Ahon008460.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Adoxophyes honmai
Gene Symbol
-
Assembly
GCA_005406045.1
Location
BHDV01070132.1:101337-109368[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 15 0.0018 0.1 13.3 3.2 1 23 315 337 315 337 0.98
2 15 1.9e-05 0.0011 19.5 0.8 1 21 357 377 357 378 0.95
3 15 0.00067 0.038 14.6 1.2 1 23 403 425 403 425 0.98
4 15 0.25 14 6.6 1.1 1 21 430 450 430 451 0.91
5 15 0.11 6.4 7.6 0.9 1 20 505 524 505 526 0.92
6 15 0.0034 0.19 12.4 1.0 3 23 531 551 529 551 0.93
7 15 9.1e-06 0.00052 20.5 1.6 1 23 557 580 557 580 0.98
8 15 0.0074 0.42 11.3 2.1 2 23 600 621 599 621 0.96
9 15 7e-07 4e-05 24.0 4.1 1 23 627 649 627 649 0.99
10 15 1.4e-06 8.1e-05 23.1 4.1 1 23 655 677 655 677 0.99
11 15 0.00028 0.016 15.8 2.0 1 23 683 705 683 705 0.98
12 15 6.2e-07 3.6e-05 24.2 3.0 1 23 711 733 711 733 0.98
13 15 4.1e-07 2.3e-05 24.8 5.2 1 23 739 761 739 761 0.99
14 15 0.0025 0.14 12.9 2.6 1 23 768 790 768 790 0.96
15 15 0.00015 0.0085 16.7 0.1 1 23 795 817 795 817 0.98

Sequence Information

Coding Sequence
ATGTCTACCCAATGTGTGAAGGAAGAGGTGGCGTGGGAGGAAGAATGTGTGAACGCGCTCTGGGAAGCCTTGTTCGCCGGGGAAGAGGTCAAACCCGACTTGGAACCCAGGATTGACACCATACAGGAACAGGACTTTGCTATACCAGTTGCCAACGATGCACAGATCAAGACAGAATCAGCACAAGCCCCAAAGGATGCTCAATGTCCTCCCATTGGTCTTGGAGACCCTCGTACTGAAGCGCCGCAAGATTCCGTGAACGCCTGTAATCTCCAAAACAcgaacaaaacaataaaaactgaACCTTTAGAAGATTTTCAAAGTGGTATTCAATCCAGTCTTATAGATGCTATTATTGGCGATATAGCCAACACAGACTTAGCTCTCAATGCTATAGACGATACCAACATCTCTAAAGATCTTTGTGATTCAAATGTTAAACAAAATCTTAGTGAAAAACTCGCTCAGGAAGCTAGAGATTTCGAAAATGTAGAAGATACGTCTAATGCAGAAGATAACACTggtaatatagtaaaaaaagaaGTAAGTCAGCTTGAAGATGTTCCTAATAACCCAACCAATTCCAATGATCTCAATGGTGCTCAAAAGTCTAAAACACAAGATTCTAAAGTTGTCAATGATATTGAATCAAACCGTAAGCTTGATAGCAATTCTAATAACGTAGATTCTGTTTCTTACGAAGTATCAAAAGATAGTGCTCCAGATTTGGGTATTTATTCTCAAATGAGTTTCAATGGCGATTCTGGTGTTAGTGATGTCTCTGATACGGAATTTgataaagttttaaataaagaatctAGTGCGGATAGATCTGAAGTTAGGACGCAAACTGAACAGGTTCCTAGTCTTATAGAATCTAGTTGTGTAACGTTAATAAAACCATGCTCAGTGAAGCTTGAACGCAAATTTCTAAAAAGCGGCTTTATGTGCCAGATATGCCCCAAAATTTGTGGCTATAGACACAATCTTATGGCCCATTACTTAAAACACACGCAAGCCGAAATCGCAACAGTTAAAATCGAAAAGAAAATTATCAGGACGGGTAATTTTGAATGCCACATTTGTGGCAAATTTTTATCTCGCAATAATCAATTGGCTCGTCACTTGAAGAGTAAAAGTTGTGATCCTTTGATCAAACAAATGCGAAACAAAGCTACCAATGATACTGAGCTCAAAAAAACTTATTTCTCTTGCGATCTCTGTGGCATGTCGACTTTAAGAAAAACATCTTTGATCAAGCATATGAAAAGACATCTAAGAGCGGTGTTTAAATGCCATACTTGCTATCGCCAGTTCACTGCGGACCCTGAATTGTATGACCATTTGAAATCAGGTGattgccaaaaaaaacaaaataaatataccgaTAAAAGTAAAGGGATACCCCTCAAATCTTGTTATGTTAGGCTTGAACGCTACAAGGGAAATGTAGATAATGTTATAATAGAAGCACCGAACAAAACTGAAGAGGATTCAAACAAAGATGATGTCTACTATTGTGGACTCTGTGAAAAACAGTTTGAAACGTTACATGCTCTTGGTGATCATGTATGTAACCCAAAAAAGCATTGTCTCATTTGTAAAAAGATATTTGAGAATGCTGGTGACTTAGAaaaacattcattcattcatgcCACTGAGAAAGTTTTCTCTTGCAATGATTGCCCAAAAAAATGTCGTTTCAAGCCCAATTTGATAGCACATATCAGAAGAATCCATGGTTTTAATACTCTGCTGGGGATTCACCTGCCCAAACTCACAAGAAAAAAGAAATCTAAGTGTAAAGTGTGCAGCAAAACGTTTAACAGTCgccaaattttaaaaagtcactATAGCGTCCATGCGAACGACTACCCTTTCACGTGCGAAACTTGCAAGAAGAGTTTCAAAAGGGCACACACATTGACTGTACATATCCGCACACACACTAAAAACAAACCTTACGTATGTAACTTTTGCTCGAAAAGGTTCACTCAACAGGGGCATTTAACTTCACACATAAAGACacatacaaaagaaaaaccGTACAGTTGCAGCATTTGTGACAAGCGTTTCGCGGAATTACACCAAATGAGACTTCATACCAAAGTTCACTCTTTAGAGAGACCATACCACTGTGAAGTTTGTCCGAAATCTTTCAAAGATTCCAGTACGTTGAAGATTCATAAAAGGACACATACTGGTGAAACTCCTTATGAGTGTAAGATATGTAAAAAACGGTGCTCACAGTCGTCCAATTTGAGAACGCATATGAGGagccacgaaaaaaaaacatggccgTTCTCATGCCATGTTTGTGAAAAGAGGTTTCAAAGGAGATTGTATTTAGATAGGCATTTGGCACTGCATGATTCGCGGACGTATATGTGTGAAGTGTGTGGAGCTAAATTTGACAACGCGAGTGTTCTGAGCTCTCACGCCCGTACGCATTATTCTGGTGAATAA
Protein Sequence
MSTQCVKEEVAWEEECVNALWEALFAGEEVKPDLEPRIDTIQEQDFAIPVANDAQIKTESAQAPKDAQCPPIGLGDPRTEAPQDSVNACNLQNTNKTIKTEPLEDFQSGIQSSLIDAIIGDIANTDLALNAIDDTNISKDLCDSNVKQNLSEKLAQEARDFENVEDTSNAEDNTGNIVKKEVSQLEDVPNNPTNSNDLNGAQKSKTQDSKVVNDIESNRKLDSNSNNVDSVSYEVSKDSAPDLGIYSQMSFNGDSGVSDVSDTEFDKVLNKESSADRSEVRTQTEQVPSLIESSCVTLIKPCSVKLERKFLKSGFMCQICPKICGYRHNLMAHYLKHTQAEIATVKIEKKIIRTGNFECHICGKFLSRNNQLARHLKSKSCDPLIKQMRNKATNDTELKKTYFSCDLCGMSTLRKTSLIKHMKRHLRAVFKCHTCYRQFTADPELYDHLKSGDCQKKQNKYTDKSKGIPLKSCYVRLERYKGNVDNVIIEAPNKTEEDSNKDDVYYCGLCEKQFETLHALGDHVCNPKKHCLICKKIFENAGDLEKHSFIHATEKVFSCNDCPKKCRFKPNLIAHIRRIHGFNTLLGIHLPKLTRKKKSKCKVCSKTFNSRQILKSHYSVHANDYPFTCETCKKSFKRAHTLTVHIRTHTKNKPYVCNFCSKRFTQQGHLTSHIKTHTKEKPYSCSICDKRFAELHQMRLHTKVHSLERPYHCEVCPKSFKDSSTLKIHKRTHTGETPYECKICKKRCSQSSNLRTHMRSHEKKTWPFSCHVCEKRFQRRLYLDRHLALHDSRTYMCEVCGAKFDNASVLSSHARTHYSGE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-