Basic Information

Insect: Aenictocupidus jacobsonorum
Gene Symbol: -
Assembly: GCA_010014765.1
Location: JAAAKC010000079.1:3023962-3027845[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 1.2e-05 0.0014 18.9 2.1 1 23 328 350 328 350 0.97

2 18 4.1e-05 0.0048 17.3 0.8 1 20 356 375 356 378 0.94

3 18 3.6e-06 0.00042 20.6 1.3 1 23 384 406 384 406 0.98

4 18 7.2e-06 0.00085 19.6 4.4 1 21 412 432 412 434 0.95

5 18 1.3e-05 0.0015 18.8 4.6 1 23 440 462 440 462 0.99

6 18 1.3e-05 0.0015 18.8 5.3 1 23 468 490 468 490 0.97

7 18 9.5e-08 1.1e-05 25.5 4.9 1 23 496 518 496 518 0.98

8 18 4.9e-08 5.7e-06 26.5 2.7 1 23 524 546 524 546 0.98

9 18 3.6e-05 0.0042 17.4 6.7 1 23 552 574 552 574 0.97

10 18 4.1e-06 0.00048 20.4 5.6 1 23 580 602 580 602 0.97

11 18 2.3e-07 2.7e-05 24.3 2.8 1 23 608 630 608 630 0.98

12 18 3.2e-06 0.00038 20.7 7.9 1 23 636 658 636 658 0.98

13 18 1.4e-05 0.0016 18.7 9.1 1 23 664 686 664 686 0.98

14 18 8.4e-06 0.00098 19.4 7.7 1 23 692 714 692 714 0.98

15 18 5.4e-06 0.00064 20.0 7.1 1 23 720 742 720 742 0.97

16 18 1.9e-05 0.0023 18.3 0.8 1 23 748 770 748 770 0.98

17 18 0.013 1.5 9.4 5.1 1 23 780 802 780 802 0.98

18 18 8e-07 9.4e-05 22.6 0.8 1 23 808 830 808 830 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	1.2e-05	0.0014	18.9	2.1	1	23	328	350	328	350	0.97
2	18	4.1e-05	0.0048	17.3	0.8	1	20	356	375	356	378	0.94
3	18	3.6e-06	0.00042	20.6	1.3	1	23	384	406	384	406	0.98
4	18	7.2e-06	0.00085	19.6	4.4	1	21	412	432	412	434	0.95
5	18	1.3e-05	0.0015	18.8	4.6	1	23	440	462	440	462	0.99
6	18	1.3e-05	0.0015	18.8	5.3	1	23	468	490	468	490	0.97
7	18	9.5e-08	1.1e-05	25.5	4.9	1	23	496	518	496	518	0.98
8	18	4.9e-08	5.7e-06	26.5	2.7	1	23	524	546	524	546	0.98
9	18	3.6e-05	0.0042	17.4	6.7	1	23	552	574	552	574	0.97
10	18	4.1e-06	0.00048	20.4	5.6	1	23	580	602	580	602	0.97
11	18	2.3e-07	2.7e-05	24.3	2.8	1	23	608	630	608	630	0.98
12	18	3.2e-06	0.00038	20.7	7.9	1	23	636	658	636	658	0.98
13	18	1.4e-05	0.0016	18.7	9.1	1	23	664	686	664	686	0.98
14	18	8.4e-06	0.00098	19.4	7.7	1	23	692	714	692	714	0.98
15	18	5.4e-06	0.00064	20.0	7.1	1	23	720	742	720	742	0.97
16	18	1.9e-05	0.0023	18.3	0.8	1	23	748	770	748	770	0.98
17	18	0.013	1.5	9.4	5.1	1	23	780	802	780	802	0.98
18	18	8e-07	9.4e-05	22.6	0.8	1	23	808	830	808	830	0.96

Sequence Information

Coding Sequence: ATGAACACGGAGGGCTCGCAGGCGCTTCCTGCACACGCAAACAATGGGAACAATGAGGGCTCCACCAGATCACAGACCAGCACCACGACGGCCGTCACCGACCTGCGTGTGAATACGACCGCCCTCAACGCCGTCGCGCTCAGCTCCGTCGCCAAATATTGGGTGCTGACCAACCTACTGCCAGGACCAATACCACAAGTGTCTGTTTACGGATTGCCTGGATCCGCGTCACGCAACGACAACCAAAAACTATCTCAAGATTCAACTGTGGCTCAACACCCAAGTGTTGGAGGCCTCATCCAACCTGACAACATCCTCCTTTCGCATAATGCGAACCTAGCTGTGCCTACAAGTACAATGCACTTGGACGCCTCCGCCAATAGCCAACTGAACAATCACCAGTCGAATGCACTAGTTgccagccagcagcagcacggcCAGCTGCAGTCGGCGCCCAACATGGTCCAGGTGCAAGTGCAGGACAACATGGTGTCGACTGCTGAGCcaggcggcagcgcgccgggcggcgctaGTGCCACCGGGGAGCAGATGCACGATATCAAGGACGAGAAGGCGATGCAAAGCGCCACCAAGTTCCTCTCCGCGCAGTTCGGCTTGCAGGACATTAAGCCGAACCTGATGGACGTGCGCACCGCTGATGGCAGCATCGTCAAGATCTCCACCGGGCTGCCCGATCAGGATCTCGCCAAGACGATTGGTGTGGAGATGGTGCAGAACATGTTCAAGGTGAACGTCGACGACTTCAACCAGCTGCTGGCGTACCACGAGGTCTTTGGGAAGATACAGACTGAGCCGGCGCCCGGCACGCTCGTGCAAGGCGGGCAGAATCAGCAGGGCGCTAGTTTGCAGGGCGGCGTAGTGAACAACATCGCCACCGTGCCAAAGGTTCTGGAGAATGATCAGGAGGCTTCCACCAGCGGAATCAACTCTGAGAACTCACCTACTATCATTGCAGGCACACATGTTTGTGATATCTGTGGAAAAATGTTCCAATTTCGTTACCAACTAATAGTCCATCGTCGTTACCACACAGAACGCAAGCCGTTCACCTGCCAGGTGTGCGGCAAGGCGTTCCCGAACGCCGGCGAGCTCAGCCGCCACGGCAAGTGCCACCTCGGCGGCAGCATGTTCACGTGCAGCGTGTGCTTCCACGTGTTTGCCAACGCGGCGTCGCTGGAGCGCCACATGAAGCGCCACTCCACCGACAAGCCGTACAACTGCACCGTGTGCGGCAAATCGTTCGCGCGCAAGGAGCACCTGGAGAACCACACGCGTTGCCACACCGGCGAGACGCCCTACCGCTGCCAGTACTGTGCGAAGACGTTCACGCGCAAGGAGCACATGGTGAACCACGTGCGCAAGCACACCGGCGAGACGCCGCACCGCTGCGACATCTGCAAGAAGAGCTTCACGCGCAAGGAGCACTTCATGAACCACGTGATGTGgcacaccggcgaaacgcCGCACCAGTGCAACATCTGCGGCAAGAAGTACACGCGCAAGGAGCACCTCGCGAACCACATGCGCTCGCACACCAACGACACGCCCTTCCGCTGCGAGATCTGCGGCAAGTCGTTCACGCGCAAGGAGCACTTCACGAACCACATCATGTGGCATACGGGCGAGACGCCGCATCGCTGCGACTTCTGCTCGAAGACGTTCACGCGCAAGGAGCACCTGCTGAACCACGTGCGCCAGCACACGGGCGAGTCGCCGCACCGCTGCGGCTACTGCTCGAAGAGCTTCACGCGCAAGGAGCACCTCATCAACCACGTGCGGCAGCACACTGGTGAGACGCCCTTCCGCTGCAGCTACTGCCCCAAGGCGTTCACGCGCAAGGACCACCTAGTGAACCACGTGCGCCAGCACACCGGCGAGTCGCCGCACAAGTGCACATACTGCACGAAGAGCTTCACGCGCAAGGAGCACCTCACCAACCACGTGCGGCAGCACACCGGTGAGTCGCCGCACCGCTGCCACTTCTGCTCGAAGAGTTTCACGCGCAAGGAGCACCTCACCAACCACGTGCGGATACATACGGGCGAGTCGCCGCACCGCTGCGAGTTCTGCCAGAAGACGTTCACGCGCAAGGAGCACCTCACCAACCACCTGCGGCAGCACACCGGCGAGACGCCGCACTGCTGCAACGTCTGCAGCAAGCCCTTCACACGCAAGGAGCACCTCATCAATCACATGCGCTCGCACACAGGAGAGCGGCCGTTCAGCTGCAACGAGTGCGGCAAGTCGTTCCCCCTCAAGGGCAACCTGCTGTTCCACCAGCGCTCGCACAACAAGGGCGCGCAGGCGGAGCGGCCCTTCCGGTGCGACCTCTGCGATAAAGACTTCATGTGCAAGGGGCATCTAGTCTCGCATCGGCGCTCTCACAGCGGCGAACGTCCGCACGCCTGTCCCGACTGTGGACGGACGTTCGTCGAGAAGGGCAATATGCTCAGGCATCTGCGCAAGCATCAGCAGGAACTCCCAGCGAACGCGGCGCCCATCGTCGAGATCCAAATCCAACAGCCACCGATCTCGGTGTCGACGAGCGCCGGCAGCATGCAGGCGCAGGCCGCGCAGCCGACGTCCGTCGCCAGCGGCTCCATCCTCCAGCAAACGCTGATGCACCCAGCGAACGCGCACCCCGTGCCCAGCGTGCCGACCGCCAACGGCAACGTGCTGGCTACTTACTGA
Protein Sequence: MNTEGSQALPAHANNGNNEGSTRSQTSTTTAVTDLRVNTTALNAVALSSVAKYWVLTNLLPGPIPQVSVYGLPGSASRNDNQKLSQDSTVAQHPSVGGLIQPDNILLSHNANLAVPTSTMHLDASANSQLNNHQSNALVASQQQHGQLQSAPNMVQVQVQDNMVSTAEPGGSAPGGASATGEQMHDIKDEKAMQSATKFLSAQFGLQDIKPNLMDVRTADGSIVKISTGLPDQDLAKTIGVEMVQNMFKVNVDDFNQLLAYHEVFGKIQTEPAPGTLVQGGQNQQGASLQGGVVNNIATVPKVLENDQEASTSGINSENSPTIIAGTHVCDICGKMFQFRYQLIVHRRYHTERKPFTCQVCGKAFPNAGELSRHGKCHLGGSMFTCSVCFHVFANAASLERHMKRHSTDKPYNCTVCGKSFARKEHLENHTRCHTGETPYRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHQCNICGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCGYCSKSFTRKEHLINHVRQHTGETPFRCSYCPKAFTRKDHLVNHVRQHTGESPHKCTYCTKSFTRKEHLTNHVRQHTGESPHRCHFCSKSFTRKEHLTNHVRIHTGESPHRCEFCQKTFTRKEHLTNHLRQHTGETPHCCNVCSKPFTRKEHLINHMRSHTGERPFSCNECGKSFPLKGNLLFHQRSHNKGAQAERPFRCDLCDKDFMCKGHLVSHRRSHSGERPHACPDCGRTFVEKGNMLRHLRKHQQELPANAAPIVEIQIQQPPISVSTSAGSMQAQAAQPTSVASGSILQQTLMHPANAHPVPSVPTANGNVLATY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00904250;
90% Identity: -
80% Identity: -