Basic Information

Insect: Aenictocupidus jacobsonorum
Gene Symbol: -
Assembly: GCA_010014765.1
Location: JAAAKC010000776.1:8398410-8400913[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 5.6e-05 0.0065 16.8 0.5 3 23 272 292 270 292 0.94

2 11 1.9e-06 0.00022 21.5 1.2 3 23 440 460 439 460 0.98

3 11 2.8e-05 0.0033 17.8 0.3 1 23 466 488 466 488 0.98

4 11 3.3e-05 0.0038 17.6 2.9 1 23 494 516 494 516 0.98

5 11 3.6e-05 0.0042 17.4 3.2 1 23 522 544 522 544 0.98

6 11 1.4e-06 0.00017 21.8 0.2 1 23 550 572 550 572 0.98

7 11 3.6e-08 4.2e-06 26.9 0.4 1 23 580 602 580 602 0.98

8 11 0.0058 0.68 10.5 0.2 1 23 608 630 608 630 0.93

9 11 8.2e-06 0.00096 19.4 1.3 1 23 636 658 636 658 0.98

10 11 1.4e-05 0.0016 18.7 0.4 1 23 664 686 664 686 0.98

11 11 4.1e-05 0.0048 17.2 0.4 1 23 692 714 692 714 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	5.6e-05	0.0065	16.8	0.5	3	23	272	292	270	292	0.94
2	11	1.9e-06	0.00022	21.5	1.2	3	23	440	460	439	460	0.98
3	11	2.8e-05	0.0033	17.8	0.3	1	23	466	488	466	488	0.98
4	11	3.3e-05	0.0038	17.6	2.9	1	23	494	516	494	516	0.98
5	11	3.6e-05	0.0042	17.4	3.2	1	23	522	544	522	544	0.98
6	11	1.4e-06	0.00017	21.8	0.2	1	23	550	572	550	572	0.98
7	11	3.6e-08	4.2e-06	26.9	0.4	1	23	580	602	580	602	0.98
8	11	0.0058	0.68	10.5	0.2	1	23	608	630	608	630	0.93
9	11	8.2e-06	0.00096	19.4	1.3	1	23	636	658	636	658	0.98
10	11	1.4e-05	0.0016	18.7	0.4	1	23	664	686	664	686	0.98
11	11	4.1e-05	0.0048	17.2	0.4	1	23	692	714	692	714	0.98

Sequence Information

Coding Sequence: ATGGCAGTGTCGGTGGATTCTCCAACAGCGAGATACGGCGATTTATGCCGTTTGTGCGCGACCAAAACAGGAATAATACCTAAAGGCCTGAACATTTTTGCCAATGAGGCGAATTACCGACAAATATTCAAGAAGATTGAAGCCTGCTTGCCATTGCAAATATCTGAGACAGATGTATTGCCTAAAATAGTATGTGAAAACTGTTTGTTCAAAGTTGAGTTACTCTTTGACTTCAGAGAGCGGGCATTGAGGACAGAAGGTGTTCTCATTGAATTATTCAAGCAGCTACACTCACATCCCATGCAAATTCACAATGGCAATCATCACACACAACACATGAAGCTGGATGCTGCTTTGGACCATGTAATCTCTCAACAGAATGGATTGCTAAGTGATAGTTTAGCACATGTCAATGACATGGAATTGCCTCAGCTTTCACATCGAGATAGCATGATTATTTTGTCACAACACAGTGTGCCACTGGATCAACTGAGCCAACATGATATCAATCAGGAGCTTTCCAACCACAGTATAGATGCATCTGAGAGTATACTAGGTGGTCCAAATGGTTACAATGCAATGGATTATCACCATCCATCAATGCTTCATGATGATATCAACTTATCACATGCAAACCTGCATCAGATGAAGAACATGGTGGAGCATGACACTTATGGGGCAATGCCTGATTTGAACCATGTGAAGAATGTTGGTTGTAATGGAGTGCAAAGACTGATGATGAATGAGGCACATTTTATGCATGATAATTTAAATGATGAAGAGAACTTTGATTCATTGAATTCGTACATGTTTTGTACAACATGTGGCAAATCATTTGATGATAAAATATTGCTGCAGCAACACTATGATGAACATTACAGCAAGCCATGTAATGCTTTTACACATGAGAAGGAAATTGACAATGCACATAGGAAAGAACTGCATGGATCTTGCTCGACGATAATTGAGACAAGTAGTAACGTAAAGGAGCAGGAGCATGATTCTCAGAAAATGCATGAAACTCACAGATCAATGTTGAACACACCACCTGAAAGTGAAGATGTGCTTCCAGTGCATCTGGATCTTCCAATAGAACCAGTTGAACCTGAAATCAGACCGCAACGCGAAGGCCTAAAATCGGAGCAATATAGTGATGCAGATAGTGAGATAGCTGATAATAATTTCGATGACAAATTAGACGATATTCCCGAGAGTGGTGTAACGATTGAACCCGAGGAAAATCCGGAACGGCGGGCTGGCCCTGAGCCAAGTGAATGTGAAAATGCgagcaagaaaaagaagtgtgTACCGAAAATATGTACAGTCTGCGGTAAACAGTATAAAACCAACTATAAGTTGATGGAGCACATGCGGAAACACACTGGCGAGCAGCCCTACAAATGCAACAGTTGTGATAAAGGATTTCGATCAAAAATTGGCCTTGCCCAGCACGAAGCCACTCACACAGGACAATATGAATTTTCCTGCTCGACGTGTGGTAAAGGATTCTCCTGTAAGAGTTATCTGATGGTCCATCAACGAGTCCACTCCGACGCGAAGCCGTTTTCTTGCACAACATGTAATCAAAGCTTCAAAACAAAGCAGTCGCTGTTGGATCACACCAACCGCCACTTGGGGCTCAAGCCTTATGCGTGCGAGATATGCCGGCGGAGCTTCATCACCAATGGGCTACTCAAAGCGCATCAGAAGGTCCACACCGGCGCGGACAATCGCAAGTACGCGTGCCCCATCTGCGATAAGATGTTCGTCAGCAAGAGCTACCTGCAGACGCACACGCGTATACATACTGGCGAAAAACCGTTCAAGTGTGACGTCTGCGGAAAGGGGTTCCTCGCACGCGTGGACTTGAAGGTGCACTCAACGATGCACACCGGGGAGAAGTCCTACGTCTGTGAAATGTGCGGCAAGGCGTTCGCACGGCGAGATGCGCTGCGATGCCATCGACGTTCGCATACTGGGGAGAGACCGTACAAGTGTGATATCTGTGGGCAAACTTTTACGCAGTACTCGCCGATGGCGATACACAAGCGGTTGCACACTGGTGAGAGGCCCTACGAGTGCGAGGCCTGCGGCGAGAGGTTCGTATCTCGATCGACGATGATGGCTCATTACAAGAAACACGTGAAGAATGAAGTTAAAAATGAGATACCAGCAGCATCATAG
Protein Sequence: MAVSVDSPTARYGDLCRLCATKTGIIPKGLNIFANEANYRQIFKKIEACLPLQISETDVLPKIVCENCLFKVELLFDFRERALRTEGVLIELFKQLHSHPMQIHNGNHHTQHMKLDAALDHVISQQNGLLSDSLAHVNDMELPQLSHRDSMIILSQHSVPLDQLSQHDINQELSNHSIDASESILGGPNGYNAMDYHHPSMLHDDINLSHANLHQMKNMVEHDTYGAMPDLNHVKNVGCNGVQRLMMNEAHFMHDNLNDEENFDSLNSYMFCTTCGKSFDDKILLQQHYDEHYSKPCNAFTHEKEIDNAHRKELHGSCSTIIETSSNVKEQEHDSQKMHETHRSMLNTPPESEDVLPVHLDLPIEPVEPEIRPQREGLKSEQYSDADSEIADNNFDDKLDDIPESGVTIEPEENPERRAGPEPSECENASKKKKCVPKICTVCGKQYKTNYKLMEHMRKHTGEQPYKCNSCDKGFRSKIGLAQHEATHTGQYEFSCSTCGKGFSCKSYLMVHQRVHSDAKPFSCTTCNQSFKTKQSLLDHTNRHLGLKPYACEICRRSFITNGLLKAHQKVHTGADNRKYACPICDKMFVSKSYLQTHTRIHTGEKPFKCDVCGKGFLARVDLKVHSTMHTGEKSYVCEMCGKAFARRDALRCHRRSHTGERPYKCDICGQTFTQYSPMAIHKRLHTGERPYECEACGERFVSRSTMMAHYKKHVKNEVKNEIPAAS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -