Ahon019593.1
Basic Information
- Insect
- Adoxophyes honmai
- Gene Symbol
- -
- Assembly
- GCA_005406045.1
- Location
- BHDV01012256.1:54936-67639[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.11 6.4 7.6 2.9 1 23 260 283 260 283 0.98 2 11 0.00055 0.031 14.9 0.5 2 23 291 312 291 312 0.95 3 11 0.6 34 5.3 0.8 1 20 316 335 316 338 0.85 4 11 2.7e-05 0.0016 19.0 2.6 1 23 343 366 343 366 0.97 5 11 0.002 0.11 13.1 0.1 2 23 375 397 375 397 0.94 6 11 0.29 16 6.4 0.0 3 23 436 457 435 457 0.92 7 11 3.9e-05 0.0022 18.5 0.7 1 23 462 485 462 485 0.95 8 11 3.9e-05 0.0022 18.5 0.1 3 23 514 534 513 534 0.98 9 11 6e-05 0.0034 17.9 0.3 1 23 540 562 540 562 0.96 10 11 0.034 2 9.3 1.8 2 23 569 590 568 590 0.95 11 11 1.1e-05 0.00064 20.2 0.2 1 23 596 619 596 619 0.96
Sequence Information
- Coding Sequence
- ATGGCTACAGTGAAGCAAGAGACCGACGAGCTGCTAGCTTGTCGAATATGCCTCGCGACCAACACAAAACTTTTTGGTCTCTATGAACATCATTTGAACGACACTTTCGTCAATGTTATGGGCACAACGCTATCAGCATGGGATGGGTTCCCACAGCATGTGTGTAGTTGGTGCCGGGCCGAGCTGCTCCGCGCCGCAGGGCTCCGTGCGCGCTGCCGACGCTCCGAAGAGCTGCTCAAACAAGCACTCATACACCAACACTTTATAACAACAAGCTACCTCGAAACACTTGACCGAGTGGCACACCAGCTCACTCTCTGCCTCACGATCTCCAATTCCTCCACCGACTCCACTCAAGAAGACACCAAAGCAGAGAAAGAAGAGAAAACAGAAGAGTTTGACCCCGAACCAGACGTGGACGATTTCGATCTCTACCACCCCGAATTTGATGAACCAAtcataaatatcaaaaataaaatgttactgGAGAACATGAAGAATACAGAGTTGAGAGTGGATTTGGTGAAGACGGATCTGGAGGTGGAGAAGAGTGCGAAAAAAGTGAGGAAAGTGAAGAAAGGTGTGAAGAAGAAAGAGAGGGAGGGAAAGGAGAAGGAGAAACGGAAGATGAAGGGATTCAAAAAGTTCTTTGCTAGCGAAGAGGATTATACCAAATTTGAGAATACTTataacatagAGATAGTGAAGCTGACCGAAGAGGAGCAGCACCGCGAGATGCAAGCGCGCAAGGAGTCGAGCAACTACCTGCGCTCGGCCTACAAGTGCGAGCGGTGCTTCAAGGGGTTCCTCTCCGAGACCACGTACGAGAACCACCAGAAAAAGACACATGAACCGAGCAACGGTCGCAACGAGTGTGGACTGTGCGGCGCGCGCTTCAGACACCCCGCGGGGCTCCGGAAACACTTCGAGTCGCACACGCTCAAGTTCATTTGCAAGATCTGCCAGTTTGTCACCAGGCACCGGAGTATGGCGGTGATGCATGCAGATTTCCACTCCGGCAAGACCTTCGTATGCAAGTATTGCGGTCTCACTTTCAAtaaGCAGACTACGTTCAATACGCACACGCGCGTGCAGCATCCACTGGAGAACGCGCGCGCCGGCACCTGCTCCGCCTGCGGGGAGACATTCACGGGGAAAAGGGGCTTGCAGCAACACCGCGCTATTGCACACAAGAAGcTTTCCACTCCGGAGCTGAAATGCCGCGTGTGTCTGGTGCAGTTTGACAGCGTGGAGGCCAAACAGAGACACAAGGAGAACAACATCTGCGACCCCAAGCTCAGAGCGTGCGCGGCTTGCGGCGACCGTTTCCCCGACGAAGAGTCCCTCGACAGGCATCAGAAAGAAGCCCACGTTCGGGAACACTTCAAATGCGACCAGTGCGACACGACGTTCGCCAAGAAGTCTTCTCTGGCTGTCCATTTCGAGCGTGTGCACCTCAAGATCAAGCCGAAAAAGCCTGCGTTCTACAAGTACCATCAGTACGGCAAGGGGCGCCTCAAGCTACGCAACGCGGAGATATGCGAGATCTGCGGGAAAGGCTACCCGGACACGACGTGGCTGCGCTACCACCAGCGCACGCACACAGGCGAGCGGCCGTACAAGTGCTCGCAGTGCACCAAGAGCTACATGACGCCTGCCGGCCTACAGCGCCACGTGGTGATCCACTCGGGCGTCCGGCGCTGGCAGTGCTCGCAGTGCCCCAAGACCTTCCTGCACCAGTCCTCCATCTACACACATAAGCTggtCCACACGGGTGAAAAGCCATTCGTGTGCCAGATATGCAGCAAGGCATTTACCCAGTCGGGGTCACTCGCAACACACGTGAAGTACGTCCACATGAAGCTCAAGCCTCCCCCGCGACGAAGACGACAAGAGTGGAAGCCGCAGCCATAG
- Protein Sequence
- MATVKQETDELLACRICLATNTKLFGLYEHHLNDTFVNVMGTTLSAWDGFPQHVCSWCRAELLRAAGLRARCRRSEELLKQALIHQHFITTSYLETLDRVAHQLTLCLTISNSSTDSTQEDTKAEKEEKTEEFDPEPDVDDFDLYHPEFDEPIINIKNKMLLENMKNTELRVDLVKTDLEVEKSAKKVRKVKKGVKKKEREGKEKEKRKMKGFKKFFASEEDYTKFENTYNIEIVKLTEEEQHREMQARKESSNYLRSAYKCERCFKGFLSETTYENHQKKTHEPSNGRNECGLCGARFRHPAGLRKHFESHTLKFICKICQFVTRHRSMAVMHADFHSGKTFVCKYCGLTFNKQTTFNTHTRVQHPLENARAGTCSACGETFTGKRGLQQHRAIAHKKLSTPELKCRVCLVQFDSVEAKQRHKENNICDPKLRACAACGDRFPDEESLDRHQKEAHVREHFKCDQCDTTFAKKSSLAVHFERVHLKIKPKKPAFYKYHQYGKGRLKLRNAEICEICGKGYPDTTWLRYHQRTHTGERPYKCSQCTKSYMTPAGLQRHVVIHSGVRRWQCSQCPKTFLHQSSIYTHKLVHTGEKPFVCQICSKAFTQSGSLATHVKYVHMKLKPPPRRRRQEWKPQP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00462687;
- 90% Identity
- -
- 80% Identity
- -