Ahon014191.1
Basic Information
- Insect
- Adoxophyes honmai
- Gene Symbol
- -
- Assembly
- GCA_005406045.1
- Location
- BHDV01007801.1:29921-34130[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.55 31 5.5 0.6 2 23 477 498 476 498 0.96 2 14 0.49 28 5.6 0.0 2 23 505 527 505 527 0.96 3 14 3.2 1.8e+02 3.1 0.2 2 23 533 554 532 554 0.90 4 14 0.00036 0.02 15.5 0.6 1 23 630 653 630 653 0.97 5 14 1.9 1.1e+02 3.8 1.6 1 23 659 682 659 682 0.90 6 14 0.091 5.1 7.9 3.3 2 21 684 703 684 704 0.93 7 14 0.091 5.2 7.9 0.7 1 21 711 730 711 731 0.88 8 14 0.76 43 5.0 0.0 1 19 773 791 773 795 0.94 9 14 0.0073 0.41 11.4 4.6 1 23 799 821 799 821 0.97 10 14 0.49 28 5.6 2.2 2 23 828 849 827 849 0.97 11 14 6.3 3.6e+02 2.1 2.3 2 23 854 874 854 874 0.89 12 14 0.043 2.5 8.9 0.7 1 23 881 904 881 904 0.96 13 14 0.00028 0.016 15.8 5.2 1 23 910 932 910 932 0.98 14 14 5e-05 0.0028 18.2 1.1 2 23 937 958 937 958 0.98
Sequence Information
- Coding Sequence
- ATGACTTTAATCACTATGAATCAAATGAAAACTTTAAGAGTGAACAGAAAATGGCACCAAACAGTTATGAAGTTACTACTGGGAAAGGACATGTGTGGATCATGTTTGTGTTCAGATGAAGATCTTACCCATTGGGATTCGAGTTTTGTGCTACAATTGGACGAAACCGAAGTGGAATGTACTTTGAAGAATGTTATGATGTACACCTTTGGGTCTAGTATTCTCAACATCATTTCCACCTCAAAATTCTGTCAAAAATGCATAGACATCATACTGAAAGCATATTTGCTACTTCACGAAATACAGCAGAATTACAGACACATACAAAAAAGGCTTACAGAAGTATCAACACAAATGAAGTGGACGCAACACTTGAATGAGACTGGTTCGTTGAACGAATTCAATGTTAATGATTTAGTTGATTCATGTAATAACTTAACATCCAATACTATGGCAATGGAAAAGAAAATGTACAGAATTACTCTTAATGATGAATCACTCAAACACAAACTGATACAAGATCCTAAAATGcacaagtatttaattaaaaagaaaaacattaaggACACAAAACTGCCTGCGGGGATCACTGTGAAAAGAATACAGACAGATATAGAAATTGCTGACTTTGAACCACATGAGCTACTGGAATTAAACTGGGCCGAAGACACAGATTACGATTCAGCTATTCCTAATTCACATGTTCCTAAAACCGTCCTGCACAGCAATGAAGCTTTAATAATGGACCTCATGGAGAAAGCAAAGAATGTTAATCACAAGATATACAATAACAGTTTCAATCAACATGAAATTCTTGATAGATTACCGGATTCACTCTCCGTCAACTTGATAAGCAGGCCCATAAATGGTCTCGCAAATAAAACAGACTTTATGGCTCAGGATTCATTAGAAACAAAATGGTctgaaaaacaaaagcaaacaaaacaatttataaagataccTGTCAAAAAGCTCAATTTTAATGAAGGATTGACGGTCAAATTTATTCCGAAACATAAAATGTGTCAGTTACAGGAGAGTATGACTGATGTGGCACCCTATGAATTGCTGGAACTAAATTGGAATGAAGAAACTGAAAATGGGTTGCAAAATGTAGAACCTGATATCAACGAGAAACATAATATTGATCTTACCAAGTGGCTAGAAGATCAAGGAATGAGCACTATAGGGTCCAACAAAGATAGCATTAATGCAGAAAGTATGAACATTCAGGAAATCGCAGAAAATGCAAACAATTCACtaacatctgaaaataaaaatgctttGGACAAAAGTGGTTGTCATGATATTATTAATGTAGATGAAATTAAGTCTGAGAAATTTGAAATTCAGGGAGACGGGTCTGATTTCAATGTAAATGTTGAAATTGAACCAGTAAATGAATCACATGAAAACAAAACTGACATTAGATGCGCACTTTGTAATTCTTTGTTTGATGATTTTAATGCATACACCAACCATTATAAAACGCATAATATAATTGAATCAGCTAAGTGTTACATGTGCCCTATGCAGTTTGCAGTCATTGAATTACTGTCCGAGCATTTGCTTTCCGcacatttacaaaatatatcATATTGTAATGTTTGTTTCGCTATGCTAAGCCAGGACAAACTAGCAGAACACATGTCCATTTACCATGCCAAGATAGTTGAAGTGATAAATGCACCTAATGTTAAAAATGAGGAAAGCACAGTTTTAAGACTGTCTGATTTTTGCAAGAAATGTAAGCAGCCTTTAAACACTTCATCGGAGCCTCATGTATGTGTAGAAGCCAGGTCTCGGTGTAAAGAATGCAAACATGGTTGCATACATGAGAGATACTTGGCTTCGTACCGTGACCAACTGAGAGCAAAGCCAGAAATATTCAAATGTCCCGACTGTGATTATCAATACAAAACGAAACGGGAAATTATCCAGCACGCGAATAAAGTCCATTTAGAAAACAAACCACACGTTTGCAAGCAATGCAACCTtggctttttattaaaaacgtcTCTGGCTAGACACAACAATCTGTATCACGCGAGATGCGAAACTTGCCGTAGAGTGTTCAAAGACACAGATACGATGAATAAACACAAGTGTAGTTCGGGACCGAGGAATAATTACAAATGTGAATTATGCGGGCAAGGTTTTACTGAAACGAAATATGAACAGCACAAGCAAACGGCCTTACTTGCCCCAGACACTTGCCTCATCTGCCATCAGCCCATACCAATCAAATGTAATATGTCCAGACATTTGCTAGATTTGCACAACCTCAGCTTGAAGAAAGGGCTTGACAGGATAGTATACGAATGTGTTATCTGCGAGGTTGATTTCAATGATATGGCAGATTATTCGAAACATGCTTGGGTGCATACTGGTGTGCATGAATGCCATATTTGTGCGAAGAGGTTTAGCTCCCGAGTCCTCTACGACACCCATTACAAGATGCATGTAACTGCCCAgaaattaaaatgttacatCTGCAACGAACAACAGACTGACAAACATGCTTATTCACAACATTTGCAAACCCACGGAGACTATGGAAAGTGTACGGTTTGTTCTAAGTTTGTTAAGCATGAAAGCATAAACGAGCATATGAAAGAGCATGAGACTACTGGTAATAAATTCCAATGCCCCCACTGCTCTTTAGTAAGCAGTAGTGCAAGTCAGTCTGAAGTTCATGTCAACCGATTTCATTTACAAACTCGTCCGTATCAGTGTGATGTGTGTAAAAAAAGGTTCTACAGCAAGCACTTGATGCGCACTCATATTTCAAAGCATTATGGCAAAGAGAAGTGTACTCTTTGCGATAGGAAGTTTGCAAAAAAGTGGTATTTGGAGATGCATATgaaagtacacgaaaatacgACGGCTTCTAACTTCTAA
- Protein Sequence
- MTLITMNQMKTLRVNRKWHQTVMKLLLGKDMCGSCLCSDEDLTHWDSSFVLQLDETEVECTLKNVMMYTFGSSILNIISTSKFCQKCIDIILKAYLLLHEIQQNYRHIQKRLTEVSTQMKWTQHLNETGSLNEFNVNDLVDSCNNLTSNTMAMEKKMYRITLNDESLKHKLIQDPKMHKYLIKKKNIKDTKLPAGITVKRIQTDIEIADFEPHELLELNWAEDTDYDSAIPNSHVPKTVLHSNEALIMDLMEKAKNVNHKIYNNSFNQHEILDRLPDSLSVNLISRPINGLANKTDFMAQDSLETKWSEKQKQTKQFIKIPVKKLNFNEGLTVKFIPKHKMCQLQESMTDVAPYELLELNWNEETENGLQNVEPDINEKHNIDLTKWLEDQGMSTIGSNKDSINAESMNIQEIAENANNSLTSENKNALDKSGCHDIINVDEIKSEKFEIQGDGSDFNVNVEIEPVNESHENKTDIRCALCNSLFDDFNAYTNHYKTHNIIESAKCYMCPMQFAVIELLSEHLLSAHLQNISYCNVCFAMLSQDKLAEHMSIYHAKIVEVINAPNVKNEESTVLRLSDFCKKCKQPLNTSSEPHVCVEARSRCKECKHGCIHERYLASYRDQLRAKPEIFKCPDCDYQYKTKREIIQHANKVHLENKPHVCKQCNLGFLLKTSLARHNNLYHARCETCRRVFKDTDTMNKHKCSSGPRNNYKCELCGQGFTETKYEQHKQTALLAPDTCLICHQPIPIKCNMSRHLLDLHNLSLKKGLDRIVYECVICEVDFNDMADYSKHAWVHTGVHECHICAKRFSSRVLYDTHYKMHVTAQKLKCYICNEQQTDKHAYSQHLQTHGDYGKCTVCSKFVKHESINEHMKEHETTGNKFQCPHCSLVSSSASQSEVHVNRFHLQTRPYQCDVCKKRFYSKHLMRTHISKHYGKEKCTLCDRKFAKKWYLEMHMKVHENTTASNF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -