Basic Information

Insect: Adoxophyes honmai
Gene Symbol: ZIPIC
Assembly: GCA_005406045.1
Location: BHDV01012691.1:16651-24795[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.73 42 5.1 4.2 1 23 391 414 391 414 0.92

2 9 0.18 10 7.0 0.8 1 23 428 450 428 450 0.94

3 9 4.5e-05 0.0025 18.3 0.4 3 23 484 505 483 505 0.97

4 9 0.0022 0.12 13.0 4.5 2 23 509 531 508 531 0.96

5 9 2.5 1.4e+02 3.4 0.2 3 21 543 561 542 566 0.89

6 9 0.048 2.7 8.8 0.9 2 23 574 596 573 596 0.85

7 9 1.3e-05 0.00073 20.1 0.8 1 23 602 625 602 625 0.93

8 9 6.4e-05 0.0036 17.9 4.6 3 23 636 656 635 656 0.99

9 9 0.00026 0.015 15.9 0.3 1 23 662 685 662 685 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.73	42	5.1	4.2	1	23	391	414	391	414	0.92
2	9	0.18	10	7.0	0.8	1	23	428	450	428	450	0.94
3	9	4.5e-05	0.0025	18.3	0.4	3	23	484	505	483	505	0.97
4	9	0.0022	0.12	13.0	4.5	2	23	509	531	508	531	0.96
5	9	2.5	1.4e+02	3.4	0.2	3	21	543	561	542	566	0.89
6	9	0.048	2.7	8.8	0.9	2	23	574	596	573	596	0.85
7	9	1.3e-05	0.00073	20.1	0.8	1	23	602	625	602	625	0.93
8	9	6.4e-05	0.0036	17.9	4.6	3	23	636	656	635	656	0.99
9	9	0.00026	0.015	15.9	0.3	1	23	662	685	662	685	0.95

Sequence Information

Coding Sequence: ATGGAGACCTTTAAAAGGGAGCCGGGCACAGAAGTGTGCCGCGGCTGCCTCAGCGCGGACCGGCGACTGGCGCCGCTGGccaattttgatttgtttttctcTATTTTAAACGATCGAGAGAAGTGGGAGGCTCTAGATTCTTCAgctgtgtatgtatgttgggaATGTGCTGCGTTCCTCCGGAAGATGAATATCTTTCGCACACAGGTCCAAAGAGCTCACAAATTACTGGCAGAGACGGCTGAGGAATTGCCCATCAAAGGATTATCACAACTTTCCGTTACTCATAAACAAGATTTTGACGTCATACTTAAAGACAATCTTGAAGGCACTGATGAACCACTTATATTTTCAatgaaagaagaagaaaatgaAGTGACAATAGAAGAACACAATCTTGATTTAAATGATGATCATAACTTTGGAGATGATCATTTTGAAACTGTTGTTAGTATGGATTTGGATTTGAAAGTAGAAACAGAAAGTGAAATGGAAAAAATAATTGATGCACCGCAAATGAAACAAATGCTTAAGACGGAGAAAGAATCTAAGActaacattaaaagaaaaatgaaaGCAGACACAAAGGAAAGTAAACCTTTTAGAACAGGTATAAGATGTTCAAACAGAATCagtcttttaaataaaaagaatagtGTTATTGAAAAACTTGCCACTTTAATTAaaggtaaaatacaaaaaggtaAAACTAAAGGTATTACtaaaggtaaaataaaaaggaaatataaaaaaagaaaaaaatcaaaaagttCTACTAAAGCagtaaaaaagttacaaaaagaaACTATTAAGGAAGTGGAAGTTGAAGTTGATTTACaactagaaaaaataaaaggagAGGAAATGATAAAAgataaaatagaaatagataATATTGATGACACTTCAAGCGATGAAGAAGATGAAAGTAAAATGCTTGAAATTGATCCCGATTTTAAATTTcggtgtgataatgataaatacaaAGACACTGAAAGAGGAGTTCAGAAAAGAGGTTTAGCTGTTAAGAATCactgtttgtatgtaaaacgcCTCAGAATGGAAGAAATTATAGATGTTAATGaatatttcactaaagttgATCTAAGTAGTGAAGAGATTAAGGAAGTGTTAGATAATGAACTTTCATATAAAACGGAAACGTTTCCACATAGCTGTATTTATTGCGGTCGGTGTTTCCAATTGATAAGAACTTTAGTTAGGCACAAGCGAAATTGGCATAAACAGGAGAGTAGATGCCAGAATCCGGTGTATTCCATGTACCGTTGCAATGTATGTAGTAAAATAGTGAGAAGCGGACATGCGGAGGCTCATACGAAGTACTTACATCGCGTACAATATATCTGCATTGAATGTGACAAGGTGTTTTGGGATGAATCTGAGGGTGTAAGTCACTACAAAGAGGTCCACAAGTCTGGTGCCGTCGACTGCGCGGAGTGCGGGAAAACTGTACGGAGCAAGAACTCCTTGGCGAAGCATATAAAAATGAACCACACCGAAATGACATGCGACATGTGCGACAAAGTGTGCAAATCCTATCGAAATTTGCAATACCATAAGCAAAGGAAGCACAACACTGAAGAGTCGCCGCCGGAACTGCGGTACTGCGTCACGTGCGACAAACAGTATCCCacggtttttttgtatgacatgCATCTGCGATATACTCTGGTGCACAAAGGAGAAATTCAGAGAGTAACGTGCACTGATTGCGGCAAGGTTCTACGCGACAAGCTCAGCCTTAAGTTCCACTTCGAGCGATTCCACGCAGCCAAGACCAACTTCCCGTGCCCCCACTGCAATAAGTATTTCTCGCGGAAGTCAGGTGTCCAGACCCACATCGAGGGGGTCCACTTGAAGGTTCCAAAACTGAAGAATAAGCTGTGCAGCTTCTGCGGTCGGGGCTTCACCCACTCGCGTACATTAATCCACCACATTCGCACACACACGGGTGAGCGTCCGCACGCGTGCCCGCACTGCCCCGCCGCCTTCGCGCAGCCCTTTCCGCTGCGGAAGCATCTGGCCACGCAGCACCCTGAAGCCCTCGCGATACTATCTGAGGCCCCCACTACACAAGCGAGTGGCCCTTGA
Protein Sequence: METFKREPGTEVCRGCLSADRRLAPLANFDLFFSILNDREKWEALDSSAVYVCWECAAFLRKMNIFRTQVQRAHKLLAETAEELPIKGLSQLSVTHKQDFDVILKDNLEGTDEPLIFSMKEEENEVTIEEHNLDLNDDHNFGDDHFETVVSMDLDLKVETESEMEKIIDAPQMKQMLKTEKESKTNIKRKMKADTKESKPFRTGIRCSNRISLLNKKNSVIEKLATLIKGKIQKGKTKGITKGKIKRKYKKRKKSKSSTKAVKKLQKETIKEVEVEVDLQLEKIKGEEMIKDKIEIDNIDDTSSDEEDESKMLEIDPDFKFRCDNDKYKDTERGVQKRGLAVKNHCLYVKRLRMEEIIDVNEYFTKVDLSSEEIKEVLDNELSYKTETFPHSCIYCGRCFQLIRTLVRHKRNWHKQESRCQNPVYSMYRCNVCSKIVRSGHAEAHTKYLHRVQYICIECDKVFWDESEGVSHYKEVHKSGAVDCAECGKTVRSKNSLAKHIKMNHTEMTCDMCDKVCKSYRNLQYHKQRKHNTEESPPELRYCVTCDKQYPTVFLYDMHLRYTLVHKGEIQRVTCTDCGKVLRDKLSLKFHFERFHAAKTNFPCPHCNKYFSRKSGVQTHIEGVHLKVPKLKNKLCSFCGRGFTHSRTLIHHIRTHTGERPHACPHCPAAFAQPFPLRKHLATQHPEALAILSEAPTTQASGP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -