Basic Information

Gene Symbol
pnr
Assembly
GCA_951802165.1
Location
OX637700.1:29668234-29670019[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.3e-16 6.9e-13 49.2 4.3 1 35 312 345 312 346 0.98

Sequence Information

Coding Sequence
ATGTATGGAATACATTCAGAGGACCACTACAACTTTGATAAAGTCAGACAATCGAGCAGCATCTTAGAAACGATGGTGAACACATTCAGGGTAGCGCATAGTAGTAGTTTAGAGACAAACAGTATTAAAAAAGAAGTAGAACTGGATCTTAGGCGGGAGAAGGACACTGAATCAAACAATCTTCAGGAATCTCTCTTGAAGATCAGGGCGGAGAATTCAATAAGATATGGAAATGTAGGATCGCCAAAAGAGGCTTTAGATTACAGAAACAGCGTTGTGAGGCCAATGGACCAGGAAAGTGATCAACCGGCCGATTTGTCTAAAAAGGCTGAAAACGTTACTTGTATGCCCGAAATAGAGTGTGTTAAAGAGGAAGATAACGTTTCGGAATACAGTAATAGTTCGGATCCTGAAAGGCTAGAGGTTGACATGTCACAGGCGCCGGAAGACAACTCAAATTCCACGACGCATAGTGCTCCCTCACCTCACCCTTCTGACCCACAAAAACAACAAGATGACAGGAATCTTTGGTGCGCTTTATCTCAAAATGGCTATAATCCTTCATTACCTCTAACGGGGGAAGCTAGTCAACTTCTTAAGAAGCTCATAACGTGTCGAAAACTGGGAATGAGTATAACTCCAAGCCCTTCGTTGAGCCCGAGTCAATACATCAGTGCTACCATAGACGGAAGAGGCAATATGACAGTGATGAAGGAGGGACAATCGGATCAAAGTTTGAAGACTTCATGTAGGAGAAAACAAAGTTACCCCACTAAAGCCAATGTTGAGGAGAGCAAATTCGTGCCTAGTCCACCAGGTGAAGAGAACGAGGATTATATGGATTTCACAGGTGGCAATTCTTGGTGTAATTTGTCACTTGTCAAAGGAGCCAAGGCTGGTTCTAATAACATGACTAGGAGGGTCGATTTGGCCTGTACAAATTGTGGCACACAAACAACGACAATATGGCGACGTAACCTAAAAGGCGAAATGGTTTGTAATGCCTGCGGGTTATATTACAAATTACATGGGGTAGATAGACCTCATACCATGAGAAGAGACACGATACATACGAGACGCAGAAGACCGAAGGCCAGTGAAGATCACCAAAAAGAAAGACAGAAAGCAATAATtactaaaaaaaatatgaacaatatgGAATCGAAGGAAACTGAAGATATGTTATCTGCTTTGAGGAAACAGTTGCAACCTCATCTTATGATGGCCCTTCAAGGTCATAAAACCACAAATTTTCCTCTCATTCAGGGTCCTCCGTTCCCAAACTTCTTGCCCAAAGGTGAATCCCCTGGGGGTTCAACAGCCGAGTTGGACTCGGAGGATGAAGCAATGGCTGAAGATCTGCCACTCAATTTGGTGTCAACCCAAATGGCGGATACAGAAACTCATTGA
Protein Sequence
MYGIHSEDHYNFDKVRQSSSILETMVNTFRVAHSSSLETNSIKKEVELDLRREKDTESNNLQESLLKIRAENSIRYGNVGSPKEALDYRNSVVRPMDQESDQPADLSKKAENVTCMPEIECVKEEDNVSEYSNSSDPERLEVDMSQAPEDNSNSTTHSAPSPHPSDPQKQQDDRNLWCALSQNGYNPSLPLTGEASQLLKKLITCRKLGMSITPSPSLSPSQYISATIDGRGNMTVMKEGQSDQSLKTSCRRKQSYPTKANVEESKFVPSPPGEENEDYMDFTGGNSWCNLSLVKGAKAGSNNMTRRVDLACTNCGTQTTTIWRRNLKGEMVCNACGLYYKLHGVDRPHTMRRDTIHTRRRRPKASEDHQKERQKAIITKKNMNNMESKETEDMLSALRKQLQPHLMMALQGHKTTNFPLIQGPPFPNFLPKGESPGGSTAELDSEDEAMAEDLPLNLVSTQMADTETH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00130976;
90% Identity
-
80% Identity
-