Basic Information

Gene Symbol
ZNF423
Assembly
GCA_005406045.1
Location
BHDV01069810.1:69808-81768[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 0.34 19 6.1 0.1 2 23 115 136 114 136 0.95
2 18 0.071 4 8.3 0.1 2 23 140 162 139 162 0.93
3 18 1.2 68 4.4 0.9 3 23 398 419 396 419 0.95
4 18 0.0077 0.44 11.3 0.0 1 20 427 446 427 448 0.95
5 18 0.043 2.4 9.0 0.4 3 23 459 479 458 479 0.96
6 18 4.2 2.4e+02 2.7 0.5 1 23 495 518 495 518 0.86
7 18 0.0037 0.21 12.3 5.6 1 23 527 550 527 550 0.95
8 18 0.71 40 5.1 0.2 3 23 627 648 627 648 0.85
9 18 4.4 2.5e+02 2.6 2.3 1 23 653 676 653 676 0.92
10 18 4.1e-05 0.0023 18.5 1.8 1 23 682 704 682 704 0.97
11 18 1.7e-05 0.00096 19.7 1.5 1 23 711 733 711 733 0.98
12 18 9.7e-05 0.0055 17.3 2.3 1 23 738 760 738 760 0.96
13 18 0.00031 0.018 15.7 0.2 1 23 766 788 766 788 0.98
14 18 1.7e-06 9.5e-05 22.8 1.2 1 23 794 816 794 816 0.98
15 18 0.00035 0.02 15.5 2.6 2 23 823 844 823 844 0.98
16 18 0.00092 0.052 14.2 0.6 2 23 853 875 852 875 0.97
17 18 0.0085 0.49 11.2 0.1 2 23 881 902 880 902 0.94
18 18 0.099 5.7 7.8 3.9 1 23 908 931 908 931 0.97

Sequence Information

Coding Sequence
ATGACTTCTGAAGAATCTGATGACGAACCGCTAGCGGTTATAGCAGCAGCAAAGAAATCGAACTCGGGAAAATATGCTGATGAAATTGAAATTCTCACCAAAGAAGATGTTCAGAGGAAGCAGAAACTTGTTCCCCAGAAGAAAATGTCGGCTATGACCATTAAAATAAACCGCGCTTTAAAGGCTGTGATCAACCCGCCGGTGGTGGAGCGGCCCATGGACGTATGGCTTTATTTAAAAGACTTAAACCCAACTGGGCCCTACAGTTGTTTACTTTGCTCCAATTGGTTTATAAACAGGGGTAAAATGATCGTTCACTACGTGTTAAATCATAAGAAAGACTACTGTGGGATCTGCCGATATTTCGTACCCGATAGAGACTCCTGGTTTGCCCACCTTAAATTCCATACACCATGGCCATGTTCTCAATGTATAAAGAACTTTGAAACAGAGGCTGAGCTTCGACAGCACCTCAGCTTGGAACACAACTTGGTGCACTGCCGACTGTGCCACTTCAGAGTCCCAGATGATGATCAGTACAACACCCATTTGATACAAAAACACAGTGTCTCCAACTTAACCAGCAAAGACAAAGAGTTATGGGAGTTTGAATATGAAGGCAGCGATAAATTTCTCTGTTTACTCTGCTCTAAGTCAAATAATCTATGTAACATGTTCTTCAACCACTACATGGGGTACCATCACTTCACTCTCAAGTGTCTGAGCTCTTTGCTCTCCGGGAGAGACCTTCCATTCACAGTCAGTGGTGCTGACATCAGTCCTGCATTTGTCGAAGGGGAATTAAAAGATCATTGTAGAATTGGCTATGTTGATTTGGAGAGTAAAGCCCCAGAAACAACAAATGAAGAACATAGTGATAATGAAACACAAGATCTGTTAAATGTACTGATACCAGAAATCAAACAGGAAGCTACTAGTGAACCTGAGGATGCACCAACTGATGATAAAGTAACAGACAAAAAGAAGAAAGTAAGGGATGAGAATGACATTGCTAATGTATACAAGGGTGATGAAGATTTTGATGTTACATTGACTGAGTTGATAATATTAGAGAAATGTTACTTTGAATATGTGAATCAGACGTTAAATGACATTAACTCAAACTTGATTCCAGTGTCCGGTATAGATTATTCTGCATTGAAACTTGATCAACCGATAAAAGATATATTTTGTTCACTCTGTAagaacaattataataatattcaatTGTTTATGTCTCACATGATAAAGAATCATTTTATGAAGATGGCACCAATCTATTCATGCCGTGTGTGTGCAACAACTTTTGAAAATCAATCTGAGTTGGACACTCATATTGCAGAAGAATTGGGGGACTTTGATGATCTGTGGTTATGTCAATTTTGTGACAGAGAATTTGATAGCAGAGAAGCTACAAGGCGGCATTTGGCTGAGCACTGGGATGTCATAGGCTCGGACAATTGTTACAGTCCACATTTAGGATTCAAGTGTAAGTTTTGCCCAACACTGTTCTGGAATGAGACAGACAGAGAAGCGCATCAGGTGCGCTTACATTACAACCAGTACATGGACCAATTCTACAAATGCCATGATTGTACAGAAACCTTTAGTGATAAGATATTCTTCATCCACCATTACATGGAGAAACACAACTCCCCTCACTCTCCGTCTTACTTACTGAAATGCAGTGTCTGCTGCATAGTGCAAGCCAGTGTAGAGGATATGAGGACCCACTTCAAGGCTAAGCATCCTGAGGCCAGGAAGGTGTTCTGTTCCATGGACTCATGCCAGTACCGTCCATTGAGCCATCGGAAGTCTTTCAAGTTCCATGTGAGGACGGTCCACGACCCGCTCTCGCGGCCCGCTAGGCCGGCGGGCTGCAGCGTGTGCGGGCGCGAGTTCGTGAGCGCGCGCGCGTGCGGAGCGCACATGGCCCAAGTCCACGGCCCGGGCAAGTTCAAGTGCAAGCTGTGCCGGGAGGTGCTGCACACTTTGGACGAGAGGAAGCTCCACTACCTACTCCGGCACCCGGGCCGCCACCCGTTCGAGTGCAGCGAGTGCGGCAAGTCCTTCCAGTACAAATCGTCGCTCTACATGCACAAGCAAGAGCACTCTCCTAACAAACAGAGCTATACTTGCTCGTACTGCTCTAAAGTGTTCGCGAAACGGGATTCCTTCCGCGAGCACCTCCAAATCCACGAAGGGCCCCGGCACGCGTGCTCCTACTGCCCCATGCGCTTCGTGCAGCGCTCCAACATGCTGCGGCACGAGCGGCGCCACACCGGCGAGCGGCCCTACGCCTGCCCGCACTGCGCCAGGACCTTCGCTGACAAGGGCGCCGCCACCTCGCACGCCAgAACACATTCTAAAGAAGCGTCCTATGCTTGCGTTTACTGCGGGCAGACGTTCGTTCAGAAATCTAAACTGACGTATCATATTAGAAAACACACTGGGGAGAATCTGGAAACCTGTACTATCTGCTCGAAGCTCTTCACCAGCGCTTGCTCCCTGCGCGAGCACATGAAGATACATCTGGCGAAGAAGAAAGAGGCTGTGCAATGCCCGCTATGTGACAGGAAGTATCAAGACGAGCGATACATGTTGCGCCACTTGAGAACTTCACATACTCGCACGCAGCTGCCCTGTCCGCTGTGCGACAAGGCGCTCACTAGCATGGCGGGCTTGCGGCACCACGTCGTGTCTCACAGCGGACTAAACACCTTTCGGtgtAAATGCTGCCCTAAGTCCTACGCTGTCAAGCGGTCCGTCGTGAAACACTTAAGAAAGCGACATGGACTGAAAGGCAACGAATTAAACATTAAAGACTATTTTAAACGAATAGATCCTCGCGACTGCAATCTCGGCCTCGACGAAGAAGCCATGACGAGGATATTCGGACCCCCGAAGAAAACTATGAACGATGTTCTCATTGGTGACTTCGTGACTCTCACCAAAACCTTCGACAAACCAACGAAAGAAGGCACTGAGGACGAAAATGATGATGACGAAAATGACGATGACGAAAATGACAATGACGAAAAAGACAATGACGAACATTCCGATGATGGCAATGAGAATAGTGAGAAGGTCGAAGATATTAGTGAGGTTATTATCAAAACGGAGAAGAGGGATGATGAATTAGAGCCCACCGATTTTGTTAGTGTTAAGATTGAACCGATGGAAGATGATGCTGAAGATAGAGGATCttgttattattatgaaatgtga
Protein Sequence
MTSEESDDEPLAVIAAAKKSNSGKYADEIEILTKEDVQRKQKLVPQKKMSAMTIKINRALKAVINPPVVERPMDVWLYLKDLNPTGPYSCLLCSNWFINRGKMIVHYVLNHKKDYCGICRYFVPDRDSWFAHLKFHTPWPCSQCIKNFETEAELRQHLSLEHNLVHCRLCHFRVPDDDQYNTHLIQKHSVSNLTSKDKELWEFEYEGSDKFLCLLCSKSNNLCNMFFNHYMGYHHFTLKCLSSLLSGRDLPFTVSGADISPAFVEGELKDHCRIGYVDLESKAPETTNEEHSDNETQDLLNVLIPEIKQEATSEPEDAPTDDKVTDKKKKVRDENDIANVYKGDEDFDVTLTELIILEKCYFEYVNQTLNDINSNLIPVSGIDYSALKLDQPIKDIFCSLCKNNYNNIQLFMSHMIKNHFMKMAPIYSCRVCATTFENQSELDTHIAEELGDFDDLWLCQFCDREFDSREATRRHLAEHWDVIGSDNCYSPHLGFKCKFCPTLFWNETDREAHQVRLHYNQYMDQFYKCHDCTETFSDKIFFIHHYMEKHNSPHSPSYLLKCSVCCIVQASVEDMRTHFKAKHPEARKVFCSMDSCQYRPLSHRKSFKFHVRTVHDPLSRPARPAGCSVCGREFVSARACGAHMAQVHGPGKFKCKLCREVLHTLDERKLHYLLRHPGRHPFECSECGKSFQYKSSLYMHKQEHSPNKQSYTCSYCSKVFAKRDSFREHLQIHEGPRHACSYCPMRFVQRSNMLRHERRHTGERPYACPHCARTFADKGAATSHARTHSKEASYACVYCGQTFVQKSKLTYHIRKHTGENLETCTICSKLFTSACSLREHMKIHLAKKKEAVQCPLCDRKYQDERYMLRHLRTSHTRTQLPCPLCDKALTSMAGLRHHVVSHSGLNTFRCKCCPKSYAVKRSVVKHLRKRHGLKGNELNIKDYFKRIDPRDCNLGLDEEAMTRIFGPPKKTMNDVLIGDFVTLTKTFDKPTKEGTEDENDDDENDDDENDNDEKDNDEHSDDGNENSEKVEDISEVIIKTEKRDDELEPTDFVSVKIEPMEDDAEDRGSCYYYEM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00411840;
90% Identity
-
80% Identity
-