Basic Information

Gene Symbol
kn
Assembly
GCA_005406045.1
Location
BHDV01032898.1:375909-383593[-]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.7e-118 2.7e-114 382.8 0.0 210 387 38 233 35 237 0.99
2 2 5.5e-10 5.6e-06 25.1 8.3 420 561 242 393 234 410 0.59

Sequence Information

Coding Sequence
ATGCAAGCGATGCAAGGAAGTGCATATCCATTGGAAGAGTTTCGTCCATTTGAGCCCCGAGACATTGGCTCCTCCTCCCAAGGGACTCTCCCTTTCGGTGTCTGTGCATGTGTGGTAATATCAACGCAAGTGATGGTGGATGGGCCGTTGTTAGCGATATCGGACAACATGTTTGTCCATAACAACAGCAAGCACGGCCGCCGCGCCAAGCGGCTCGACCCGACTGAAGGTATTGACGCGGCGACAGAAAATCATTCGGGGTTATACCCTCCTCTGCCAGTGGCGACGCCGTGCATCAAAGCGATCTCCCCCAGCGAAGGTTGGACGTCGGGCGGCTCCACCGTCATCATAGTCGGAGATAACTTCTTCGACGGGCTTCAAGTTGTTTTCGGGACCATGCTGGTTTGGAGTGAGttaatAACGTCGCACGCGATTCGGGTGCAGACGCCCCCTCGGCACATACCCGGCGTCGTGGAGGTGACGTTGTCGTACAAAAGCAAGCAGTTCTGCAAAGGCGCGCCCGGCAGATTCGTCTACGTTTCAGCACTCAACGAGCCAACGATAGATTACGGATTCCAAAGATTGCAGAAGCTCATACCGCGGCACCCTGGCGACCCAGAGAAATTACCGAAGGAGATAATTCTAAAAAGAGCAGCAGACCTAGCAGAAGCCTTATACTCCATGCCTCGGAACAACCAGCTGGGTCTCGGCGCCCCAAGATCTCCACCAGCTAGTATGCCCTTCAACTCCTACTCGGGACAGTTGGCTGTCAGCGTCCAGGACACGGCGGCCTCGCAGTGGACTGAAGAGGAATACGCGCGTAGCGGAGGTTCGGTGTCGCCGCGGTATTGCTCGGCGGCGTCCACCCCCCACGCCGCCTCCTACCCCCACCCGCAGCACTACCCGGCACCCCCCACTTCACTGTTCAACACTACCTCGATGTCCCTGGGCCCGTACCATCCGGCGAACCTGAATGGACATTTATCATCTGACCATCACCACTATAACACGTATAACACGAAAGATAGCGGGCATTACAGTGAAAGAaacgtgaattcaaaaagctcGGCTGACTGTCCGGCAAACACTCATGCAAAATGCACCAGCGATATGAAAGGGCAGGAAACTAAAGAGACTAAGCTAAGGAGCGCCTTTGCGGTCGTGAGGCAGAGTCCGCCGCGCGTTGCCAATTTCCAACATCATCAGAATTGGCAACATCTCGCCGTTCAGtgttag
Protein Sequence
MQAMQGSAYPLEEFRPFEPRDIGSSSQGTLPFGVCACVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPTEGIDAATENHSGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGAPRSPPASMPFNSYSGQLAVSVQDTAASQWTEEEYARSGGSVSPRYCSAASTPHAASYPHPQHYPAPPTSLFNTTSMSLGPYHPANLNGHLSSDHHHYNTYNTKDSGHYSERNVNSKSSADCPANTHAKCTSDMKGQETKETKLRSAFAVVRQSPPRVANFQHHQNWQHLAVQC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00036409;
90% Identity
iTF_00176893;
80% Identity
-