Ahon002135.1
Basic Information
- Insect
- Adoxophyes honmai
- Gene Symbol
- -
- Assembly
- GCA_005406045.1
- Location
- BHDV01021776.1:219183-223214[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 27 0.0064 0.36 11.6 2.5 1 23 10 32 10 32 0.97 2 27 8.4 4.8e+02 1.7 0.2 2 23 58 82 57 82 0.80 3 27 0.33 19 6.2 0.1 3 23 106 127 104 127 0.93 4 27 0.00025 0.014 16.0 0.3 2 23 133 155 132 155 0.95 5 27 3.8 2.2e+02 2.8 1.0 3 11 162 170 161 183 0.81 6 27 0.00049 0.028 15.1 2.5 3 23 220 241 218 241 0.97 7 27 0.35 20 6.1 1.3 2 23 248 269 247 269 0.94 8 27 0.00028 0.016 15.8 0.3 1 23 275 297 275 297 0.96 9 27 1.7e-06 9.5e-05 22.8 1.1 1 23 303 325 303 326 0.96 10 27 0.0019 0.11 13.2 2.5 1 23 364 387 364 387 0.95 11 27 0.04 2.3 9.1 0.2 3 23 415 436 414 436 0.95 12 27 0.25 14 6.5 0.7 2 23 459 481 458 481 0.93 13 27 0.027 1.5 9.6 0.2 1 23 487 510 487 510 0.93 14 27 0.00056 0.032 14.9 3.6 1 23 516 539 516 539 0.96 15 27 0.054 3.1 8.6 0.3 2 23 545 567 544 567 0.91 16 27 0.0018 0.1 13.3 0.8 1 23 574 597 574 597 0.97 17 27 0.00042 0.024 15.3 0.4 1 23 603 625 603 625 0.94 18 27 0.00012 0.0069 17.0 2.0 1 23 631 653 631 653 0.98 19 27 6.6e-08 3.7e-06 27.3 1.2 1 23 659 681 659 682 0.96 20 27 8.3e-05 0.0047 17.5 0.5 1 23 730 753 730 753 0.96 21 27 0.077 4.4 8.2 0.8 2 23 825 847 824 847 0.96 22 27 0.016 0.9 10.3 0.7 3 23 855 876 854 876 0.94 23 27 0.53 30 5.5 2.3 1 21 881 901 881 904 0.77 24 27 0.0041 0.23 12.2 1.4 1 23 909 932 909 932 0.96 25 27 7.2e-05 0.0041 17.7 3.5 1 23 937 960 937 960 0.97 26 27 0.0011 0.06 14.0 0.1 1 23 966 988 966 988 0.98 27 27 0.015 0.88 10.4 0.3 2 23 998 1019 997 1019 0.97
Sequence Information
- Coding Sequence
- ATGCCGTTCCGAAGATACGGGAACGTCTACAGATGCTTCTACTGCCATCTGAACTTCCCACTCGCAAGCGATTTGAAAGAACATTTCAAAGAGCACGAAGAAATGTACATACTAAAGGCTGCCAAAAGATGTCCGCTCCGGCAGGCGGTAAAACTAGACATATCTTATTTGAAATGTAAACAATGCGTTACAGACGCAGAGTTCGCTTCTCTCAAAGATTTGCTGACGCACCTAAACGAAACGCACGCCGAAAACTGCCCCGTAGACTACGAAACGCACGTAGATTGCTTCAAACTTCGTGATGGCCATCTAGACTGCTTAGTATGCGGTGAGAATTTCACATTTTTCGGTCCGCTATTGCTCCACACTTTAAGACTTCACAAGAGAATGCGACTCATATGCGAAATTTGCGGCCAGTCCTTCGCTACCAAATTCAGCATTAACAAACACAAAGAAACCGTTCATGCCACTGATGCAGCCAACTGCAGACATTGCGATAAAAAGTTCCCAGCAGTCCACAGAAGAGACGATCACGAGAGAAGAATCCACAACGTCAAAGAACGACAGTGCCAAATATGCGGCGAAGTCCTGGGCAGCATATACAAGAGAGACTCCCATTTAGCAGCAGTCCACGACATCAAAATATCCACGTTTGGCTGTGAAAGGTGTCCCAAAGTGTTTAGGTTTCAAAACCATCTGGTAAAGCATTTCAGGAGGGTACATTTGAAAGAGAAAACCAAAGTTTGTGACGTCTGCGGAGACAAGTTTTTCGATAATCATTTGTTGAGTTTGCATAAAGTCAAGCACAGTGACGAGAGGCCGTTCGAATGCATCATTTGCTCCAAGAAGTTTCCTAGAAAAAGAGCGTTGGACATACACATGAGGATACACACGAACGACAGGAGGTTCGTGTGCAAGGTCTGCGGGAAGGCGTTCGTGCAGAGCACTAGCCTGAAGGTGCATTCGAGAGTGCACCACGACGAGCAAAAAGACAACATTGAGGTCCGAAACCGCGAAGACCTCGTCCGACTGCTCACCGTTATCATTCAATACTCCACCGCCACACCTTTCAAATGGCACTCCAACAAGTACATGTGCTTCTACTGCTCTTGCCCCTTCGAAGACAGCGGCACCTTGAAGCGACACACCAAAGAGGAGCACGAGGATGCCAAACTCAACACCGTCCTCCAGTCCACAGTACGCAAAAGCAGAAGCATCAAAGTGGACGTCACAGATGTGGCTTGTAAAAAATGCGGCGTGTCCATGTCGAGTCTACAAGAGCTCTTGCGTCATGTGAGGGATATTCACGGTTTAAGAGTGAATGACGAAGCAGCAGATTGCGTGTATCCGTTCGTTCTCTCAGAAAACGGCATGTCTTGTTTAGAATGTGGAATGGCGTTCAAGTTCTTCGGCCCCCTTTTGATCCATACTCACAAATACCACAGCAAAGCTAAGCAGTTCTTATGCGAACATTGTGGGCAAGGTTTCATCGCGCGCGCGAATGTGGACAGCCATATCAAAAACGCGCATTCAACGCTGTGTTCCTTCCAATGCAAGGAATGCGATCAGACCTTCTCGACGACTTTCAAACTGTATCATCACGTTGAGAAGGCGCACGGGCCCGCCCGAATGAAGTGCCCGAAATGTCCGGAAATACTGAGCAGTAGCTATCTAAAAAAGCGACATCTAGCTTTTGTACACGACGTTAAGAGCGCCCAATTCCAATGCGACTTGTGTCCGAAGATTTTCACTTTGAAAAGCAAGGTTTTATCTCATAAACAGAGGGTGCATTTGAAAGAAAAGAACTTTGCGTGTGAAATATGTGGATTCAAAGTGTTTAGTAAAGAGCTTTTGACGCGGCATATGGTGAAGCATGATGATTCGCGGCCGTTTGAATGTGATCTGTGTAAAAAAGCATTCCAGAGGAAGAAGACTTTAGTGTATCATAGGAGGATACACACTAATGACAAGAGGTATCAGTGTAAGGAGTGCGGGAAGGCGTTTGTCCAGTGGACGAGTCTGAAATTGCACTTGAGGGTGCACCACTCGGGGACTGACCAAAAACCGAAAACGCACGACATACGCGTCCCAACGCAGGACGACTGGCGGCTCGCGGCAGCTCGTAAGTACGTGCACGCAGTACTCTCCAACTCTTCTCTAATGCCGTTCAGATGGCGCGGCAACCGCTACATCTGCTTCTACTGCTACCAAACGTTCATCGACGCATCATCACTCCGAGCCCACACCAGGGGAAGTCACAAGGGCATCGCTATCATGAAACATCTCACACAAAACCGGAGCTCCGAATTCTCACCTATAAAAGTCGATATCGGCGAACCGCTCATCTGTTCCAAATGCAACCACATAGAATTAACCCTAGAAGGTTTAGTTGCTCATTTAAAGGGACACAAGTTGATAGCTGACATGGAGCAAGAATACTTCTTGCCGTTCAAGCTAGCTGACAACCAGATCTCTTGTCAGAAATGCGCGAAATCCTACCAATTCTTCGGTATGCTCTACTCCCACATGAACAAAGTGCACTTGGAAGGCACGAAGCGCATCTGCGAGACGTGCGGACAGAACTTTTTCTCAGATTTCAGTCTGCGAAAGCATGTCCAACTCTACCATCAGTCAGCCGACTTCAAATGCAAGCACTGCGATGCTACTTTCCAGCTGGATTCCAACAGAGTCAGCCACGAGTTCAAAGAGCATAACATAAAGACTTTCAAATGTTACAAATGTGACGAGATGTTCGGATCGCAATATCTGAGGAGACTGCACATGAATGGTACGCATTTGAAAGCGGATTTCACGTGCACAGAGTGTTCGAAAACCTTCCTCCACAAGTCTTTGCTCACTCGGCATATTAATAGGGTGCATCTGAATGAGAAGAAGTACTCCTGCCCGATTTGTGCAGAAGGTTTTTATGATTTGCCGTCGCTGAACATTCACACGAAGAAGCATTCGAAGGTGGCGCAAGTCCTTTCGTTGCAGTGCAAGGTTTGTATGGGGAGCTTCAGCAGCAAGGTTGAGTTGGATGATCATATGACGACACATAGCGGGCAGTCGCTATCCTCGAAGTAA
- Protein Sequence
- MPFRRYGNVYRCFYCHLNFPLASDLKEHFKEHEEMYILKAAKRCPLRQAVKLDISYLKCKQCVTDAEFASLKDLLTHLNETHAENCPVDYETHVDCFKLRDGHLDCLVCGENFTFFGPLLLHTLRLHKRMRLICEICGQSFATKFSINKHKETVHATDAANCRHCDKKFPAVHRRDDHERRIHNVKERQCQICGEVLGSIYKRDSHLAAVHDIKISTFGCERCPKVFRFQNHLVKHFRRVHLKEKTKVCDVCGDKFFDNHLLSLHKVKHSDERPFECIICSKKFPRKRALDIHMRIHTNDRRFVCKVCGKAFVQSTSLKVHSRVHHDEQKDNIEVRNREDLVRLLTVIIQYSTATPFKWHSNKYMCFYCSCPFEDSGTLKRHTKEEHEDAKLNTVLQSTVRKSRSIKVDVTDVACKKCGVSMSSLQELLRHVRDIHGLRVNDEAADCVYPFVLSENGMSCLECGMAFKFFGPLLIHTHKYHSKAKQFLCEHCGQGFIARANVDSHIKNAHSTLCSFQCKECDQTFSTTFKLYHHVEKAHGPARMKCPKCPEILSSSYLKKRHLAFVHDVKSAQFQCDLCPKIFTLKSKVLSHKQRVHLKEKNFACEICGFKVFSKELLTRHMVKHDDSRPFECDLCKKAFQRKKTLVYHRRIHTNDKRYQCKECGKAFVQWTSLKLHLRVHHSGTDQKPKTHDIRVPTQDDWRLAAARKYVHAVLSNSSLMPFRWRGNRYICFYCYQTFIDASSLRAHTRGSHKGIAIMKHLTQNRSSEFSPIKVDIGEPLICSKCNHIELTLEGLVAHLKGHKLIADMEQEYFLPFKLADNQISCQKCAKSYQFFGMLYSHMNKVHLEGTKRICETCGQNFFSDFSLRKHVQLYHQSADFKCKHCDATFQLDSNRVSHEFKEHNIKTFKCYKCDEMFGSQYLRRLHMNGTHLKADFTCTECSKTFLHKSLLTRHINRVHLNEKKYSCPICAEGFYDLPSLNIHTKKHSKVAQVLSLQCKVCMGSFSSKVELDDHMTTHSGQSLSSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -