Ahon001199.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Adoxophyes honmai
Gene Symbol
-
Assembly
GCA_005406045.1
Location
BHDV01048008.1:91-18454[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 21 0.031 1.7 9.4 0.4 1 23 87 109 87 109 0.97
2 21 0.0021 0.12 13.1 4.1 2 23 116 137 115 137 0.96
3 21 3.5e-06 0.0002 21.8 0.3 3 23 145 165 143 165 0.98
4 21 0.00086 0.049 14.3 3.4 1 23 171 193 171 193 0.99
5 21 0.00097 0.055 14.1 4.4 2 23 213 234 212 234 0.97
6 21 5.6e-05 0.0032 18.0 0.1 1 23 240 262 240 262 0.96
7 21 3.1e-06 0.00018 22.0 0.8 2 23 267 288 266 288 0.97
8 21 2.8e-05 0.0016 19.0 1.3 3 23 296 316 294 316 0.98
9 21 7.6e-05 0.0043 17.6 1.6 1 23 322 345 322 345 0.98
10 21 4.3 2.5e+02 2.6 1.2 3 19 410 426 408 428 0.95
11 21 1.2e-05 0.00069 20.1 3.3 2 23 498 519 497 519 0.97
12 21 2.2e-06 0.00012 22.5 1.1 3 23 527 547 526 547 0.98
13 21 9.4e-07 5.4e-05 23.6 2.3 1 23 553 575 553 575 0.98
14 21 1.4e-05 0.00081 19.9 1.5 1 23 581 603 581 603 0.98
15 21 0.0001 0.0058 17.2 1.7 1 23 609 631 609 631 0.98
16 21 2.5e-07 1.4e-05 25.5 2.2 1 23 637 659 637 659 0.98
17 21 8.6e-06 0.00049 20.6 2.0 1 23 665 687 665 687 0.95
18 21 3.5e-06 0.0002 21.8 2.3 1 23 693 715 693 715 0.98
19 21 0.11 6.4 7.6 0.1 6 23 733 750 731 750 0.95
20 21 3.5e-06 0.0002 21.8 1.4 1 23 756 778 756 778 0.98
21 21 1.4e-05 0.0008 19.9 2.2 1 23 784 806 784 806 0.98

Sequence Information

Coding Sequence
ATGTCTTGTGACTTTTTTGAAGTGAAAATAGAACCAGAGTGGTCTTCTAGAGAGCCCTCGGAAAATGATCAGGAAGACTTGACTGACTCCTATCCAAGGCCCGATGGTTATACAGTCCCTATAGTCAAGACGGAGATACGAGAAACAGCGGAAACAAACGATGATGCTGGCCCTTCTGAAACCACGCAAAATGATGATAACAACCAAGAAATTCAGACAACACAGGACGGCACAACAGAGCTAGGCCTTCGTAAAagATTTCCCTGCCGCCAATGCGGCAAGCCCTGCTGGTCGGCGGCGCGCCTCCGCGTCCATATGCAGGAACACACGGAggcgcgaccgtgttgctgccACTTGTGCGGCGTGAGGCTGGCCTCGCAGGGCAACCTCGAGCGACATCTGTTGACGCATCGGGGCGACAAGCCGTTTGGATGCGCGGATTGTGGACGGAGATTCTCCCAAAAATCGGTTCTGATCAAGCATATTCGCATACACACGGGTGAAACTCCATACTCCTGCGATGTATGTCAGCGGAAATTTGCTCGCAGCTTCACCCTCGCCTGCCATATGCGTACGCACGGAGAAAAGTACGCGAAACCGGACAATCCTAAACCAAAGACTGTACGAGAAAGCTGGACCTGTGAAGTCTGCCACAAAATCTTCAAGAACAAATCCTACAGACACACGCATATGCTCATACACAGCAGAGTCAAGAAGTTCGCATGTGAAATATGCCAGAAAAAATTCGCGAATATAGCTAATTTAGAAAAGCATGGGAACGTGCATTTGAAAGAACTGACCTGCAAAATTTGTGGGAAGGAGATGAAAACACGGTCTAACTTACAAAGACATATGTTGATCCATACGGGTGAGAGACCCTTCGGTTGCACACTGTGTGATAAAAGATTCACACAGAAGAGTGTTCTGGATAAACACCAGAGGATTCATACCGGAGAAATGCCGTATACTTGTGAAGTTTGCTTGAAGAAGTTCTCAAGGAGTTTCACGTTGGATAACCATTTGAGAAGAGTGCATCAGATTGAGAAAGTGGTGACGAGGGATAAGAAGAAACCTGATGGGAAGAAGAGTGTAGTGGTGAATGAGATAAGTGAGCGTGCTGAGAAGGAAGCAGAGGCAGATGCTGATAACTATGTGTATTTAAATGCAGCGTATGATTTAGATGGAAGAGTGACTGAGGAGGTGGCGTGTAAAGCTAAGCAGTATTGGTGTGATAACTGTGATACTTGGTTCGCTACCAGTGACGAGTTTTACAAGCATAGTTGTGATGTGGCTAACAACGGAAATGAATTCACTGACATCAGTGAAATGATTGAAACAGTGATCAAGGAGGAAGTTCCTGAAAGTGAAGAAGTAACTAATGAACCCAGTGAATTTGTTGTACCAGATCTTCCAGTAgctgatagtgaaataaaaaaagatgacAATGTgctacaaattgaaattgaagTGAAAAAAGTGAAAAAGCGATGGAAATGTAAGCAGTGCGGCAAGAAATTCAAAACCAAATCTTTCTACAAAGCCCATGTGAAATCTCACAATGGTGACACTCCTGGTTTCTGCGATATATGCAAGAAGAACTTCAATACTAACGGCAACTTGGTTCGGCATATGCTGACACATTCTGGAGTGAAACCGTTCATCTGCGAATACTGTGACAAATGCTTTACGCAGAAGAGCGTGTTAATAAAACATGTGAGGATACACACGGGTGAGTTACCCTACACCTGTGACGTTTGCGACAAGAAATTCGCAAGGAGCTTCACTCTGTTAAACCACAAAAAAGTACATAGCGAAGTGAAGCCTTTCTCGTGCcagttttgtgaaaaatctttCACACAACGGAGCGCTATGTTGATACATGAGAGAAAACACACCGGTGAGAGACCATTCTCGTGCAATGATTGTGGAAAAAACTTCACGAGCAATAGCACTTTGAAAAGTCATAAACGAGTTCACAGTGAGAATAAAGAGTTTCTATGCGACATATGCTACAAGCAATTCACTACCAGTAGCAATTTTTACAGCCACATGCGGATACATAAAGGCGACAAGAGATTCTCATGCGAAGTTTGCGAAAAGAAGTTTTACACGAATAGCAGTTTAAATAAACACAAGCGTGTCCATACTGATAAGcccCGTCTGGTCCCGGACGCGGGCAAACCGCTGGCGTGCTGGTGCGGCCGGCGCTTCGccgcgcgcgcggcgctgcTCCGGCACGCGAGAGCGCACGCCGCGCCACGGCCGCACGAGTGCCCACAGTGTGACAAACGGTTTGCCCTAAGCGGGGATCTAACTCGCCACCGCCGTTCACACAACGGTGAGAAGCGGTATTCGTGTGAGACTTGTAACAAGCAGTTTACAAGGAACAACACGCTCGTTCAGCACCGTCGGATACATACGGGGGGCGAGGCGCGACTAGAAGTTGGCCCACAAGACAACGCGATTGGCTCGCATCATGGCACGATCGGTCCGCAACGCGGCGCGGTTGACTCGCATCATGGCACGATCGGTCCGCAACGCGGCGCGGTTGACTCGCATCAAGAGTATCAAGACGCGCTTGACTCAGGACACGACGCGATGGGCTCGCAACATAACGTGATTGACTCACGACACGACGCGATTGGTCCGCAACGTGGGGTGCTTGGCTCGCAACGTGGCGTTAAACCGCAACACGACGTTGGCCCGCACGACAACGCGATTAACTCGCTACAAGGCGCGATTGCCCGCGGCACGCTTGGACCGAAACAAGACGCTCTTGGCCCGCAACACGACGCACTGCACTCACGACACAACGCGCTTTACTCGCAACGTGGTGTTAACCCGCAACAGGGCGCGCTTGGCCCGCAACGTGACGCATTGAACTCGCAACGTGACGCGTTTGGCCCGCAACACCGTGCGATTGACTCACAACACGACGTTGACAAGCCACGCGACTTTATCCCGCAACAGGGCGTTAACTCGCAACACGACGTTAACCCGCAACAGGTCGCGATTAACCCGCAACACAACGCTCTTAGCTTGCAACGTAACGCGATTGGCCCGCAACACGACGCTATCGACCCGCAACAAGACACGATTAACCCGCAACACGACGTCGACCCGCAATACATCGCGCTTGGCCCGCAACAAGACGCGCTTGACTACCGACACGTGATGgcgtaa
Protein Sequence
MSCDFFEVKIEPEWSSREPSENDQEDLTDSYPRPDGYTVPIVKTEIRETAETNDDAGPSETTQNDDNNQEIQTTQDGTTELGLRKRFPCRQCGKPCWSAARLRVHMQEHTEARPCCCHLCGVRLASQGNLERHLLTHRGDKPFGCADCGRRFSQKSVLIKHIRIHTGETPYSCDVCQRKFARSFTLACHMRTHGEKYAKPDNPKPKTVRESWTCEVCHKIFKNKSYRHTHMLIHSRVKKFACEICQKKFANIANLEKHGNVHLKELTCKICGKEMKTRSNLQRHMLIHTGERPFGCTLCDKRFTQKSVLDKHQRIHTGEMPYTCEVCLKKFSRSFTLDNHLRRVHQIEKVVTRDKKKPDGKKSVVVNEISERAEKEAEADADNYVYLNAAYDLDGRVTEEVACKAKQYWCDNCDTWFATSDEFYKHSCDVANNGNEFTDISEMIETVIKEEVPESEEVTNEPSEFVVPDLPVADSEIKKDDNVLQIEIEVKKVKKRWKCKQCGKKFKTKSFYKAHVKSHNGDTPGFCDICKKNFNTNGNLVRHMLTHSGVKPFICEYCDKCFTQKSVLIKHVRIHTGELPYTCDVCDKKFARSFTLLNHKKVHSEVKPFSCQFCEKSFTQRSAMLIHERKHTGERPFSCNDCGKNFTSNSTLKSHKRVHSENKEFLCDICYKQFTTSSNFYSHMRIHKGDKRFSCEVCEKKFYTNSSLNKHKRVHTDKPRLVPDAGKPLACWCGRRFAARAALLRHARAHAAPRPHECPQCDKRFALSGDLTRHRRSHNGEKRYSCETCNKQFTRNNTLVQHRRIHTGGEARLEVGPQDNAIGSHHGTIGPQRGAVDSHHGTIGPQRGAVDSHQEYQDALDSGHDAMGSQHNVIDSRHDAIGPQRGVLGSQRGVKPQHDVGPHDNAINSLQGAIARGTLGPKQDALGPQHDALHSRHNALYSQRGVNPQQGALGPQRDALNSQRDAFGPQHRAIDSQHDVDKPRDFIPQQGVNSQHDVNPQQVAINPQHNALSLQRNAIGPQHDAIDPQQDTINPQHDVDPQYIALGPQQDALDYRHVMA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-