Ahon002121.1
Basic Information
- Insect
- Adoxophyes honmai
- Gene Symbol
- -
- Assembly
- GCA_005406045.1
- Location
- BHDV01021776.1:201554-210002[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 1.7 94 4.0 0.0 2 23 280 302 279 302 0.92 2 15 0.0038 0.22 12.3 2.0 2 23 325 347 324 348 0.93 3 15 0.0048 0.27 12.0 1.8 1 23 353 376 353 376 0.86 4 15 0.039 2.2 9.1 1.6 1 23 381 404 381 404 0.86 5 15 0.00014 0.008 16.8 6.5 3 23 411 432 410 432 0.97 6 15 4.6e-06 0.00026 21.4 0.8 1 23 439 462 439 462 0.97 7 15 0.00031 0.017 15.7 0.7 3 23 470 490 469 490 0.97 8 15 0.037 2.1 9.2 0.3 1 23 551 574 551 574 0.96 9 15 0.0096 0.54 11.0 0.0 2 23 605 627 604 627 0.94 10 15 0.018 1 10.1 2.7 2 23 650 671 650 672 0.95 11 15 0.0022 0.13 13.0 3.3 1 23 677 700 677 700 0.96 12 15 0.13 7.1 7.5 0.3 1 23 703 726 703 726 0.93 13 15 0.0048 0.27 12.0 0.3 2 23 732 754 731 754 0.91 14 15 0.00035 0.02 15.5 0.6 2 23 762 784 761 784 0.97 15 15 2.4 1.4e+02 3.4 0.2 2 13 791 802 790 809 0.79
Sequence Information
- Coding Sequence
- ATGTACGACGGTATTATATGTGCACTTTTCAATGCAGCTGAGTGTTGTTATACTgaaaaagtaaatgtaaattgtAAACGTAAACATGTCACTGGGTGGAATAAACATGTGCGCGCCGCCCACGAGCAGGCTCGACTTTGTTTTGCGAACTGGGTGCTACAGGGTAAACCGGACTCTGGCCGCGTTTACGGGGAGATGTGTGAGACCAGGCGTTTATTTAAAGCGAAATTAAAATGGTGCCAGAATAATCAACATCAAATAAAAATGGACATCATAGCTGAACAACACTCTAAGAAAAACTTCGGTCAGTTTTGGAAAACATCGAATAGATTAAATCCTAGGGCGAGCCTCCCCGTGAGCGTGGCGGGAGTGTGCGATCCCGTGGGCATTGCGAATGTCTTCCGCTCGCATTTTAATGTTAGGGCTCCGTTAGGGCTGGCGGCGCGGCCGGTGCTTGATGCTGAGACTGTCGGTAAGGAGCGTAGTGTGAGATTTACAGCAAAGGAAGTAAGTGCAACCATAAAGGGAATGGTCCGGGATAACGCTCCTAAGGCAAGGTGGCACACGACCGATGTCCGCAATCGCCTCAAACTGAGCTTGATCCGAAAGAACGTTCGCGTCGTCCTACAATACGGCAACGTGATGCCGTTCATGTGGTCGCGCTTCCACACATACCTCTGCTTCTATTGCAAAGCGGTGGCCATGGAAGTAGATGCCTTGCGAGAGCATGTTGCCGAAACCCACCACCAATCCGCAGAACTCGACACTATACTCAACGAACGCATTGCGTCCCTCTACGAAAGCGATGTACCAGTCAAAGTTGACGTTAAAAACATCTCCTGCAAACGTTGCGTCACTACTGTGGCTGACTTGCCTGAGCTGATAGAGCATCTTAATGACGTCCACCAAGCCGGTTACGACACATCCGTAAAATACTGCCTCTTAGCCTTTGAGCTGGACAGGGAAACCCTCGAATGTTCTAATAATTGCGGCTTGACATTCAACAATTTTAAATCCCTTCTCCGCCACGCTTTAAAACACCACGTTGAACAGAATTTCACTTGCACGGAATGCGGGAAGTCTTTTCATTCCAGAAACGCCGTGGTTTTACATTTCAATGATTATCACAAAGAAGGGGGGTACCCATGTGAGACTTGCGGGATGGTGTTCCAATCGGCTTCAAGGCGATACCATCACAAGAAAAGTGTGCATCTAATTGACCAAAGGGCGTGTAATGAGTGTGGAAAAGTCTGTAAAAGCAAACATTACTTACACAGACATCTGAAAACTGTGCACGGTGTCGAAGGCTACAGCTATGATTGTGTTATTTGTGGAAAGCAGTTCGACCAGAAAAGCAATATGACCACACACGTCAGGAAAATGCACATCATGGAAAAGAACGAGGCTTGCACGATTTGCGATAGCAAATTTTACGGCAAATCGCAGCTGAAGAGGCATATTGTAAAGCATGCGATAGAGAGTGTAATGGAATGCAAAGTCGCTAAAAAAGTACACAGTTCAAAAATCAGTACATTGGAGGATAAAAATAAGAAACTGGAAATCAAACGTAAGCAATTGATAAAGCGGCGCAATGTCGAATACGTCCTGCAGTACGGCAACGTCACCCCCTTCCTCTGGTTCAAGGGGAAGTACAGGTGCTTCTACTGCACCGAGCCCATGAAAAATCCCGAGATGTTGCGCGAACACACCGCCAAGGTGCACCAGTTCGCTAACCTCGAGCTAGCCGTGTTCGACAGGACAAAAGACAACAGGAACAAAGATGCTGccatcaaaatcgatgtcacaGGCATCTCTTGCAAACTGTGCCCCAAACCCGTCCCAGATTTAGAACAGCTGATCACGCACCTCATCATAGCACACGACGCGGAATACGACGTCAACGTCTCCAACTGCCTCTTACCCTTCCAGTTGGACAAGGACAACCCGACCTGCCCCACCTGCAAAATGAAGTTCGTCTTCTTCGAATACCTACTTCGCCACGCCAACAAACATCACTTGGCTCATGAGTACATTTGCGATGTGTGTGGCACTAGTTTCCAAGGGGAGAATCACTTGAAGATGCACCATAGGTACTACCACAGGGAGTACAAGTGCGATTACTGTGATGTCCGACTGGCGACGCTGTCCAAAAAGATTATCCACGAAAAGAACGTCCACATGGCTAATCTCCTCAAGTGCCCCAACTGCCCGGAGACTTTCAAGAGTCCTTACTTCAAAAAGCTACATCTAGCCAATGTGCATGGAGTCGAAGAACTCAAAATCAAGTGCCAGTACTGCACTAAGGTGTTCCCTCAGGAGAGTATCATGTCTCGGCACATGCGGAGGGTCCATTTGAGAGAAAGGAACGTGGAGTGCGAAGTTTGTGGGGAAAAATTCTTTGGTCCTTATGACAGTATGCACCATGGCTACGTCACTATCGCGAAGACGCAAGAAGACATCAGCGAACTAGAAGTTGTTCAGATGGAATTCATAAACGACGAAGTTGCTGGGCAGTATATCGTCCAGGAAACGATTCAGAActtgtaa
- Protein Sequence
- MYDGIICALFNAAECCYTEKVNVNCKRKHVTGWNKHVRAAHEQARLCFANWVLQGKPDSGRVYGEMCETRRLFKAKLKWCQNNQHQIKMDIIAEQHSKKNFGQFWKTSNRLNPRASLPVSVAGVCDPVGIANVFRSHFNVRAPLGLAARPVLDAETVGKERSVRFTAKEVSATIKGMVRDNAPKARWHTTDVRNRLKLSLIRKNVRVVLQYGNVMPFMWSRFHTYLCFYCKAVAMEVDALREHVAETHHQSAELDTILNERIASLYESDVPVKVDVKNISCKRCVTTVADLPELIEHLNDVHQAGYDTSVKYCLLAFELDRETLECSNNCGLTFNNFKSLLRHALKHHVEQNFTCTECGKSFHSRNAVVLHFNDYHKEGGYPCETCGMVFQSASRRYHHKKSVHLIDQRACNECGKVCKSKHYLHRHLKTVHGVEGYSYDCVICGKQFDQKSNMTTHVRKMHIMEKNEACTICDSKFYGKSQLKRHIVKHAIESVMECKVAKKVHSSKISTLEDKNKKLEIKRKQLIKRRNVEYVLQYGNVTPFLWFKGKYRCFYCTEPMKNPEMLREHTAKVHQFANLELAVFDRTKDNRNKDAAIKIDVTGISCKLCPKPVPDLEQLITHLIIAHDAEYDVNVSNCLLPFQLDKDNPTCPTCKMKFVFFEYLLRHANKHHLAHEYICDVCGTSFQGENHLKMHHRYYHREYKCDYCDVRLATLSKKIIHEKNVHMANLLKCPNCPETFKSPYFKKLHLANVHGVEELKIKCQYCTKVFPQESIMSRHMRRVHLRERNVECEVCGEKFFGPYDSMHHGYVTIAKTQEDISELEVVQMEFINDEVAGQYIVQETIQNL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -