Basic Information

Gene Symbol
Xbp1
Assembly
GCA_010014765.1
Location
JAAAKC010000188.1:16316-17986[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.2e-12 1.3e-09 37.9 18.5 2 63 18 86 18 94 0.92
2 3 0.63 6.9e+02 0.3 1.0 16 29 241 254 239 259 0.69
3 3 2.4 2.6e+03 -1.6 0.3 49 61 313 325 310 327 0.42

Sequence Information

Coding Sequence
ATGGACTCGTTCGTCAGGCCACGCAAGAGGCGCTTAGATCATCTGACATGGGAAGAAAAGGTTCAACGCAAAAAGCTGAAGaatcgcgtcgcggcgcagaCGTCCCGCGACCGCAAGAAGGCCAAATTGGAGCAGCTCGAGGAGAACTTCGACAAGCTGATGGCACAGAATgagctcgcgctcgccgagtgCGAGAAGCTCAAGCAGATGAACGCGACGCTGAGCCGCGAAAACGCCGAGCTGCGGCAGGCGCTGCGCTTGCGGCAGTCGGAGTGCCCCAGCTGCGAGCTGCGCGAGCTGCAGCATgagcaccagcgccgcgccgccgaGAGCGGCTgcacgctcggcggcggcgctggcgccccGCACCGTGGCGCTGAGGATGCTGCTGGCATGCCTTCTCTGCAGGACCTCCTCGACGAGCTCAACAAGGACGTCGACGCTGGCGGCCTGGACGAGCTCACCCAAAGCCTGCTCGCAGATATCGTCCTCAATCTTGATGCGGTGGATCACGATGCTAAATCGCAGCGCTCGATTGGTGAATCCACGCACGCTGGAGAAGTGGTGGGGACGACATCAGAACAGCTGGAATCCGATGGAGATGGCGGCCGCGTAAAGCGCGAGCCCACCGGCAGCTGCACGCACCAGCGCGAGCTCGCCGAGTTTCTACTTCTGCACCACGACTATAGCTGCAAACCGACGCAGGCAGCCGCGAGGACAGCAGCCACATCACGTGTGAAGCGCAAACGGGAGAAGAAACGAACGCTGCAGCCAATCAGACCCAAGGCGACGGCGACACCAGctgaaacaacaataacaaccaCTACCGCTCGGTGCGCGCAATCATCGGCAACGCCAACGACAGTGAATACCGACCTGCTGCGCGGATACTACGACGAGGCGGAAAACTGCATCACGATCATCATCGACGAGGAGCAGGATGTACAAGAAACGGTGGCACAACTGCAGCGGCAGATTCAGATCAAGGACGCCGACGCGAACAACTTCAATGGCGGCCTGCTCAACGTCCCGAGCGCCACCTGCCCGCCGAGCGTCGGTAATACAGGCACCGTCGGCGGTGGCTTCTCGCCGAGCGCCTCTGATTGCGGCTACGAGTCGCTGGGATCGCCTGGTGGTTTCAACGATGACTTGTTCGACTGCAGCGTCTCTGAACTTTTCCCACAACTGATCTAA
Protein Sequence
MDSFVRPRKRRLDHLTWEEKVQRKKLKNRVAAQTSRDRKKAKLEQLEENFDKLMAQNELALAECEKLKQMNATLSRENAELRQALRLRQSECPSCELRELQHEHQRRAAESGCTLGGGAGAPHRGAEDAAGMPSLQDLLDELNKDVDAGGLDELTQSLLADIVLNLDAVDHDAKSQRSIGESTHAGEVVGTTSEQLESDGDGGRVKREPTGSCTHQRELAEFLLLHHDYSCKPTQAAARTAATSRVKRKREKKRTLQPIRPKATATPAETTITTTTARCAQSSATPTTVNTDLLRGYYDEAENCITIIIDEEQDVQETVAQLQRQIQIKDADANNFNGGLLNVPSATCPPSVGNTGTVGGGFSPSASDCGYESLGSPGGFNDDLFDCSVSELFPQLI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-