Ahon013510.1
Basic Information
- Insect
- Adoxophyes honmai
- Gene Symbol
- PRDM7
- Assembly
- GCA_005406045.1
- Location
- BHDV01058295.1:53515-65371[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.0001 0.0057 17.2 0.5 2 19 328 345 327 348 0.94 2 10 0.022 1.3 9.8 0.1 5 23 403 421 402 421 0.95 3 10 1.9e-05 0.0011 19.5 4.4 1 23 427 449 427 449 0.99 4 10 4.3e-05 0.0024 18.4 1.6 1 23 455 477 455 477 0.99 5 10 2.5e-05 0.0014 19.1 1.8 1 23 483 505 483 505 0.99 6 10 4.6e-06 0.00026 21.4 0.9 1 23 511 533 511 533 0.99 7 10 5.4e-05 0.0031 18.1 1.4 1 23 539 561 539 561 0.99 8 10 0.00044 0.025 15.2 0.3 1 23 567 589 567 589 0.99 9 10 1.7e-05 0.00096 19.7 1.8 1 23 595 617 595 617 0.99 10 10 1.2 69 4.4 0.1 1 22 623 644 623 646 0.70
Sequence Information
- Coding Sequence
- ATGAGTCGTGTACTTCGAAAGCGGCCACGAGTCTCCTACTATGAACCAGAGGAACCGCCTTTTGACGAATTCATGTttTGTTCCGAATGTGGGGACTACGTCTATGAATACTGCTCTATACATGGACGTCTACTAATCATTCCAGATGAAAAGGTACCGACTAAGACCGGGTACCCAGACTTTGTACCGCGAGCGGCACTCACGATACCCCATGTTTTCCTACACCTCGCTTACTCCTACATAAAAGATGCTGGGATTGGCGTGTTCAGCTCACTCACTCTGCCAGTGGGAGTCCGGTTCGGGCCGTACAAGGGAGTACGGGCTGCCAGACCCGTCGATAGTTCCTACGCTTGGCAGATCTATGACAAAAACCATAAGCCATCGCACGTCGTTGACGCAAGCGATGACAACGCGTCCAACTGGATGCGGTATGTGAATTGCTCGCGGCACATCTCTGAACAGAACCTGGTGGCGTACCAGTACCAAGGCCAGCTGTATTACAGgaCAATAAAAGTGGTACCACGCTACACCGAGCTGCTGGTGTTTTATGGCAGCGAATTCGCAGCGAAGCTCGGGGTGCCACTGAGCCTTTATTCCGCGCCCTGCGAATGCGATGAATGCCAAGCGGAATTACCTAAAAGAAGAAAagtgaagaaaaataaatttcaagcGCCTATAGAAAATAAACCGATGGaagaaaaaaatcttcaaaataaACCCACTGAAAAATTACAAGCAACTGCCATACTCCTTCAAAACGATTTGAagaaaaatatagataaaacGATTCCTGCTAGCGCCATTTCTGCAGATAAGTCTAAAAAAGGGACTAAGAAAAAGGGTGGTACAAAAAAACACACTCTAAAAGTTCAAGAACCACCACTTGATATATCAGCAGCGTCAATTGGTGCAAATAGATTTGTTGCAGATGCTGATGTACCAATCAACGAATTAAACTCGACAGCAGCCAATCTTACCTCTAAATGTAATACATGTGACGtaacttttaataataaatcagATTTAGAGAAACACTCTCAGGCGTGTGCTTTGGTAAACAACAATAACAGCACAACATGTGACGACAAAAGTAGTTGCGAAAGTCAAGAAAAGAAGTATGAAAAGCAGAAGCTTTTTACTtcgataaaaagtaatttgacaTCACGTGGAAAAAATGACGCGGTCGAAAAACCATTTAAGTATAAAAACTGCAGCGCTTCCTTTGCGCGGGAAGAGGATTTGACAAGTCACCAGATAAGTCACACAGCTGACaagccttacaaatgcactcattgtAGCTACTCGAGTActataaaaagtaatttgacaAATCATATAAGAACAcatactggagaaaagccatataaatgtgctGAATGTAGTTACGCCAGTATCTATAAAAGTCATTTGACAGATCATATAAGAACGcatactggagaaaagccatataaatgtgctGAATGTAGTTACGCCAGTACCGTTAAAAGTCATTTGACAAGTCACATAAGAACGcatactggagaaaagccatataaatgtgctGAATGTAGCTTCTCCAGTGCCCAAAAAAGTGATTTGACAAAACATATAAGAACGcatactggagaaaagccatataaatgtgctGAATGTAGCTTCTCCAGTGCCCACAAAGTTGCTTTGACAAGACATATAAGAACGcatactggagaaaagccatataaatgtgctGAATGTAGCTTCGCCAGTGTCCAAAAAATTACTTTGACAATACATATAAGAACGCATACTGGAGttaagccatataaatgtgctGAATGTAGCTACGCCAGTGTCCATCAAAATAATTTGACAAAACATATAAGAACGcatactggagaaaagccatacACATGCGATATTTGCGACTACAGGACTGCTTGGGCGAATATTTTGAAAActcatttgttaaaaatacacGGTGGATCTATCAGACCTGTCTCCTAA
- Protein Sequence
- MSRVLRKRPRVSYYEPEEPPFDEFMFCSECGDYVYEYCSIHGRLLIIPDEKVPTKTGYPDFVPRAALTIPHVFLHLAYSYIKDAGIGVFSSLTLPVGVRFGPYKGVRAARPVDSSYAWQIYDKNHKPSHVVDASDDNASNWMRYVNCSRHISEQNLVAYQYQGQLYYRTIKVVPRYTELLVFYGSEFAAKLGVPLSLYSAPCECDECQAELPKRRKVKKNKFQAPIENKPMEEKNLQNKPTEKLQATAILLQNDLKKNIDKTIPASAISADKSKKGTKKKGGTKKHTLKVQEPPLDISAASIGANRFVADADVPINELNSTAANLTSKCNTCDVTFNNKSDLEKHSQACALVNNNNSTTCDDKSSCESQEKKYEKQKLFTSIKSNLTSRGKNDAVEKPFKYKNCSASFAREEDLTSHQISHTADKPYKCTHCSYSSTIKSNLTNHIRTHTGEKPYKCAECSYASIYKSHLTDHIRTHTGEKPYKCAECSYASTVKSHLTSHIRTHTGEKPYKCAECSFSSAQKSDLTKHIRTHTGEKPYKCAECSFSSAHKVALTRHIRTHTGEKPYKCAECSFASVQKITLTIHIRTHTGVKPYKCAECSYASVHQNNLTKHIRTHTGEKPYTCDICDYRTAWANILKTHLLKIHGGSIRPVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -