Acni002107.1
Basic Information
- Insect
- Aethes cnicana
- Gene Symbol
- JARID2
- Assembly
- GCA_963971205.1
- Location
- OZ020272.1:2054981-2092100[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2e-17 8e-14 52.4 0.0 9 88 620 696 604 697 0.88 2 2 7 2.8e+04 -4.1 0.0 72 84 1143 1155 1137 1156 0.78
Sequence Information
- Coding Sequence
- ATGAAGCAAAATGGGACAGGTATTCGGCTGGTGCAACGTAAGTTTGCGCAGGGCGTGCCGATTCCCACAAGCCAGATCGCACCCTTGCCGCCCGAGAGGAAAGCTGACCCGCCCAAGGAGGAACGGAAGACCGTCTACCACAGCAGGATGTCGGCCAGAAACCTCCTGGACATCGTGTCCCTGCAAAGTGAGTCCGGCTCTTTATCCCAATACAGATCTCAATCAGGACTCAACGGGCATCTCAGGTGGGTGAACTATAATGTGCACAAGCACAAACAACCCATGGTGTTGCTGCAGCGGCTGCGGGTCAACGACATACCCACCTCATCCCCTCCAACCTTGGTGAGGAACAAACTCAACCAAGCCAAGAAAAACAACATGTGCCTTAGACCGAGGGAGAACCAAACATTTTTGAGGAAGAGGAAGAATAAAGACATTAGAAAAGAGGGTCCACTCAAAAAGCGTCCAGTATTAAAAAGAGAGGAAATCTCATCGGCTACTGACGACGACACCCCACTCCTGTATTTGAGGAAAAACTCACCACGTCAGCCCCCTGGGTCGAATGGGTCCCGACCATCGTTAACTGAAGTGGCGAACGGCTCGATTAAGACAGATGAGAAGGGGAAAGATCGCGTCGTCCAATTCAAGCAACCGGCAGAGACGTCGGCGCTCCGCTACGCGAGGCCTCAGAGAATGAGATCTAATTCTGTATACTTTAGTTTAGggaacGAACGGAGCCCGAGTCGGGGCGAGGCCGCGCGGCGGTCGACGCGACGGGCAGCGAGCGTCGCGAACCCCGAGCCGCCCAGCCACCGGGCGCTGCGCCCTCGCCTGGCAGGATGCGAGTCATGCACCCGCGGAATCCTAACATCAGCGCTAGCTGCCGAGCCACGACGCGCTCCGTCGCCCGAGCCGTGCCCCTCGAAACTGTTCAAATCCGTGCACGCAGTCGTCACAGCGGCAACCAGCTCAAGCCCGAAGCTCGACGCTCGCTGCCGCGAATGCCGCGATTGCGACATCGTCAATAAAATACTGGAACTGAAAGACCTACTGCGCTCGGAAGGCGTCAATCCAGGCGCCATATACGACTCCAACACGGAGTTAGACGAAGCCGTTTGCCCATCGCTATCCACGCTACGCTCGCGTCGCCGACTCTCCCGCTCGGCCGGCGAACACATATATTTAGACATTCTACCTCCGGACACGCCGCATATACTGCAAATCATATGCAAAACGACCGTTGATAAGCGAACGGTGTCAGCCGTCAGGGTCGTTGACCGAGATGTCGCATTTAACACGGAACACCCGACGTTGAAAGAGCATGAAACTCTTATCGACCAATTGCTAGCTTGTATGAGTCGCCGCGCGCAACAAACAGACGACGAGGATCAAAAAGTGACAGAGACGGAGTTGAAACCTGTCAAGTCCTTAAACAAGAAACCTACACGGGAACACGGCAAGAAAGATGTGAATAAGGTTCCTAAGACCAACGGCATCGATAGTGCGAAGCCAGAATCGCCTGACCAGCCCGTTTTGCAACCGGGGAGACCTCTCCCGGGGCCCCCTCAAACTTCGAAGCCGGCGGGGCCCGCGTCGGGGCCTCTCTCGGTACCGTCGGAATCACAAACTGCGGTCGCGTCCGACGTCTTCAAGCTACCCAAAGAAACAAAAGACCCTATAGAGTATTACAAGAAGATCCGTCCGTACGCCTCCAAATACGGCCTCTGCAAGATAGTGCCGCCGGAAGGTTTCTCCTCGCCCTGCGTTCTAGACGATCACATAAGATTCGCAGTTATATATCAATACATTTCGAAACTGTACAATCGCTGGGGGCCGGTGGCGAGGGAACTCGCGGCGATAAAGGTGCTTCTAAGAACCCAGAAGGTGGTTTTCACGAGGGCGCCGCTTCTCAATGGATGCGAGGTGAATCTGCCGAAGTTGTACCACGCTGTGGAGCGTCACGGGGGCCTGACTAAAGTCATCCACCGCAAGCGCTGGGGCCGCGTCGCCGAGGACATGAAGCTGGCCAACCTGCAGAAGCCGGAGAATAAATTGGATAAGATTTACATGCGGTTCCTGCTGCCGTACGCCACTCTCTCCGACAAGGAGCGTCAGGGCATCATGACGAAAGTGGAGAAGTACTGGACCGCGACCAAGTACAGGAAGATGCTCGCGCGCGCTCGGAACCCGCTGCACGCCCAGAACAGGCTGTTGGGGGCCTCGGACTCGTCGTCGGACGAGGGCGACGGGGACACCGCGGGGGCCCTGGAAGAGGCCGAGGACTGCATCACGCAGGGCCGCTCCATGAACCTGGGCAACTTCAGGAAGGTGGCGAAGTCTTTTATGGAGGCGCAATTCCCCTCCGGCCGGCCTGAGACGGCGGAAGTGGAGCGCGCTTATTGGCGCGCCATATTGTTGGGGACGGACCACATAGTGGCCAACACGGCTTCCATAGACACCGGGGAAGAGGGCCACGGGTTCCCGAAGGACCCAGCCGCGCCCTGCGGCACGCACCCGTGGAACCTCAAgATGCTGGCGTCGAACCCGGGCAACGTGCTCCGCTTTCTCGGCCCAGTGTTGGGCGTGACCGTCCCCACGCTCCATCTGAGCATGCTGTACAGCACCTGCTGCTGGCACCGTGACCCCCACGGCTTGCCCTGGGTCGAATACTTACACACCGGCCCGGATAAGATATGGTACGGAATACCGAGTTCGCAGAGCAACAACTTCCGCCGCGCGGTAGAGACTCTCTGCCCGGCGTACTGCCAGAACAAATCGATCTGGCTGGCTTCAGACATCGCCATGATACCGCCGGAGATCCTGAGCGAGCACGGCGTCGCTTTGTCCCGGCTCGAGCAGAAGCCGGGAGAGTTCGTGATGGTCTTCCCGGAGGCGCACTCCTGTTCTGTCACGACGGGATTTAGCGTGTCCGAGAGCGTTTACTTCGCCCCGAACAGCTGGCTCGACACAGTGCATAAACTGTTCCAGGACCTCCGTAGCAGTTGCGAGCCGACGATGTTCTCGCTCGAACAGCTGTTGCTGAACGGGGCCGAGCGGGCGGGCGGCGCCGCGGCGCGCGTGCTAGCGACGCTGCTGCGCACCGAGCTGCGGCATCGGGCCGAGCTGGAGGCTCGCGGCGTGCCGGTGGTGGTACTGGAACCgtcacccgagcaaacctccTGGACTACAGACGAATGCGAGTACTGTCGCGCCTCGCTCTACCTCTCTAAGGTGGTGGGTGTGTCCGCGCGCCGCGCGCCCCTCTGCCCCGAGCACGCGCTGCTGCTGCTGTCACGCGCGCGCATCGACGTCGCGCTCGAACTGCGCTCCGCGTACAGCACGACGGCTCTGCACGCGCTCCTAGCGCGCCTGCCGCGCGGCGGCGCGGCGGAGCCGTGCGCGTGCGACGCACGCGTGGCGCCGCGCTCGCTCTCCAAAACTCTCGAGCGCTTTTACGAGAAATGTGCCGCCTTCAACCTAAGATCAATATCGAATTCGAAAAGTAATGCCCGGTGCGACATCATCCTCGATTACTAG
- Protein Sequence
- MKQNGTGIRLVQRKFAQGVPIPTSQIAPLPPERKADPPKEERKTVYHSRMSARNLLDIVSLQSESGSLSQYRSQSGLNGHLRWVNYNVHKHKQPMVLLQRLRVNDIPTSSPPTLVRNKLNQAKKNNMCLRPRENQTFLRKRKNKDIRKEGPLKKRPVLKREEISSATDDDTPLLYLRKNSPRQPPGSNGSRPSLTEVANGSIKTDEKGKDRVVQFKQPAETSALRYARPQRMRSNSVYFSLGNERSPSRGEAARRSTRRAASVANPEPPSHRALRPRLAGCESCTRGILTSALAAEPRRAPSPEPCPSKLFKSVHAVVTAATSSSPKLDARCRECRDCDIVNKILELKDLLRSEGVNPGAIYDSNTELDEAVCPSLSTLRSRRRLSRSAGEHIYLDILPPDTPHILQIICKTTVDKRTVSAVRVVDRDVAFNTEHPTLKEHETLIDQLLACMSRRAQQTDDEDQKVTETELKPVKSLNKKPTREHGKKDVNKVPKTNGIDSAKPESPDQPVLQPGRPLPGPPQTSKPAGPASGPLSVPSESQTAVASDVFKLPKETKDPIEYYKKIRPYASKYGLCKIVPPEGFSSPCVLDDHIRFAVIYQYISKLYNRWGPVARELAAIKVLLRTQKVVFTRAPLLNGCEVNLPKLYHAVERHGGLTKVIHRKRWGRVAEDMKLANLQKPENKLDKIYMRFLLPYATLSDKERQGIMTKVEKYWTATKYRKMLARARNPLHAQNRLLGASDSSSDEGDGDTAGALEEAEDCITQGRSMNLGNFRKVAKSFMEAQFPSGRPETAEVERAYWRAILLGTDHIVANTASIDTGEEGHGFPKDPAAPCGTHPWNLKMLASNPGNVLRFLGPVLGVTVPTLHLSMLYSTCCWHRDPHGLPWVEYLHTGPDKIWYGIPSSQSNNFRRAVETLCPAYCQNKSIWLASDIAMIPPEILSEHGVALSRLEQKPGEFVMVFPEAHSCSVTTGFSVSESVYFAPNSWLDTVHKLFQDLRSSCEPTMFSLEQLLLNGAERAGGAAARVLATLLRTELRHRAELEARGVPVVVLEPSPEQTSWTTDECEYCRASLYLSKVVGVSARRAPLCPEHALLLLSRARIDVALELRSAYSTTALHALLARLPRGGAAEPCACDARVAPRSLSKTLERFYEKCAAFNLRSISNSKSNARCDIILDY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -