Basic Information

Insect: Adoxophyes honmai
Gene Symbol: -
Assembly: GCA_005406045.1
Location: BHDV01028809.1:118958-124269[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.0018 0.1 13.3 3.7 1 23 99 121 99 121 0.98

2 9 0.0038 0.22 12.3 1.1 6 23 133 150 133 151 0.94

3 9 1e-05 0.00057 20.4 2.5 2 23 160 181 159 181 0.97

4 9 1.3e-05 0.00071 20.1 0.5 3 23 189 209 188 209 0.98

5 9 0.00025 0.014 16.0 3.8 1 23 217 240 217 240 0.95

6 9 4.8e-07 2.7e-05 24.5 1.8 1 23 245 267 245 267 0.95

7 9 7.5e-05 0.0043 17.6 0.3 1 23 274 296 274 296 0.99

8 9 0.00012 0.0067 17.0 1.2 1 23 302 324 302 324 0.98

9 9 4.2e-06 0.00024 21.6 1.0 1 23 330 352 330 352 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.0018	0.1	13.3	3.7	1	23	99	121	99	121	0.98
2	9	0.0038	0.22	12.3	1.1	6	23	133	150	133	151	0.94
3	9	1e-05	0.00057	20.4	2.5	2	23	160	181	159	181	0.97
4	9	1.3e-05	0.00071	20.1	0.5	3	23	189	209	188	209	0.98
5	9	0.00025	0.014	16.0	3.8	1	23	217	240	217	240	0.95
6	9	4.8e-07	2.7e-05	24.5	1.8	1	23	245	267	245	267	0.95
7	9	7.5e-05	0.0043	17.6	0.3	1	23	274	296	274	296	0.99
8	9	0.00012	0.0067	17.0	1.2	1	23	302	324	302	324	0.98
9	9	4.2e-06	0.00024	21.6	1.0	1	23	330	352	330	352	0.99

Sequence Information

Coding Sequence: ATGCCGACATCACTGTGCATTTGTTGCTATAACCTTCTGCAACAGTTCTCAAACTTCAAGAGGACCTGTATTGAGTCAGAAAACAAACTGCTTCACCTTTCCAAAAGTTTGAAATTGGAAGCAGAGTCTGCAGTAGTAGTGAAAGAAGAGGAAGATGATCATTTTGATACAACAGATGCTGATTTTTTTGGTGACACTCAAATCCAAGAGAAACAAGAAACTGCcctaaaacGGGATGCTATGAGTACCCAAGAAAGTCCAAAACCTCACACCAAACCACACACCAAATTCAAGTACACCTGTGAGCTGTGCAACAAACAATTTGTGCTCAAAAAGTGTTTTGAAGCGCACAAGCTAACACATGAGGGAAACATAGCAACGACACATTGTATACCGTGCGACAAAACATATTCTACACGGAGCGGCCTCCAGCAGCACAACGAAATGCACCACTTCTCTCGCAGCTTCAAAGACGTGACCTGCAAAGTGTGCTCTAGAGTGTGCAAGACACCGTACACATTGAAGGCCCACTATAGGACCCATGAGGAGCGCGAAGCCCGAATATGTAACGAATGTGGGAGGCAGTTTAAGAGCGATGTAACAttaaatAACCACATGGAAACTCACACAAAGAACCGCCAGCGCAGTTTCGCCTGCCAGCATTGCGGGAAAACATACGTCAACAAGAAAAATCGCGCCAAACACCTGTACCGGAGACACACGGACAGACGCTTCTTGTGCCACTACTGCAACTACGGTTTCACTGACAAAGCCAACCTAACTAAACACATAATGATCCACGAAGGGACTCAACGGCTATACAAATGTGATATTTGTTTTCGAGCCCTAGCTTCTTCAGCGTCATTAAGTGATCATAGAAGGACTCATACCGGTGAAAGGCCGTTCTCATGCAGCTTTTGCCCGAAGAGATTTGCAAAGAAGGGTGTAATGATGGATCACCAACGGACACACACAGGAGAGAAGCCCTTTAAATGTGTTGTGTGTGAACAGAATTTTGCCCAGCGAAGTTCTATGAGGAGACATATGAAAGTGCATGACAGACTTAAGTGA
Protein Sequence: MPTSLCICCYNLLQQFSNFKRTCIESENKLLHLSKSLKLEAESAVVVKEEEDDHFDTTDADFFGDTQIQEKQETALKRDAMSTQESPKPHTKPHTKFKYTCELCNKQFVLKKCFEAHKLTHEGNIATTHCIPCDKTYSTRSGLQQHNEMHHFSRSFKDVTCKVCSRVCKTPYTLKAHYRTHEEREARICNECGRQFKSDVTLNNHMETHTKNRQRSFACQHCGKTYVNKKNRAKHLYRRHTDRRFLCHYCNYGFTDKANLTKHIMIHEGTQRLYKCDICFRALASSASLSDHRRTHTGERPFSCSFCPKRFAKKGVMMDHQRTHTGEKPFKCVVCEQNFAQRSSMRRHMKVHDRLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -