Basic Information

Insect: Adoxophyes honmai
Gene Symbol: -
Assembly: GCA_005406045.1
Location: BHDV01013944.1:379339-390681[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0021 0.12 13.1 2.9 1 23 382 404 382 404 0.96

2 12 0.0083 0.47 11.2 0.8 1 23 411 433 411 433 0.96

3 12 2.3 1.3e+02 3.5 3.7 1 23 437 459 437 459 0.95

4 12 6.9e-05 0.0039 17.7 2.9 1 23 464 487 464 487 0.98

5 12 1.5 87 4.1 0.0 3 11 494 502 493 515 0.81

6 12 0.11 6.4 7.6 0.0 2 19 526 543 525 546 0.94

7 12 0.42 24 5.8 0.2 1 23 555 578 555 578 0.86

8 12 9.9e-05 0.0057 17.2 3.8 1 23 584 607 584 608 0.94

9 12 0.0014 0.082 13.6 3.0 2 23 634 655 633 655 0.96

10 12 0.0007 0.04 14.6 4.2 1 23 661 683 661 683 0.99

11 12 1.6e-06 9.1e-05 22.9 1.0 1 23 689 712 689 712 0.98

12 12 4.1 2.3e+02 2.7 0.1 2 9 718 725 717 739 0.74

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0021	0.12	13.1	2.9	1	23	382	404	382	404	0.96
2	12	0.0083	0.47	11.2	0.8	1	23	411	433	411	433	0.96
3	12	2.3	1.3e+02	3.5	3.7	1	23	437	459	437	459	0.95
4	12	6.9e-05	0.0039	17.7	2.9	1	23	464	487	464	487	0.98
5	12	1.5	87	4.1	0.0	3	11	494	502	493	515	0.81
6	12	0.11	6.4	7.6	0.0	2	19	526	543	525	546	0.94
7	12	0.42	24	5.8	0.2	1	23	555	578	555	578	0.86
8	12	9.9e-05	0.0057	17.2	3.8	1	23	584	607	584	608	0.94
9	12	0.0014	0.082	13.6	3.0	2	23	634	655	633	655	0.96
10	12	0.0007	0.04	14.6	4.2	1	23	661	683	661	683	0.99
11	12	1.6e-06	9.1e-05	22.9	1.0	1	23	689	712	689	712	0.98
12	12	4.1	2.3e+02	2.7	0.1	2	9	718	725	717	739	0.74

Sequence Information

Coding Sequence: ATGACTTCTTGTGCTGTGCCTGGATGTGATTCTGATACCAGTGTGACCACGGATTGTACATTTCACCGCCTGCCGAGCTCTCTAGCCCCTCGCTCACGCTGGCTGTTGGCCCTCGGGCCGCTGCCCAGTGGCTCCTACGTCTGCAGCCGCCATTTTGAAGCCAGCATGTTTACACTCCAGGGTGACAGGAGAGTGCTGCTGCCTCACGCTGTGCCCAAGCTCTTCGGTGCTAATGAGACACCTGACTCAAGCGGACACTTAGCTCAGTCCGCACCAAGCTCTGTAATGGCTTGCCGTGTATGTCTGGCCACGAACGGGCGCCTGATTCCCATAAGCGGCAGCGGATTCGAAGAATCGCTCATAGCGTTCTCCGGTGTACCActgTCATTGGAACAGAGTCTGCCGCGTTATCTTTGCGTGTTCTGCATTGCGAAGCTGTCAAAGTGCGTCGCCTTCCGTGACAGCTGTCAACGGAGCGCCGCGTTGCTGCAGGGCCTGTTAAACAAAGGACCGTTAAACCTacaagacataaaaacagtCGACCGCAACTCACACCAACTTGCCAGCAACATCGCTCGCAACAAAGTCTTCCATTTTGGCACAGGAGCCCTCGCCACAGTAGAAATAAAAACCGAAGACGAATACAAAACTAATTTCGTCGAAATCGAATATATGGACGATGAGTTCATAAAAACGGATGATGTCAACGATTTGGTTGTGCACAGTTTGGATATACCCATAGAAGAGGCCGAGAGTGTCAAAATGATAAACGAAAGGCATAGAAAAGTTAAAGTCAAAGCTGAAATCATTTCTGAAATGGACTGTAAATCAGATGCAGAAGACTGTGTCGATTTCGACTCAGATTCATCACAAGAGGTACTCGTTCCGAAGAAGACGAATCGCAAAAGGGTGAAGCTAAAGAAAGCAGTGAAGAAGAGTCCGAAGAAGAAGAAAGATGCGAAAAAGAAAGAACCTCAAATCATAGACCCTGAGACTTCTAAGCCTATTAAAACTAGAAACAGAGTACGGAATCCTGATACGGATTCGGCGTTTGATAAAAAGTATAACTGCAAGACTATGATATTAAGCAAAGAAGAGCAAAAGAGAGAGATAGAAGATAGAAAGAAGAATAGCAAGTCGGCATACACTTGTGACGTTTGTGGCAAGGGGTACAAGACGGAGTGTACTCTCCTGACGCATAAAACGTACCACGACCCGAAAACTCTTCCATTCGAGTGCGATGTGTGCCTCCTTCGGTTCCGCTCCCGGCGCAGCATGCTGAAGCATCAGGACGGCCATCGCGCCACCTTCACCTGCAACGAGTGTGGTAACCTCAGCCGACATAGAACGCACGCCAAGGACCATTCCCTCATGCACAAGGGTACGACGTACACGTGCCCCTACTGCCAGCGGGCGTACAACCACCAGACCTCGTACTACAACCACATCCGGGTGCAGCACCCGGGGCAGAACGAGGCCTGCGACGAGTGCGGGGAGACCTTTGCCGCGGGCCGGGGGATCATGCTGCACAAGGCGCGGGCGCATAAACAGTACGGCAAACCGAACGTAATCTCAAAGTGCACGGTGTGCTCGGTCACATTCCTGACCGCGGACGCGCTGAGGCGTCACGCAGAGCTCGCGGCGAGCGCGCCGCATGCGGCTTTCCCGTGCACCGCATGCGGCGAGAGCTTTGATAGCGACGCGACGCGTGCGCAGCATAACAGGGAGCGGCATTCGCCCGCCGCACGACACTACTGCAAAGAGTGCGACAAGTCGTTCTCGAACGCGTCGTCGTTCGCTCTCCACGTGGATCGTAAGCATCACGACCGACGCATGCTGAGCGACCCCAGTCGCCCGCGGCCGGTGCGACAAGGCATCGCGCCGAGTGACTACCCTTGTGTGTGTGACATCTGTGGCAAGCGGTATTCGTGCAATGCGACGCTGCAGTACCACATGAACGTGCACCTGGGCCTGAAGCCGTTCCAGTGCGCGCACTGCCCCAAGGCCTTCCCGCACCAGGGACAACACAGGATGCATATGCGGGTACACACGGGCGAGCGGCCCTACCAGTGCAAGCAATGCCCGATGGCGTTCTCCCGCCGGAACAACTTCGCCAAGCACGTGCGGACCGTGCACCTCCGCGAGCAAGTGAAGTGCGACAAGTGCGGCAAGCAGATGAGCATCGCGAGCATAACCGCGCATGTGCGCGCCGTGCACATGAACATGCCGTACGTGCGCAAGCGGGACCGCAGCAAGAAGAAGCTGCTGCTGGTCGCAGAGTCCTGA
Protein Sequence: MTSCAVPGCDSDTSVTTDCTFHRLPSSLAPRSRWLLALGPLPSGSYVCSRHFEASMFTLQGDRRVLLPHAVPKLFGANETPDSSGHLAQSAPSSVMACRVCLATNGRLIPISGSGFEESLIAFSGVPLSLEQSLPRYLCVFCIAKLSKCVAFRDSCQRSAALLQGLLNKGPLNLQDIKTVDRNSHQLASNIARNKVFHFGTGALATVEIKTEDEYKTNFVEIEYMDDEFIKTDDVNDLVVHSLDIPIEEAESVKMINERHRKVKVKAEIISEMDCKSDAEDCVDFDSDSSQEVLVPKKTNRKRVKLKKAVKKSPKKKKDAKKKEPQIIDPETSKPIKTRNRVRNPDTDSAFDKKYNCKTMILSKEEQKREIEDRKKNSKSAYTCDVCGKGYKTECTLLTHKTYHDPKTLPFECDVCLLRFRSRRSMLKHQDGHRATFTCNECGNLSRHRTHAKDHSLMHKGTTYTCPYCQRAYNHQTSYYNHIRVQHPGQNEACDECGETFAAGRGIMLHKARAHKQYGKPNVISKCTVCSVTFLTADALRRHAELAASAPHAAFPCTACGESFDSDATRAQHNRERHSPAARHYCKECDKSFSNASSFALHVDRKHHDRRMLSDPSRPRPVRQGIAPSDYPCVCDICGKRYSCNATLQYHMNVHLGLKPFQCAHCPKAFPHQGQHRMHMRVHTGERPYQCKQCPMAFSRRNNFAKHVRTVHLREQVKCDKCGKQMSIASITAHVRAVHMNMPYVRKRDRSKKKLLLVAES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -