Ahon002393.1
Basic Information
- Insect
- Adoxophyes honmai
- Gene Symbol
- -
- Assembly
- GCA_005406045.1
- Location
- BHDV01005067.1:84131-84484[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-07 0.00019 21.3 0.0 5 35 1 31 1 39 0.92 2 2 7 8.4e+03 -3.2 0.0 33 42 102 111 102 112 0.80
Sequence Information
- Coding Sequence
- ATGGATGCGGCTATTGACGAAGTTTTGAAAGGAGCAGCTGTCAGGACAACAGCTAGAAAATATGGTGTTCCCCGGGCGACTTTAGTCGACAAATCAACAGGGAGATCACCACGCTATTGTCGGAAGGGGCCAAAGGCCTATTTGCCCGCAGATACTGAAAAAGATTTGGCTGAATGGATCAAAGAGGTAGCTGAAAATGGACGTCCAATAAATAGGACGAAGTTACGGGATACAGTGAAGAAAATTGTAGAAGATAAGAAGTTAATCACACCGTTTAGAAACAACCGTCCGGGCATTCGTTGGCTGCAGAGTTTCATCAGAAGAAATCCTGATGTCTGCAAGAATTTGGTGTGA
- Protein Sequence
- MDAAIDEVLKGAAVRTTARKYGVPRATLVDKSTGRSPRYCRKGPKAYLPADTEKDLAEWIKEVAENGRPINRTKLRDTVKKIVEDKKLITPFRNNRPGIRWLQSFIRRNPDVCKNLV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00021273;
- 90% Identity
- iTF_00021273;
- 80% Identity
- -