Ahon008199.1
Basic Information
- Insect
- Adoxophyes honmai
- Gene Symbol
- -
- Assembly
- GCA_005406045.1
- Location
- BHDV01043719.1:44531-52585[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 7.6e-06 0.00043 20.8 4.2 1 23 6 29 6 29 0.95 2 18 0.00067 0.038 14.6 0.3 2 23 35 57 34 57 0.95 3 18 8.4e-05 0.0048 17.5 0.2 2 23 66 88 66 88 0.96 4 18 9.4e-06 0.00053 20.5 1.5 2 23 97 119 96 119 0.95 5 18 1.1e-06 6.4e-05 23.4 0.8 2 23 127 149 127 149 0.97 6 18 1.3e-05 0.00071 20.1 0.7 2 23 157 179 156 179 0.95 7 18 5e-06 0.00028 21.3 1.7 1 23 185 208 185 208 0.98 8 18 0.00076 0.043 14.5 0.6 1 23 239 262 239 262 0.94 9 18 0.00028 0.016 15.8 0.8 1 23 291 314 291 314 0.98 10 18 0.33 19 6.2 3.6 2 21 322 341 321 342 0.93 11 18 0.0028 0.16 12.7 1.6 2 23 351 373 351 373 0.96 12 18 0.0029 0.17 12.6 5.5 1 23 398 421 398 421 0.97 13 18 0.00014 0.0079 16.8 0.5 3 23 429 450 428 450 0.96 14 18 0.00021 0.012 16.2 4.6 2 23 457 479 456 479 0.94 15 18 0.051 2.9 8.7 2.0 1 23 485 508 485 508 0.96 16 18 0.19 11 6.9 7.1 2 23 516 538 516 538 0.95 17 18 3.2e-05 0.0018 18.8 0.2 1 23 545 568 545 568 0.98 18 18 0.023 1.3 9.8 2.2 5 23 615 634 612 634 0.89
Sequence Information
- Coding Sequence
- ATGGCGTCTCCAGAATATGAGTGCGACTACTGCACTCGCTCCTTCACAAGGAAATACAACCTCTCAACCCACATAGAAAACTGTCACATAAACTCCACTTGCTACTGCGACATTTGTGACCAGAGATTCGGGAGCCCAGCAGGCTTGCAACTTCATCTTAGCCGAGGTCACAACAGGTTCTTCCAACCATACCCTGAGTGTGATCTCTGCGGTCGCATATTCACCAGGAAGCAAAACGTGGTCTCTCACATGGTGACCGTTCATTTACAGGGTGTAGGGCCGCAGATTCGGTGCAATATTTGTTCAAAGACATTCACATCTGATAGGAATCTGAGGCGGCATTTGAATCAATTGCACAATCCGGACGTTGAGTGTCCGACTTGCGATTATTGCGGCAAAGTGTTTAAAGGGAAACATTCTTTGATAGCTCACATGCAAGTTAGTCATAATCCGTTGAAGGATGTCATAAAATGCGACCTCTGTGAGAAGGTATACACGAATAACAGAAATCTGAAGCGGCATGTTGAAATGTTTCATGGGGAGAAGGAAGAGTTTAGATGTGATAGGTGCCCTAAGGTGTACACGTCGAATCAGAGCCTAAGACGACATGCCAGAACTAGGCACAATAATGACGACTACATCTTCCACCCCAATGTTGAGGTTATAGAAATTGATGACACGAACGATGCGTTATATACCTGTCAAACACTAGAGTTCCCTTGCCAATATTGTGATAAGCATTTCGCTGAAGAGCCCATGTTACGACAGCATGTGAAAGACGAGCATCCCTTTAACATCTTCTATGAATACTGTAAGAATTCTTTGCTTAAACAAATGCCAGCTGAACCAGAACACAAACCTGTCCCTGTGTATAATTGTGAGAATTGCAGCTCGGTTTTTAACTCAGTTTATGAACTAAAAGACCATATGAAGACCAGTCATGATAGAGAGTACTCTATAAGCACTTGCAATGTCTGTTTTAAAAAGTTTCACAGCAAGGAGACGATGTTTGAACATAAGAAGAAGTGCTTGCCTCCTCCAGGGGTGAACAGTTGCAATCATTGTGACAAACTCTTCACTGATATCTCGAGTTTAGAGTTTCATATCCGGATATTCCATCCGCAAGCTCAGATAGCCGACAACGACGTGAGCTCAACGAATCTCGAAGACGCGTTCGTCGAAGCTGGATCTTTTAAATGCGAGCATTGCGATAGGATCTACTACAGCGATCGTTCACTAAAGCATCACATTAAACTAAAACACACAACAGACGAGGTCGTAGACTGTGGTCTGTGCGGGAAAATCTGCAGCAACAAATACTATTTGGCGTCGCATATCAAAATCGTCCACAATAACGATTCTTGGTCCAAATGCGATTACTGTCACAAGCAATTCAAATCCAAAAGGAACATCAGACGTCATATTGAGTATACGCATTTGGGTATGCAACGATACAAGTGTATCGAATGCGAGAGTCTGTTTAAAGAGAAGCGCAGCCTCAGAAAACACGTGAGGACGAAGCATCCAAATTCAACAGTCTTCCCTCAATGCCATATATGCCATAAGAGGTTCGAATCTGCCAAATCTTGCAAGATACATCTAAAACTCTTGCACTCGTTTAACATGAACACTTATCCTTGCGACCTCTGTTCGGTTTCCTTCAGTTCCAACGAAGCTTTAAGCATACACTTGCGAACTAAACATCTCGCTGAAGACCAGATCTACAAATGCGAGCCTTGCAACCTAGTCTTCAACGGCCAGGAGAGATTCGACCACCATAACGATGTCTGCCACGTCAATTTGCTGCCAAATCTTAAGCAAAAGATCCTCCCGCGTTGCATCATCTGCATCAAGGACTTTAGCACCCGTAAAACATTGAAGCGACACATCAAAAAGTTTCACGACACTTTCGATCCGGAAGAGTTAGCGACTTACGGGTCTCAAAAGAGGTCTTTCAACATAGAATGTGAGGAATGCATACACAATTTCAGCGACGTGTTCTATTACGATGTGTACCAGAAGCTTAAGCATTTGAAAGACTCCATTGTCTTCAAATGCGAGAGCTGTGGCTCATCGTACGACTGTCTAGAATATTCTATACAGAGGTACAAAATTATGAATTTGGAAGCTTGTAAGAGTAAGATGATATTGAGCGAGTTGTGTACGACGGAGATGAGTGACGATGAAGCATCGAATAGTGGGTTGGGGGTAGAATTTATGGAACCAGAAAGCACAACAGGGGATATTAGTGTCAAAAAGGAGTCTGATTTTGAAGGTGATGTGAAAGTTGAGCTTGACGCGTGA
- Protein Sequence
- MASPEYECDYCTRSFTRKYNLSTHIENCHINSTCYCDICDQRFGSPAGLQLHLSRGHNRFFQPYPECDLCGRIFTRKQNVVSHMVTVHLQGVGPQIRCNICSKTFTSDRNLRRHLNQLHNPDVECPTCDYCGKVFKGKHSLIAHMQVSHNPLKDVIKCDLCEKVYTNNRNLKRHVEMFHGEKEEFRCDRCPKVYTSNQSLRRHARTRHNNDDYIFHPNVEVIEIDDTNDALYTCQTLEFPCQYCDKHFAEEPMLRQHVKDEHPFNIFYEYCKNSLLKQMPAEPEHKPVPVYNCENCSSVFNSVYELKDHMKTSHDREYSISTCNVCFKKFHSKETMFEHKKKCLPPPGVNSCNHCDKLFTDISSLEFHIRIFHPQAQIADNDVSSTNLEDAFVEAGSFKCEHCDRIYYSDRSLKHHIKLKHTTDEVVDCGLCGKICSNKYYLASHIKIVHNNDSWSKCDYCHKQFKSKRNIRRHIEYTHLGMQRYKCIECESLFKEKRSLRKHVRTKHPNSTVFPQCHICHKRFESAKSCKIHLKLLHSFNMNTYPCDLCSVSFSSNEALSIHLRTKHLAEDQIYKCEPCNLVFNGQERFDHHNDVCHVNLLPNLKQKILPRCIICIKDFSTRKTLKRHIKKFHDTFDPEELATYGSQKRSFNIECEECIHNFSDVFYYDVYQKLKHLKDSIVFKCESCGSSYDCLEYSIQRYKIMNLEACKSKMILSELCTTEMSDDEASNSGLGVEFMEPESTTGDISVKKESDFEGDVKVELDA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00021510;
- 90% Identity
- iTF_00021510;
- 80% Identity
- iTF_00021510;