Ahon016014.1
Basic Information
- Insect
- Adoxophyes honmai
- Gene Symbol
- L
- Assembly
- GCA_005406045.1
- Location
- BHDV01011121.1:182027-252234[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 1.6e-06 8.9e-05 22.9 1.7 1 23 79 101 79 101 0.99 2 17 0.57 33 5.4 8.5 1 23 107 129 107 129 0.97 3 17 1.1e-06 6.3e-05 23.4 4.0 1 23 135 157 135 157 0.99 4 17 2.8e-05 0.0016 19.0 0.1 1 23 163 185 163 185 0.98 5 17 0.00033 0.019 15.6 0.1 2 23 201 223 200 223 0.95 6 17 4.5 2.6e+02 2.6 0.1 9 23 254 269 250 269 0.93 7 17 0.32 18 6.2 0.0 3 23 322 342 321 342 0.97 8 17 0.015 0.85 10.4 0.0 2 23 356 377 355 377 0.91 9 17 4.9e-05 0.0028 18.2 0.6 1 23 385 408 385 408 0.94 10 17 0.034 2 9.3 0.1 1 23 413 436 413 436 0.92 11 17 0.071 4 8.3 0.1 1 23 492 516 492 517 0.89 12 17 0.00021 0.012 16.2 0.1 2 23 568 589 567 589 0.96 13 17 0.17 9.9 7.0 0.0 1 23 597 619 597 619 0.97 14 17 2 1.1e+02 3.7 0.7 2 23 627 648 626 649 0.93 15 17 0.93 53 4.8 0.3 1 23 723 745 723 745 0.94 16 17 0.0037 0.21 12.3 0.1 1 20 753 772 753 775 0.95 17 17 0.27 15 6.5 0.5 1 23 782 804 782 804 0.93
Sequence Information
- Coding Sequence
- ATGGAGGCAACCGATCGATGGGATTCTGAAATCGCGGAAGTCGCGGACATCAAATCGGAGAGCGCTGACAGTTTGGGGTCAGAAGCGTTGGGCAGCGTCGGCAGCACGGCGGGCAGCTCGTGGCCGTCGTCGACGCCGGAGCCGTCGCCGTCGCCGACGTCGGCCGACGCGGGCGCCGAGCCCGACGCCGACGCCGAGCCGCCCTTCACCCTTGGTGCTACCGAACACACGCCCTACCAGTGCCAGTTCTGCGACAAGGCCTTCCCGCGACTGTCGTACCTGAAGAAGCATGAGCAGACGCATTCGGATCAGATGCCCTTCCGCTGCGAGTTCTGCTCGCGCCACTTCAAGCACAAGCGCTCACGGGATCGCCATGTCAAGTTGCACACTGGCGACCGCAAGTACCGCTGTCCGCACTGCGAGTCCGCCTTTTCCAGGAGCGATCACTTGAAGATCCACATGAAGACGCACGACATCCAGAAGCCGTTCCAATGCACGGTGTGCAACCGTGGGTACAACACGGCCGCAGCGCTAACTTCACACATGCAGGGCCACAAGCGGGACCGCGACGGCCGCGAGCCCGACCGCCGGCGCGCGCTGCGCTGCCCCCGCTGCGGGGACGCCTTCCGGAGGACTGATCTGCTGCAGGCTCACATGACTAGCGCCCACGGAGTGGACGCAGCGGCCCTGACGCCGCCACGGCGCGTCGCGTCGCAACCGCCGCCCGCGCTCCTAGCCTGCATTTACTGTACCCGAGACACTTTTACCACCATGGAACAGCTACAGCTCCATGTACGGGCAGCGCATTCCGCCTTACTCAACGGGGAGACACCGACAGATCAGAATGTGGACCAGCCCGCTCCTACGGACCTAAGCAGAAGAGCACCTGAGGAGCCTCCGATCAAGCGCCGTCGTTCGGATTCCGCGACTCCTCAACTAGCTTTATCACCTGGAACGCTACTGTGCAACCAATGTGATGCCGCTCTGCCGGATTTTGAAGCGTTCCGTGCTCACTTGAAAGGGCATTTGGAAGAGGGTGGGGAGTTGGGGCGCGGGAGCCCGACGCCTTGCCCGCACTGTGGGGCGTCGTTCGCGGACGCCGCCGCCTCGGAGCGCCACCTGGCTGCTCACTACCTGGCCGTCTCCTGCGAGTACACTTGCCACAGCTGCGCGCGCAGCTTCCCCACTCCGGACGATCTGCAGAAGCATCTTTTGGATTTGCACGCGCATCACCTTTATCGATGCTCCTTGTGCAAGGAGATCTTCGACTCGAAAGTAGCGATTCAGGTGCACTTCGCCGTGGCGCACAGCGGCGAAAGCAAAGTATGGGTCTGCCGCTcttgcggcggcggcgcgctgcgcTCCGAAGCGGAGGGCGCGGCGCACGTGCGTGCGAGACATGCGGCGGCGCGATGCGCATGCGGAGCCGTGCTGGGAGGGCCGAGGGGAACCCGGGCGCATGCGCACCATGCGTACCGCTGCCCCGCGCCCGCATGCGCCGACACCTTCGCCGTGCAGTACCTGCTGGAGCGGCACATGCAGGCGCACCATGCGGTGCAACACCAGGCCTTAAACGGCGAAAGCGCCCGCCCAAAGCGAGTCGAAAACAACAACTCCGATAACGCCGACGACAACTGCTCGCCCTGCGCCGGCGGCGAGGCGGCCGACGAGCGACGCCGCAAAAACGGAGCTGTCGCGCTCCAATGCGCGTATTGTGGAGAACGTACTCGGAGCCGCGCCGAGCTCGAGGCGCACACGCGCGCGCActccggcgccgccgccgcgcgacaCAAGTGCCTCATCTGCGACGAGATCCTGCCCTCCGCGGCCGTGCTGGCCGAGCACAAGCTGACGCACTGCAAGGTGGTCGCTGGCGACACGTGCGCCCGGTGCCGCGCTCGCCTCCCGTCCGAGGAATCCTTCCTGAGCCACATGGCGCGGCACCACCCTGCGCTGCCCGCGCCCTGCGTCGTCTGCCGCCAGACGCTCGCCTCCGAGGCCGAGGCACGTTTACACGCGCGCTTCCACCTCCGGTCTTCTGGCGACGAGCAAAGGTGCGCGATTTGCCTACGCGCGTTACCCGAAGGCGAGGCCGGCGAGGGCGCAAGAGCTTGTTCCTCATGCTACGCGCGACACGCGGCCCCTCGCGCTCCTCCGCCCGCAGACCATGACTGCCGACTCTGCCGCCGCGCCCTAGGCTCCCCAACTCGTCTCCAAGCGCATCTCATCGAACACACCTTCGCCGGCATCGGAGCCTTCACCTGCTACTTGTGTTCAGCAGTCTTCACTAGCGCCGCCGGCCTCCAGCGCCATTTGCCTGAACACGCGTCAGCTCCCCGGCCCTACGACTGCGGCCGCTGCGGCGTCAAGTTCTTCTTCCGCGCTGAACTCGACAACCACTCCTTCGTGCACCTCGAGGAGGCTGAGATAGCCCAGAGGGCGTTCTACGAGGCTTATGCGAGGGGAGCGGCGTCGGCTTGGGCCGCTTTGGCGCCTCCAGAGCCGCCACCGGCCGCCACGCCTACACCGGCGGCCGACGCGCCCGTCAAACAAGAACCAGAGATAAAGGAGGAGAAGACCGATGAGTACATAGAGGTGGGCTccccgccccccgcgccccCTGCGCCCTCACCCGTCGTCAAACAAGAAAAACCCGACGAAGACTGA
- Protein Sequence
- MEATDRWDSEIAEVADIKSESADSLGSEALGSVGSTAGSSWPSSTPEPSPSPTSADAGAEPDADAEPPFTLGATEHTPYQCQFCDKAFPRLSYLKKHEQTHSDQMPFRCEFCSRHFKHKRSRDRHVKLHTGDRKYRCPHCESAFSRSDHLKIHMKTHDIQKPFQCTVCNRGYNTAAALTSHMQGHKRDRDGREPDRRRALRCPRCGDAFRRTDLLQAHMTSAHGVDAAALTPPRRVASQPPPALLACIYCTRDTFTTMEQLQLHVRAAHSALLNGETPTDQNVDQPAPTDLSRRAPEEPPIKRRRSDSATPQLALSPGTLLCNQCDAALPDFEAFRAHLKGHLEEGGELGRGSPTPCPHCGASFADAAASERHLAAHYLAVSCEYTCHSCARSFPTPDDLQKHLLDLHAHHLYRCSLCKEIFDSKVAIQVHFAVAHSGESKVWVCRSCGGGALRSEAEGAAHVRARHAAARCACGAVLGGPRGTRAHAHHAYRCPAPACADTFAVQYLLERHMQAHHAVQHQALNGESARPKRVENNNSDNADDNCSPCAGGEAADERRRKNGAVALQCAYCGERTRSRAELEAHTRAHSGAAAARHKCLICDEILPSAAVLAEHKLTHCKVVAGDTCARCRARLPSEESFLSHMARHHPALPAPCVVCRQTLASEAEARLHARFHLRSSGDEQRCAICLRALPEGEAGEGARACSSCYARHAAPRAPPPADHDCRLCRRALGSPTRLQAHLIEHTFAGIGAFTCYLCSAVFTSAAGLQRHLPEHASAPRPYDCGRCGVKFFFRAELDNHSFVHLEEAEIAQRAFYEAYARGAASAWAALAPPEPPPAATPTPAADAPVKQEPEIKEEKTDEYIEVGSPPPAPPAPSPVVKQEKPDED
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01437318;
- 90% Identity
- iTF_00411731;
- 80% Identity
- -