Basic Information

Insect: Adoxophyes honmai
Gene Symbol: -
Assembly: GCA_005406045.1
Location: BHDV01072319.1:160580-176452[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 4.1 2.3e+02 2.7 1.3 2 23 253 275 252 275 0.91

2 13 0.09 5.1 7.9 0.1 2 23 299 320 298 320 0.94

3 13 0.074 4.2 8.2 0.1 1 23 342 364 342 364 0.95

4 13 0.00027 0.015 15.9 0.8 2 23 399 421 398 421 0.95

5 13 6.4 3.7e+02 2.1 0.4 2 23 446 468 445 468 0.89

6 13 0.018 1 10.1 0.8 1 23 490 512 490 512 0.97

7 13 0.0052 0.3 11.8 0.3 3 23 518 539 517 539 0.95

8 13 0.37 21 6.0 1.8 1 21 544 564 544 565 0.94

9 13 0.97 55 4.7 0.2 1 10 572 581 572 595 0.86

10 13 0.011 0.61 10.8 1.2 1 19 602 620 602 625 0.83

11 13 0.00033 0.019 15.6 5.9 1 23 629 651 629 651 0.96

12 13 0.00013 0.0073 16.9 0.8 2 23 658 679 657 679 0.95

13 13 0.0059 0.33 11.7 2.3 3 23 687 707 686 708 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	4.1	2.3e+02	2.7	1.3	2	23	253	275	252	275	0.91
2	13	0.09	5.1	7.9	0.1	2	23	299	320	298	320	0.94
3	13	0.074	4.2	8.2	0.1	1	23	342	364	342	364	0.95
4	13	0.00027	0.015	15.9	0.8	2	23	399	421	398	421	0.95
5	13	6.4	3.7e+02	2.1	0.4	2	23	446	468	445	468	0.89
6	13	0.018	1	10.1	0.8	1	23	490	512	490	512	0.97
7	13	0.0052	0.3	11.8	0.3	3	23	518	539	517	539	0.95
8	13	0.37	21	6.0	1.8	1	21	544	564	544	565	0.94
9	13	0.97	55	4.7	0.2	1	10	572	581	572	595	0.86
10	13	0.011	0.61	10.8	1.2	1	19	602	620	602	625	0.83
11	13	0.00033	0.019	15.6	5.9	1	23	629	651	629	651	0.96
12	13	0.00013	0.0073	16.9	0.8	2	23	658	679	657	679	0.95
13	13	0.0059	0.33	11.7	2.3	3	23	687	707	686	708	0.94

Sequence Information

Coding Sequence: ATGGAGAGCAAAAGTTCCGATTGGATGCGGGGGCCAAGCGGGCCGACCGTTTGCCGTTGTTGTTTCGCCGAAGGATGTTACAAGGACATTTCCACTGAATACTTCTGGATGGGCAAGAGGGAAGTTTACGCCGAAATGTTAAGCGAAACATTGGACTTGAATATTGCCTACGCGCAGACTTCGGGCCCAAACAGCAACAGCAGGCTAATCTGCGAGCCGTGCATCTCCCGTCTCCGAGACGCGTCCGAGTTCAAGCGCCAAGTGCAAGAGTGCGAGAAGATGTTCCTGCAATACCTGGATCCTGGGAGGGACGTCGCTGAACTGGAGGCTATCCCAGAAACGCTGGCGTTGGAGAAGGACGTGAAACTGGAACACGTGAAGCAGGAGAAGGGGCAGAGCGACGACGACTTCGACGACCGCGCCGGCTTCGACGACGACGATGACGACGACCTCGACGACCAACCCCTAACAAGGCTGGCCTCCAAAGTGCCTAAAAAGGAGTCGGTCGACCTTCTGGACCTCCTGGACAACGCCAAGGTGGCCGCGAAACGCAAGTCCACCGCCAAAGCCAAGGCGACCCCCGCCAAAAAGGCCAAAACGAAGAAGGACTCGCCCAAAGCGACAGCGAGCAAAACAAAACctgagaagaagaagaaaggtATAGAATCAAAGAACACGGAGACTGCCAAGAAAAATGCATCTATCGTACTGAGCCATTCTTCCGCCTATCCGTTCCAGATAACGTCTAACATACTCCGTTGTTGTTTCTGTCTTGACGTTTACGAAAAACCCGAGGAGTTTAGGCAACATATGGATTCTCAGCATCCAAACATTGACAAATCTGAACTGCCTTCAATCGAATCTAGCCTAGTTCGAGTCGATATCACTGACTTGCACTGCAACATTTGCTCAGCTGAAGTCTCAAGGCTAGACGATTTAGCGATGCATTTAGCTGAACACGGCCTCGATATAGATGCAACTGAACCCATCGGCCTGGTTCCTTTCAAACTTGACGCCAATAGTTTCGCATGCGTTGTTTGTGACAAGGTCCTGCCAGGATTCTTCCAACTGGCCAGACATACCGTTAAACACTACTACATCCTTGGATGGAGTCGGGATGCCGCCAAGCAGAACGCCCAAATAATACTGAAAAACTCGACGGCGTATCCGTTCCTGCAAACTTCTGACTTGTTGCGGTGCTGTTTTTGCCCGGAGGTTTTCAACGACCCCTCGCTGTTTAGAACTCATATGGATGTCATGCACATTGGTGTCGACCGGTCCACGTGTAATAAAGCTAACCTGGACACTCAGACACGCGTTGACGTCACACACCTGCGATGCTTAAAGTGCATCAAAAGGTTCGCCTCAATTGAGGCCATTGCAAAACATTTGCATGACGAGCATGACCTCCAAATCCAGTTGACCCAGAGCTTAGGTCTTGTGCCATTAAAACTTGAAAAAGATCGTTTTGAATGCGTTGTTTGTTCCCAAAAATTCACGAGCACCATGCAGGTGTCCAGGCACACTGGCACGCACTATTTTAGGAATATTTGCGATATTTGCGGGAAACGATTTGAGAGCAGAAGAGGAATAGATAGTCATGTCAAAATGCGACATTCGTCACGGTCTTTCCACTGTAGAAAGTGTAAGGGATCCTTCTCAACGCTGGAAGCTAAGAAGGAACATTTGCGTCAGAATAAATCTTGCCTGCCGTTTAGATGCAACATTTGCAAGGAACGCTTTTTGTTTTGGGAACGAAGAGAGGATCATTTGGTTGAGGTTCATGGCAAAGAAAAGAAACTGTTTCGCTGCACGGAATGTGAGAAAGTGTTTGAACGACGCACATTGCTCTACTTTCATTTTAAGGCTGCTCACACAGAGGACCACAAGTGTACATACTGTGATTTAACGTTTTCCACCAGGCGGGATTTACGCGAACACACACACTTACACACTGGAGAGCGACCTCTCAAGTGTAACGTCTGCTATAAAACATTTACCCGTGACAAGGCTCTGAGGCAACATCTAGTCATTCATGACGACAGCAAAAAGAAAATATGCACTGTCTGTAGCCGGCTGTTTACAGATCGTAAAAAATTACGCGTCCACGTTGAAAAGCATCACCCCGAAGTATTTGAACAAGAATTCCCGCTACATcacaaatga
Protein Sequence: MESKSSDWMRGPSGPTVCRCCFAEGCYKDISTEYFWMGKREVYAEMLSETLDLNIAYAQTSGPNSNSRLICEPCISRLRDASEFKRQVQECEKMFLQYLDPGRDVAELEAIPETLALEKDVKLEHVKQEKGQSDDDFDDRAGFDDDDDDDLDDQPLTRLASKVPKKESVDLLDLLDNAKVAAKRKSTAKAKATPAKKAKTKKDSPKATASKTKPEKKKKGIESKNTETAKKNASIVLSHSSAYPFQITSNILRCCFCLDVYEKPEEFRQHMDSQHPNIDKSELPSIESSLVRVDITDLHCNICSAEVSRLDDLAMHLAEHGLDIDATEPIGLVPFKLDANSFACVVCDKVLPGFFQLARHTVKHYYILGWSRDAAKQNAQIILKNSTAYPFLQTSDLLRCCFCPEVFNDPSLFRTHMDVMHIGVDRSTCNKANLDTQTRVDVTHLRCLKCIKRFASIEAIAKHLHDEHDLQIQLTQSLGLVPLKLEKDRFECVVCSQKFTSTMQVSRHTGTHYFRNICDICGKRFESRRGIDSHVKMRHSSRSFHCRKCKGSFSTLEAKKEHLRQNKSCLPFRCNICKERFLFWERREDHLVEVHGKEKKLFRCTECEKVFERRTLLYFHFKAAHTEDHKCTYCDLTFSTRRDLREHTHLHTGERPLKCNVCYKTFTRDKALRQHLVIHDDSKKKICTVCSRLFTDRKKLRVHVEKHHPEVFEQEFPLHHK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -