12 26 0.034 2.3 9.4 0.0 1 16 1038 1053 1038 1055 0.89 13 26 0.034 2.3 9.4 0.0 1 16 1078 1093 1078 1095 0.89 14 26 0.13 8.7 7.6 0.2 1 12 1118 1129 1118 1132 0.88 15 26 0.034 2.3 9.4 0.0 1 16 1158 1173 1158 1175 0.89 16 26 0.13 8.7 7.6 0.2 1 12 1198 1209 1198 1212 0.88 17 26 0.034 2.3 9.4 0.0 1 16 1238 1253 1238 1255 0.89 18 26 0.034 2.3 9.4 0.0 1 16 1278 1293 1278 1295 0.89 19 26 0.54 37 5.7 0.0 1 16 1318 1333 1318 1335 0.89 20 26 0.034 2.3 9.4 0.0 1 16 1358 1373 1358 1375 0.89 21 26 0.034 2.3 9.4 0.0 1 16 1398 1413 1398 1415 0.89 22 26 0.034 2.3 9.4 0.0 1 16 1438 1453 1438 1455 0.89 23 26 0.00076 0.052 14.6 0.1 1 23 1478 1501 1478 1501 0.96 24 26 0.0013 0.088 13.9 0.0 1 20 1507 1526 1507 1527 0.97 25 26 0.0029 0.19 12.8 3.1 1 23 1537 1560 1537 1560 0.96 26 26 0.0029 0.2 12.8 0.6 1 23 1563 1585 1563 1585 0.96
Sequence Information
- Coding Sequence
- ATGTCTCCAGATTACAAGGATAAGTGTTTAGTTTGTCTTAACACCGGCGGCAACTTGAACATATTTACTACATACAATATATACAATGAAAAAGAAGAATTATACGTCGATGTTATCAAGAATTGCTTTAATATTGAGATCACCAAGGATTCCGGCCTCCACGAGATGTGCAACGATTGCAGCCTGAAACTGCGTCACGCCTACATTTTCCGGCACAGCATCATCGGTGCCGTCAACAAGCTGGTTCTCGCTaaagTTTCCGAATGCAGTGATGCGAAATCATATACCGATGTTCATTATTTAGAAGAAATACCATTTGATAACAACTATGAGGTTGATCCAGTACTAGACGAACCTGAACAAACACCTGATTTAGACAAAATCAACGATACCGAAGGCTATTGTATATTTGGTCCAGACAACAATCGTGACGTTCGAGATGAAACGAAAAATGCACATGTTGATAACATCAGCAAGACTGATGGCAAAATCGATTTGAATGAAGATACAGCCAAACCTGATCCTTTACTTAATCTAGATGATAGAGCTCAAACTGATTGTTTGCTTAACCTCGACGATAGAGCGCAAACTGATTCTTTACTTAACCTGGATGAAGAAGCCCAAACTGATTCTATACTTAACCTGGATGAAGAAGCCCAAACTGATTCTTTACTTAACCTGGATGAAGAAGCCCAAACTGATTCTTTACTTAACCTGGATGGAAGAGTCCAAACTGATTCTTTACTTAACCTGGATGAAAGAGCCCATACTGATTCTTTACTTAACCTGGATGGAAGAGTCCAAACTGATTCTTTACTTAACCTGGATGAAAGAGCCCATACTGATTCTTTACTTAACCTGAATGCAAGAGCCCAAACTGATTCTTTACTTAACCTCGAAGATACAGCCAAAACAGATTCTCTGCTTGATCTCGAGAATACAGTCAAAACTGATTCTCTCCTTGATCTCGATGATACTACTCTTATACCTTTTAATATAGACAAAGAAGCAAATcatgatgaaaatgaaataccTTATTTCATGGATTTAGATAATGTTTTACAAGCGAACATGCATATTGCCAATGACGTTATGAAAGATAACGGGGACATTTTAAATGGCCAAGATGGAGCATATTCTCTAAGTATACTAAACGAAAATGATCTGAATACGTTTCTAATGGAAGAAAGTGATATGAAGATATTAAATATAGGTGATAATAGTTTTAAGGATATAGCGAAAGATGACAATGTTATGAATCCAGGGACTGCACCTAGCACTGATGGTATTTACATACCATTCGTTTTTAATCATGAAATtgataaaaatgattttataaaCGTAGCTGACGTTACTGTAAAAGATGTAGATAAAGGTAATAAAGCTAAACCGAAGGCTACTAGAAAAGTGGTTAGAAAGAAAGATAAGAAAACTGATGTAGTAGAAAATCTTGTAAATGATTCCATAgagaaaaataatgaaaataaaacaaatgtaaATACTGCTGTAGACAATTTTGCAAAGAAAGAGAGCCAAACTAAGCCCAAAAAGGCTAGTAAAAGGAAGGCTAAATCAGGCGCTGTACAAGATGAAGCtggaattaaacaaaaaaatgatgaaaataaaaCTGAGTCTTCAATGGGAAATGAGCTTGAGAAAGAGGTGAAAGGCAAGAAGGGAAAGAAAACAGCAAGGAAAGGAAAGAAAGACGCGGATACTGTGAAGGAAAATGTACCCGGAGAAGATGTTAAACctaagaagagaagaagaaaggAACCAGCAGATGATACAGTGACACCGCTCCCCATAACGCCCGGTCAGACCGCGTGTACAGTATGCGACGCACAATTCGAGACGAGCGCCGAATTGTCGGCGCACGGAAAAACCCACCCGCCCGAATTCGTCTGTCCCACCTGCGGGCTCAAGTTTGATAGGAAAACGAAGTTCACAATACACACGAGGACGCACAACGGGCCGTTTTACTGCAAGTTCTGTAAACAGGAATTCGGCAACGTGAACACCCGCAACGCGCACGAGTGGCGAGTGCACTCGAAGCCCGAGCCCTTCAAGTGTGCGCACTGCGGCGAGCGCTTCAAGACCTTCCTCAAGCGCCTCCGCCACCTCCAGGCCGCGCACCAGGACACCACGCAGTACCCCTGCGGCTACTGCGACAAGAGCTTCGCTTATGCCGGTatgttgctagtggtagggttcAAGACCTTCCTCGAGCGCCTCCGCCACCTCCAGGCCGCGCACCAGGACACCACGCAGTACCCCTGCGGCTACTGCGACAAGAGCTTCGCTTATGCCGGTatgttgctagtggtagggttcAAGACCTTCCTCGAGCGCCTCCGCCACCTCCAGGCCGCGCACCAGGACACCACGCAGTACCCCTGCGGCTACTGCGACAAGAGCTTCGCTTATGCCGGTatgttgctagtggtagggttcAAGACCTTCCTCGAGCGCCTCCGCCACCTCCAGGCCGCGCACCAGGACACCACGCAGTACCCCTGCGGCTACTGCGACAAGAGCTTCGCTTATGCCGGTatgttgctagtggtagggttcAAGACCTTCCTCGAGCGCCTCCGCCACCTCCAGGCCGCGCACCAGGACACCACGCAGTACCCCTGCGGCTACTGCGACAAGAGCTTCGCTTATGCCGGTatgttgctagtggtagggttcAAGACCTTCCTCGAGCGCCTCCGCCACCTCCAGGCCGCGCACCAGGACACCACGCAGTACCCCTGCGGCTACTGCGACAAGAGCTTCGCTTATGCCGGTatgttgctagtggtagggttcAAGACCTTCCTCGAGCGCCTCCGCCACCTCCAGGCCGCGCACCAGGACACCACGCAGTACCCCTGCGGCTACTGCGACAAGAGCTTCGCTTATGCCGGTatgttgctagtggtagggttcAAGACCTTCCTCGAGCGCCTCCGCCACCTCCAGGCCGCGCACCAGGACACCACGCAGTACCCCTGCGGCTACTGCGACAAGAGCTTCGCTTATGCCGGTatgttgctagtggtagggttcAAGACCTTCCTCGAGCGCCTCCGCCACCTCCAGGCCGCGCACCAGGACACCACGCAGTACCCCTGCGGCTACTGCGACAAGAGCTTCGCTTATGCCGGTatgttgctagtggtagggttcAAGACCTTCCTCGAGCGCCTCCGCCACCTCCAGGCCGCGCACCAGGACACCACGCAGTACCCCTGCGGCTACTGCGACAAGAGCTTCGCTTATGCCGGTatgttgctagtggtagggttcAAGACCTTCCTCAAGCGCCTCCGCCACCTCCAGGCCGCGCACCAGGACACCACGCAGTACCCCTGCGGCTACTGCGACAAGAGCTTCGCTTATGCCGGTATGTCGCTTGTGGTAGGGTTCAAGACCTTCCTCGAGCGCCTCCGCCACCTCCAGGCCGCGCACCAGGACACCACGCAGTACCCCTGCGGCTACTGCGACAAGAGCTTCGCTTATGCCGGTatgttgctagtggtagggttcAAGACCTTCCTCGAGCGCCTCCGCCACCTCCAGGCCGCGCACCAGGACACCACGCAGTACCCCTGCGGCTACTGCGACAAGAGCTTCGCTTATGCCGGTATGTCGCTTGTGGTAGGGTTCAAGACCTTCCTCGAGCGCCTCCGCCACCTCCAGGCCGCGCACCAGGACACCACGCAGTACCCCTGCGGCTACTGCGACAAGAGCTTCGCTTATGCCGGTatgttgctagtggtagggttcAAGACCTTCCTCGAGCGCCTCCGCCACCTCCAGGCCGCGCACCAGGACACCACGCAGTACCCCTGCGGCTACTGCGACAAGAGCTTCGCTTATGCCGGTatgttgctagtggtagggttcAAGACCTTCCTCGAGCGCCTCCGCCACCTCCAGGCCGCGCACCAGGACACCACGCAGTACCCCTGCGGCTACTGCGTCAAGAGCTTCGCTTATGCCGGTATGTTGCTTGTGGTAGGGTTCAAGACCTTCCTCGAGCGCCTCCGCCACCTCCAGGCCGCGCACCAGGACACCACGCAGTACCCCTGCGGCTACTGCGACAAGAGCTTCGCTTATGCCGGTatgttgctagtggtagggttcAAGACCTTCCTCGAGCGCCTCCGCCACCTCCAGGCCGCGCACCAGGACACCACGCAGTACCCCTGCGGCTACTGCGACAAGAGCTTCGCTTATGCCGGTatgttgctagtggtagggttcAAGACCTTCCTCGAGCGCCTCCGCCACCTCCAGGCCGCGCACCAGGACACCACGCAGTACCCCTGCGGCTACTGCGACAAGAGCTTCGCTTATGCCGGTatgttgctagtggtagggttcAAGACCTTCCTCGAGCGCCTCCGCCACCTCCAGGCCGCGCACCAGGACACCACGCAGTACCCCTGCGGCTACTGCGACAAGAGCTTCGCTTATGccgCGTACAGGTCGAAGCACATAGAGATAGTTCACTTGAACAAGCGGGAGTACAAATGCGAGAAATGCCCCGCCGCGTTCGCACGCCGAGGCGGGCTGGACAGACACATGGCGTGCAAACATGGCATCGGGGACATGAAGTACCAGTGCCACTTGTGCCATCGAAAGTTCTTCGAGCAAACCGCGCTCAGGTGGCATGTGTCGGTGATTCATAATAGGCACGCCTGCACGGACTGTGGAGACAAATTCGAGACGCCGGCGGCCCTCGAGCATCACGCCAAATCGCACAAGTCGGATCTCGACATATCCCTCGGGATAGATTTCTCCACGCTGCCGCTCGACGACTACGGCATTATGGAATCGTCTTACTTTGACTATAACGAACTGGAAGTCTGA
- Protein Sequence
- MSPDYKDKCLVCLNTGGNLNIFTTYNIYNEKEELYVDVIKNCFNIEITKDSGLHEMCNDCSLKLRHAYIFRHSIIGAVNKLVLAKVSECSDAKSYTDVHYLEEIPFDNNYEVDPVLDEPEQTPDLDKINDTEGYCIFGPDNNRDVRDETKNAHVDNISKTDGKIDLNEDTAKPDPLLNLDDRAQTDCLLNLDDRAQTDSLLNLDEEAQTDSILNLDEEAQTDSLLNLDEEAQTDSLLNLDGRVQTDSLLNLDERAHTDSLLNLDGRVQTDSLLNLDERAHTDSLLNLNARAQTDSLLNLEDTAKTDSLLDLENTVKTDSLLDLDDTTLIPFNIDKEANHDENEIPYFMDLDNVLQANMHIANDVMKDNGDILNGQDGAYSLSILNENDLNTFLMEESDMKILNIGDNSFKDIAKDDNVMNPGTAPSTDGIYIPFVFNHEIDKNDFINVADVTVKDVDKGNKAKPKATRKVVRKKDKKTDVVENLVNDSIEKNNENKTNVNTAVDNFAKKESQTKPKKASKRKAKSGAVQDEAGIKQKNDENKTESSMGNELEKEVKGKKGKKTARKGKKDADTVKENVPGEDVKPKKRRRKEPADDTVTPLPITPGQTACTVCDAQFETSAELSAHGKTHPPEFVCPTCGLKFDRKTKFTIHTRTHNGPFYCKFCKQEFGNVNTRNAHEWRVHSKPEPFKCAHCGERFKTFLKRLRHLQAAHQDTTQYPCGYCDKSFAYAGMLLVVGFKTFLERLRHLQAAHQDTTQYPCGYCDKSFAYAGMLLVVGFKTFLERLRHLQAAHQDTTQYPCGYCDKSFAYAGMLLVVGFKTFLERLRHLQAAHQDTTQYPCGYCDKSFAYAGMLLVVGFKTFLERLRHLQAAHQDTTQYPCGYCDKSFAYAGMLLVVGFKTFLERLRHLQAAHQDTTQYPCGYCDKSFAYAGMLLVVGFKTFLERLRHLQAAHQDTTQYPCGYCDKSFAYAGMLLVVGFKTFLERLRHLQAAHQDTTQYPCGYCDKSFAYAGMLLVVGFKTFLERLRHLQAAHQDTTQYPCGYCDKSFAYAGMLLVVGFKTFLERLRHLQAAHQDTTQYPCGYCDKSFAYAGMLLVVGFKTFLKRLRHLQAAHQDTTQYPCGYCDKSFAYAGMSLVVGFKTFLERLRHLQAAHQDTTQYPCGYCDKSFAYAGMLLVVGFKTFLERLRHLQAAHQDTTQYPCGYCDKSFAYAGMSLVVGFKTFLERLRHLQAAHQDTTQYPCGYCDKSFAYAGMLLVVGFKTFLERLRHLQAAHQDTTQYPCGYCDKSFAYAGMLLVVGFKTFLERLRHLQAAHQDTTQYPCGYCVKSFAYAGMLLVVGFKTFLERLRHLQAAHQDTTQYPCGYCDKSFAYAGMLLVVGFKTFLERLRHLQAAHQDTTQYPCGYCDKSFAYAGMLLVVGFKTFLERLRHLQAAHQDTTQYPCGYCDKSFAYAGMLLVVGFKTFLERLRHLQAAHQDTTQYPCGYCDKSFAYAAYRSKHIEIVHLNKREYKCEKCPAAFARRGGLDRHMACKHGIGDMKYQCHLCHRKFFEQTALRWHVSVIHNRHACTDCGDKFETPAALEHHAKSHKSDLDISLGIDFSTLPLDDYGIMESSYFDYNELEV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00022992;
- 90% Identity
- iTF_00022992;
- 80% Identity
- iTF_00022992;