Basic Information

Insect: Adoxophyes honmai
Gene Symbol: -
Assembly: GCA_005406045.1
Location: BHDV01002643.1:104-5132[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.0017 0.094 13.4 2.0 1 22 183 204 183 204 0.95

2 19 0.00036 0.02 15.5 2.4 1 23 317 339 317 339 0.98

3 19 0.69 39 5.2 4.3 3 21 347 365 345 368 0.89

4 19 0.00032 0.018 15.6 0.2 1 23 373 395 373 395 0.98

5 19 0.00017 0.0095 16.5 1.3 1 23 401 423 401 423 0.98

6 19 0.00017 0.0096 16.5 0.3 3 23 548 568 546 568 0.97

7 19 0.013 0.77 10.5 3.3 1 23 574 596 574 596 0.97

8 19 0.002 0.12 13.1 0.6 1 23 602 624 602 624 0.97

9 19 0.022 1.2 9.9 2.5 2 23 652 673 651 673 0.96

10 19 5.9e-05 0.0034 18.0 3.5 1 23 722 744 722 744 0.98

11 19 0.0011 0.06 14.0 1.3 2 23 751 773 750 773 0.95

12 19 7.5e-05 0.0043 17.6 0.3 1 23 778 800 778 800 0.98

13 19 7.4e-06 0.00042 20.8 2.0 1 23 806 828 806 828 0.98

14 19 2.1e-06 0.00012 22.5 2.1 1 23 834 856 834 856 0.98

15 19 0.00019 0.011 16.4 0.8 1 23 862 884 862 884 0.98

16 19 0.098 5.6 7.8 1.0 1 23 890 912 890 912 0.98

17 19 5e-07 2.8e-05 24.5 0.6 1 23 918 940 918 940 0.97

18 19 1.8e-05 0.001 19.6 0.3 1 23 946 968 946 968 0.98

19 19 0.64 36 5.3 5.4 1 23 974 997 974 997 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.0017	0.094	13.4	2.0	1	22	183	204	183	204	0.95
2	19	0.00036	0.02	15.5	2.4	1	23	317	339	317	339	0.98
3	19	0.69	39	5.2	4.3	3	21	347	365	345	368	0.89
4	19	0.00032	0.018	15.6	0.2	1	23	373	395	373	395	0.98
5	19	0.00017	0.0095	16.5	1.3	1	23	401	423	401	423	0.98
6	19	0.00017	0.0096	16.5	0.3	3	23	548	568	546	568	0.97
7	19	0.013	0.77	10.5	3.3	1	23	574	596	574	596	0.97
8	19	0.002	0.12	13.1	0.6	1	23	602	624	602	624	0.97
9	19	0.022	1.2	9.9	2.5	2	23	652	673	651	673	0.96
10	19	5.9e-05	0.0034	18.0	3.5	1	23	722	744	722	744	0.98
11	19	0.0011	0.06	14.0	1.3	2	23	751	773	750	773	0.95
12	19	7.5e-05	0.0043	17.6	0.3	1	23	778	800	778	800	0.98
13	19	7.4e-06	0.00042	20.8	2.0	1	23	806	828	806	828	0.98
14	19	2.1e-06	0.00012	22.5	2.1	1	23	834	856	834	856	0.98
15	19	0.00019	0.011	16.4	0.8	1	23	862	884	862	884	0.98
16	19	0.098	5.6	7.8	1.0	1	23	890	912	890	912	0.98
17	19	5e-07	2.8e-05	24.5	0.6	1	23	918	940	918	940	0.97
18	19	1.8e-05	0.001	19.6	0.3	1	23	946	968	946	968	0.98
19	19	0.64	36	5.3	5.4	1	23	974	997	974	997	0.90

Sequence Information

Coding Sequence: ATGAATTTCAACGCTGTCTGTCGAACTTGCTTAGCTAATGGAAATTTGATTCCAATATTTGCGGGATCCGTCGATCATAAGCGTTATACTGCTGCTATTTTTATCACCACTGgcataaaaGTGTACATAGACGATGGGCTGCCGCAGAAAATGTGCACAAGCTGTATCAGCTTTTCAAACGACTCTCTGAAATTCAGGAAACAATGCAAAGACGCTCAAGCCACCCTGTTGCAAGTAAAGCAAGAATGGGGCAATGCAGCAGAGAGAGTGGACAGTGCAGCAGCACACAGCAAAGACTGTAATGGTGAAGGCTTGCGGTTAGAAACAAAAACTGGGGACGAGAGGAAAACAGATGAAGATGTATCCATTAAAAGTGAGGATGATAGTGAAGCTGAGGATTACAACTCGGAGGCTCTGTACACGGCAGAAGAGGATCTGTTCCAGCTGCCGGGGGCCGAGGCCGCGCCTGCGGGCCCCCCGCCGCAGCTCGCGCTCGGCTGCTTCGTGAGGCTGGAGCGCTTCCCCTTGCAAGAGTTCCTGCACTCGCACACCTGCGAGACTTGTCTCGTGACCTTCAGCAGCCCATCCAGCCTGAACAGCCACCAATGCACCAGCTCAGTCGAGGAATATGTTGATAAAATCAATGATGATACAACTGAAATGAGATTTCAAAGCTTTTGTGCCAAAGATTTAGACATTCTTGGTGAATCCAAGAAAGTccagatagaaaaaaaatttgCTACGCACAGTGCGAAAGAGGATTGTGAAAATCTGGTTCCACATTCTTCTGATGATGTGGAATTAGTCAGACAAGATGAAAATTCTTATTTCGTCAATAATTGTGTATTGGACAGCTCTGATATAATATGTTCCCAAGATTTTTCTACCAATACTAGTTTCGATCCACAAAGCTCTGTGAATAATGTGCAGCGAAAGCATCAAGTGAAGTACAGTTGCCACTTATGCAAGGAGGAGTTTGGTCAAAAACTTCTACTGCGTAAACACATGAAAGGCCATGCTGATAAAAAACCTATATCATGCATCATCTGCAACAAGCAGTTCAAAAAGAAAAAAGCATTATCGTACCACATAAAATGCCACCATACACCTCTTAAGTACAGCTGTGACGTATGTAAGAAGGGTATGGTAAACAAAGTAGATCTAGTCAGACACATGCTCACACACACGGGAGAGAAGTGTTACAGTTGTGATTTGTGTAAAAAAGAGTTTGCGCTGAAACACAGTTTGGCCAAGCATATTGAGAGCCACACTGCAAAACCACAGCTCTCTTGTAAAGTTACAAAAGAAACAGAACTCTGTAGCAAGCCATTGAATAATCACAGTGCGAAAGAGGATGGTGATAATCTGGATCCACATCGTTCTGATGATGCCGAATTAGTCAATGAAGATGAAAATTCTCACTCAGCCATTGAGAGTGTATTGGATAGTTCTGATATATGTTCGCAAGAATTTTCAACCAGCACAAGCTTCATCAAGCCATTGAAAAGTGCGCTTACACGAAGAGCTAAGAACAATAAGACTACCAAGAAAAACAGATTTGACATCCACCGAAAACCATTTACGTATCCCTCTGAAATGATTGGCCGCACAACACTGCACTCTGGAGAGAAACCATATGGCTGCGATGTTTGTAAGAAGCAGTTTATATTCAATGGCAATTTGATTTCACACATGAATCTGCATATTGGAAAGAAGTACCACTCGTGCGGAGTCTGTGGCAGGTGGTTCGGGCGTAAAGACCATCAGACTAGACATGTAAAAACACACAAGGGAGTGCAGCTTTATAGGTGCGATATTTGTAGAAAGGATTTCGCACTAAAGCTTCATCTAGCCGAACACATAGAAAATCATAACACCGAAAAACTATCTTCTAGGAAAAGGAGACATGTGGCTGACCAAACGCGAACACGGGCTGGCGAGAAACCAATAATACCCTGCGACAtctgcaacaaacagtttaaatGTAGTAAGTCCTTCGTGAAACATTTGCTTTCACACACGGGTGGGAACACATACATTAGCGATACGAGTAAGAAGGATTTTGCACCAAAGAGTCAGTTGAAAAAAGTCTCTAAAGTTAAAACTGACCAAAATATTTTGTCCGGCAAAGCTACGAGTGACAAGAACACAAAGAAAGTGAAGTACAGTTGCCACATGTGCAAGGAGGAGTTCGAACAAAAACGTCAACTGAGTAAACACATGAAAGGCCACGCTGACCAAAATCCTATATCATGCAGCATCTGCGACAAGCAGTTCACAAAGAAGAAAGTGTTCTCGTACCACATGAGAGCCTACCACATGGCTCGTAAGTACATCTGTGACATATGTAATAAGGGTAAGGTACGCAAATCCGATCTAGTCAAACACATGAGAGTGCACACGGGTGAGAAACCTTACGTTTGTCATGTCTGCGGGAAGCAGTTTACACATGACAGTGGTTTGGCAAAGCATGTCCGTTTGCACGGTGGATACCGGCCCTATCCTTGCACAGTGTGTAGCAAGCGGTTCACAGTAAGCGAACATCTCAGTAGACACATGCTCACACACACGGGAGAGAAGCGTTACAGTTGTGATTTGTGTAAAAAAGAGTTTGCGCTGAAACACGCTCTGGCCAAGCATATTGAGAGCCACATTGCAAAACCTAAGTTCTCTTGTAAATTCTGCAGTAAGCTGTTTTGGAGTCAGGCAATTTTGACTAAACATATACGGATTCATACTGGTGAGACACCGTTCGCTTGCAGTGTCTGTGGTAAGAGGTTCAAAGTAAAAAGTGGTTTGACTTCACACATGCTTACACACACGGGCGAGAAGCTGTTCAGCTGTGAAGTGTGCAAGACGGCATTTCCACGCAAGAACGCTCTAGTCACACATATGAAAATTCACAGCGGTGAGAAGGAGTTCGCTTGCGACGTCTGCAATAAATATTTCAGGCATAAACATGTGAGGAACAATCATGTACTTCATGTCCATAAAGTTAATGTTGGAAGTgttggtaaaaataataaataa
Protein Sequence: MNFNAVCRTCLANGNLIPIFAGSVDHKRYTAAIFITTGIKVYIDDGLPQKMCTSCISFSNDSLKFRKQCKDAQATLLQVKQEWGNAAERVDSAAAHSKDCNGEGLRLETKTGDERKTDEDVSIKSEDDSEAEDYNSEALYTAEEDLFQLPGAEAAPAGPPPQLALGCFVRLERFPLQEFLHSHTCETCLVTFSSPSSLNSHQCTSSVEEYVDKINDDTTEMRFQSFCAKDLDILGESKKVQIEKKFATHSAKEDCENLVPHSSDDVELVRQDENSYFVNNCVLDSSDIICSQDFSTNTSFDPQSSVNNVQRKHQVKYSCHLCKEEFGQKLLLRKHMKGHADKKPISCIICNKQFKKKKALSYHIKCHHTPLKYSCDVCKKGMVNKVDLVRHMLTHTGEKCYSCDLCKKEFALKHSLAKHIESHTAKPQLSCKVTKETELCSKPLNNHSAKEDGDNLDPHRSDDAELVNEDENSHSAIESVLDSSDICSQEFSTSTSFIKPLKSALTRRAKNNKTTKKNRFDIHRKPFTYPSEMIGRTTLHSGEKPYGCDVCKKQFIFNGNLISHMNLHIGKKYHSCGVCGRWFGRKDHQTRHVKTHKGVQLYRCDICRKDFALKLHLAEHIENHNTEKLSSRKRRHVADQTRTRAGEKPIIPCDICNKQFKCSKSFVKHLLSHTGGNTYISDTSKKDFAPKSQLKKVSKVKTDQNILSGKATSDKNTKKVKYSCHMCKEEFEQKRQLSKHMKGHADQNPISCSICDKQFTKKKVFSYHMRAYHMARKYICDICNKGKVRKSDLVKHMRVHTGEKPYVCHVCGKQFTHDSGLAKHVRLHGGYRPYPCTVCSKRFTVSEHLSRHMLTHTGEKRYSCDLCKKEFALKHALAKHIESHIAKPKFSCKFCSKLFWSQAILTKHIRIHTGETPFACSVCGKRFKVKSGLTSHMLTHTGEKLFSCEVCKTAFPRKNALVTHMKIHSGEKEFACDVCNKYFRHKHVRNNHVLHVHKVNVGSVGKNNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -