Basic Information

Gene Symbol
SMARCC2_1
Assembly
GCA_005406045.1
Location
BHDV01003590.1:293088-333595[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.1e-14 4.9e-11 42.7 0.1 3 44 590 631 588 633 0.95

Sequence Information

Coding Sequence
atggcTACCATAGGCCCCAAGAAAGACGGTGGGCCGAATGTTGAATTTTTCCAGTCGCCGGAATCTTTGGCACAATTCGATCAAATTCGTGTTTGGCTGCAGAAAAATTGCAAAAAGCATGTTCAAACTGACCCACCTACTAAGGAGGGCTTAGCTCAACTTGTTGTCACGCTCATTCAATATCAGGAGAATAAACTGGGGAAAAATGCCACGGATCCACCCTTCTTAAGGCTTCCGATGAAAGTGTTCATGGACATGAAGCCGGGCGGCGCCCTGTGCACGGCGCTCGCCACCATGTTCCGCTTCAAGTCGGAGCAGCGGTGGCGCAAGTTCGACTTCCAGGTCGGTAAGAACCCGTCGCGCAAGGACCTGAACGTCCAGATGATGATGGAGATCGAGTCGGCGCTGCTTGGCGCTGAGGCCATCCGCTCGCCCTGCGTCTACATACGGCCGGACCTCGACAAGGCCCTGGCCAACAAAGTCAAGGATATCGTGGTGAATCACCAGGGAGAGATCTGCGAGGACGAAGAGGACGCGACGCACATAATCTACCCGCCGGTGGACCCGCTGGAGGAGGAGTACGCGCGGCCGGTGTTCCGCCGCGGCAACCACGTGCTGGTGCACTGGTACTACCTGCCCGACAGCCACGACACCTGGACGCAGGCCGACCTGCCGGTGGAAGTCCCGGAGACGGTGAGCTGGGAGAGCGCGCGCTCGGAGCCGTGGCGCGTGGCCGCCGCGTGGGCGCTCGACCTGCCGCAGTACAACGAGTGGATGAACGAGGAGGACTACGAGGTGGATGCCTCTGGGAAGAAGAAGGTGCACAAGCTGCGCCTGTCGGTGGAGGAGCTGATGCCGGGCGGCGAGCCGTCGGGCAAGGGCAAGAAGGGCAAACGCAAGCGCTCGCCCTCGCCGCCACCCCAGAAGCATGCTAAGCGGAAGAGTCGCATTACGAAGCGGCGCGATAACGACGGCGAGGACGAAGAGGATAACGCTTCCCGCGACAACACCGATGCCGCCCCGACGCCCGAGGCCGAGCGCTCCGCCGACCGGGAGAGCGCGGAGCCCCCGGCggcggaggcggcggcggccgagGCGCCGGCCACGCCCGCGCCCGTGCTGGACGCGCACGACGACTCGCAGGGCAAGCACAGCGACTCCAACACGCAGGAGACAGTAGTGAAGGAGGAGATGGAAGACAACGTGACCGATCAGACTCACCACATCGTAGTGCCGTCCTACTCGGCTTGGTTCGACTACAACTCCATACACACCATAGAGAAACGCGCTATGCCTGAGTTTTTCAACGGGAAAAACAAGTCTAAGACTCCAGAGATTTACCTCGCTTACAGGAATTTCATGATCGACACGTACCGTCTGAACCCGACGGAGTATCTCACCAGTACAGCCTGTCGTCGCAACCTGGCCGGAGATGTTTGCGCCATCATGCGCGTACACGGCTTGCTCGAACAGTGGGGACTTATCAACTACCAGCTGGAGCCGGAATCCCGCCCTACAGCGATGGGTCCCCCGCCCACGTCGCACTTCCACGTGCTGTCCGACACGCCCTCCGGCCTGCAGCCGCTCGCGCGCCCGCCCATGCCGCGCCCCGTGGAGAACGCGGCCGTACCCAAGATGGAGGCGGGACTGCCGAACGGCGCGGACGCgggcgcgccggccgccgccgtCAAGGCCGAGAGCACGCTGGAGCTGGGCGGCGCGCCCGGCCTCAAGCTGGACCAGTACCGCATGGGCGCGCGCGGGCGCGAATGGACCGAGCAGGAGACGCTGCTACTACTAGAGGGACTCGAGTTACACCGCGACGACTGGAACAGAGTCGCGGCGCACGTCGGCTCGCGCACGCACGACGAGTGCATACTGCACTTCCTGCGGCTGCCTATCGAGGAGCCCTACCTGCAGGATGACGCCTCCGGCGGCGTGCTGGGCCCGCTGGCGTACCAGCCGATCCCGTTCAGCAAGGCGGGCAACCCCGTCATGAGCACGGTGGCCTTCCTCGCGTCCGTCGTCGACCCGCGCATCGCGGCCAAGGCCACGCGCGCCGCTATGGACGAGTTCGCCGCTATCAAGGACGAGGTGCCCGCGGCCATGATGGAGGCGCACGTGAAGGCGGCCGGCGCGCACGGCCCGgccgccgcgctcgccgccaCCGGCATCGCCGGCACCGCGCCCGACGTGCCCGTGccagAGAAAAAAGAAGGCAGCGCTGAAGTAAAGACCGAGGCCATGGATGTGGAGGAGCCCGAGGTGAAGCCGAAGGAGGAGCCCGCTGAAGCACCCGCGTCTGACGAAGCTAAGGACACCAAGGacacgccgccgccgcagcccgAGGGCCCGGCGACTGTGGACGCTAAGCTGCAATCCGCCGCGTCGGCCGCGCTGGCCGCCGCGGCCGTCAAGGCCAAGCACCTCGCCGGCGTCGAGGAGCGCAAGATCAAGTCTCTTGTCGCGCTGCTCGTCGAGACGCAGATGAAGAAGCTGGAGATCAAACTGAGGCACTTCGAGGAACTCGAGGCCACCATGGAGAGGGAGAGAGAAGGACTGGAGTACCAGCGGCAACAACTCATCCAGGAGCGGCAGCAGTTCCACCTGGAGCAGCTGAAGGCGGCCGAGTTCCGCGCGCGCCACCAGGCGCACCAGAGGATGCAGCAggagggcggcgcggcgggcgcgggcgcggagcAGCCGGCGGGCGAGGCGCCGGCGCCGCACGCATag
Protein Sequence
MATIGPKKDGGPNVEFFQSPESLAQFDQIRVWLQKNCKKHVQTDPPTKEGLAQLVVTLIQYQENKLGKNATDPPFLRLPMKVFMDMKPGGALCTALATMFRFKSEQRWRKFDFQVGKNPSRKDLNVQMMMEIESALLGAEAIRSPCVYIRPDLDKALANKVKDIVVNHQGEICEDEEDATHIIYPPVDPLEEEYARPVFRRGNHVLVHWYYLPDSHDTWTQADLPVEVPETVSWESARSEPWRVAAAWALDLPQYNEWMNEEDYEVDASGKKKVHKLRLSVEELMPGGEPSGKGKKGKRKRSPSPPPQKHAKRKSRITKRRDNDGEDEEDNASRDNTDAAPTPEAERSADRESAEPPAAEAAAAEAPATPAPVLDAHDDSQGKHSDSNTQETVVKEEMEDNVTDQTHHIVVPSYSAWFDYNSIHTIEKRAMPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHGLLEQWGLINYQLEPESRPTAMGPPPTSHFHVLSDTPSGLQPLARPPMPRPVENAAVPKMEAGLPNGADAGAPAAAVKAESTLELGGAPGLKLDQYRMGARGREWTEQETLLLLEGLELHRDDWNRVAAHVGSRTHDECILHFLRLPIEEPYLQDDASGGVLGPLAYQPIPFSKAGNPVMSTVAFLASVVDPRIAAKATRAAMDEFAAIKDEVPAAMMEAHVKAAGAHGPAAALAATGIAGTAPDVPVPEKKEGSAEVKTEAMDVEEPEVKPKEEPAEAPASDEAKDTKDTPPPQPEGPATVDAKLQSAASAALAAAAVKAKHLAGVEERKIKSLVALLVETQMKKLEIKLRHFEELEATMEREREGLEYQRQQLIQERQQFHLEQLKAAEFRARHQAHQRMQQEGGAAGAGAEQPAGEAPAPHA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01508014;
90% Identity
iTF_00462343;
80% Identity
-