Adec026947.1
Basic Information
- Insect
- Adalia decempunctata
- Gene Symbol
- -
- Assembly
- GCA_951802165.1
- Location
- OX637700.1:22542742-22554088[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 24 0.00065 0.087 14.5 1.0 1 23 136 159 136 159 0.97 2 24 1.5 2e+02 4.0 3.4 1 21 165 185 165 188 0.90 3 24 0.0011 0.15 13.8 2.1 2 23 202 223 202 223 0.98 4 24 0.0005 0.066 14.9 0.5 1 23 265 287 265 287 0.98 5 24 4.7 6.2e+02 2.4 1.6 1 23 293 316 293 316 0.75 6 24 0.0031 0.41 12.4 3.0 1 23 328 350 328 350 0.97 7 24 7.6 1e+03 1.7 0.5 1 9 356 364 356 379 0.83 8 24 0.0027 0.35 12.6 1.8 1 23 393 415 393 415 0.98 9 24 0.0019 0.25 13.1 0.5 1 23 458 480 458 480 0.98 10 24 1.6 2.1e+02 3.8 2.2 1 23 486 508 486 508 0.96 11 24 0.02 2.6 9.9 0.3 1 23 526 549 526 549 0.97 12 24 0.0018 0.24 13.1 4.0 1 23 555 578 555 578 0.98 13 24 0.18 24 6.8 0.8 1 23 588 611 588 611 0.95 14 24 2.5 3.4e+02 3.2 2.7 1 23 628 650 628 650 0.97 15 24 0.12 15 7.4 2.3 2 23 657 678 656 678 0.97 16 24 0.16 21 7.0 1.5 1 23 701 724 701 724 0.95 17 24 0.0036 0.48 12.2 7.1 1 23 730 753 730 753 0.97 18 24 0.2 26 6.7 2.8 1 23 764 787 764 787 0.97 19 24 0.44 58 5.6 5.3 1 23 801 823 801 823 0.98 20 24 0.023 3.1 9.6 0.7 1 23 829 851 829 851 0.98 21 24 5.4 7.2e+02 2.2 1.4 2 23 859 881 858 881 0.91 22 24 5.9 7.9e+02 2.1 0.7 1 21 887 909 887 913 0.90 23 24 0.0072 0.96 11.2 0.3 1 23 940 963 940 963 0.94 24 24 0.31 41 6.1 2.2 2 23 969 991 968 991 0.94
Sequence Information
- Coding Sequence
- ATGGAAACTAAATCGGGTAGTAGTTGGGAAAATGATGACGGAACCATATCGATTGTCAAGACAGAAATAGAAGATTATGATTCGGCTGAGCTAAATGATGGAAATGAgaataatgaaattgatagcaatCAATATGATCAAAcagaaaatgaaaatgattttATCGAGCCCTCCATGCCTAAGCAAGAATATTTAGAACCTGAGGTCAATTATGCAGAAGGAGATGCTTGTTATCAAAATGCAGattatgaaaataattttcacgAAACATCTTCTAGTATGGGAGAAGCAGAAAACTGGCCCGTAATCCAAGGATACTCCATACCAGAGGCAGACGAACATTTCATGAGTCAACCCGGAACCTCAGATATAAGCGATTTTGCTTATAAGCGTGAAGCTCAGTTGTACCCTTGTAGTTACTGTGACTATGTAGGGTCACATCCAAAGTTGCTGTCGTCACATATGAACAACAAGCACATCAAAGCTGTTGTTTATCAGTGTCCTCATTGTCAGTATAGTTCTACCATTCCTCGAAGTACGAGGGAGCATATTCAATGCAAGCATCCTAACGAAGATGACGAAGTCAAGccgattataaagagaaaatgtGAGTTTTGCGATTATTGTGCAAGCAATGCAACTGCCTTGAAGAACCACATGAATAAACATACGAAAGAAAAGACACATCAATGTTCTTTTTGCGAGTTTAATACCCTATGGGAGGGATATCTAAAGATGCATATAAGGCGCAAGCATAGTGATCAATCTACTGAGTTTGGTACTGCCAAAGAGTATCCTTGTCAGTACTGCGATTATAAAGCCGCCACCCCTAGTACCCTCAAACTACACACCAATAAACACACTAGGGAGCAGGAGCACCAATGTCCTTACTGCCCTTACAAGACAGTATGGACAACCTACATCAAATTGCACATAAAGAATAAGCATTTCAAAGGCGAGAAATCTCCTCCCTCTAAAGAGCATCCTTGTAGTTTTTGTGATTACAAAGCGAAAAACTCTACTTTATTGAGGCAGCATATGAACAAACATACGCGTGAAAACGTACATCAGTGCCCGCATTGTCCTTTCAGTACCCTGTGGGTCACTTACATGAAGTTGCATATAAAACGAAAACATAGTGAAAATAACGACAATGAAGTGGCTGAGAAGAAAGATTTCCAGTGTCAATATTGTCCTTATAAAGCTATAAGTTTGAGTCATTTGAAAATACACGAGAACAAACACACAAAGGCGATTGAGTACAAGTGCGAACAGTGTGATTTCAAAACTACCTGGTATGGATATTTAAAATTTCACATCAAGAGAAAACATTCCTTGAAGGTGAAGGAAGAAGAAGAGAAGAAATCAACCTATCCATGTAATTTTTGCCCCTACAAAGCTATCAATCTGAGTACGCTGAAAGTTCATCAGAATAAACATACCAGAGAAAATATTTATAACTGCCCACACTGTGAGTTCAAAACAACTTGGAGGGCTTACATAAAAAGTCATATTCAAAAACACAATGCCAACAATTTCAAAACTAGAAAGCAGGGAGACCCATCTGTCAGATCTTACCCTTGTCAGTATTGCAGTTACGTGGCCACCCAGATGGGATCTCTGAAATTGCATGTCAACTCTAAACATACTCGAGAAAACATGCATAAGTGTCCAAAATGTGATTACCAATGTGCGGTATATGGTAACTTGAAAATGCACATCCGACGCAAACATGGTTTGAAACCGGATGAAAATGGAAAGTACCACTGTAAGGAATGTGATTTTATGTCCGAGAGTGCAGCTGAAATAAAAACTCATCTAAATGAAAAGCATGATGTTAAAATCGAAATGGATGATATCAAGAAAGAAGATGAGAAGATGTACTCATGTCAGTATTGCTCCTATACCACACTCTATCAACAGGTCATGAAGAAACATATTAACAAACATACAAGACAGAACGTAATCAAATGTCCCCACTGTCCTTATTCAACTGTTTGGAATCATTACATGAAAATCCACATTAAAAGACATAATGAACCTCAAACTTTAACTGGTAGACAGAGAAGTACTAAACCCAATACCGATCAGAGCAGACTCTTCCCTTGCCAATACTGTGACCATAGAAGCTTATCTTTCAGTAGTTTGAGAGATCACATTAATTCTGTGCATACTCGTGAGATTATCCACAAATGCCCATATTGTGACCACAAATGTACACTGAAAGGTAATCTCAAAGGACACATTAGAAGAAAACATCCTGCAGAATTCATTGAACAAGAGAAGCGATACCAATGTGAACACTGTGACTTCAAAACATCTGAAAGAAGAATTTTGAAGATTCATTTGAAGAAGGAACATAAAATAGATGATGCTAAATTGAGAGCTGAGAATGGTGAGTACAAGTGCCAGTTTTGTGAATATAAAGCCAGGAGCTTTTATACTCTGAAAATCCATCTTCATAAACATACGAAGGAGAATTCTTATCGTTGCCCTCAATGCGAATTTGCCACAAAATGGCCCAATTACCTTCGGAAGCATATAAAGCAACACAGTATCGGCAAGAGCAGGGTCTCTTGTTTATACTGTGAATATAAAGGATGCTCTACATTTAGGCTGAGGAAACACATAGAAGGTCTACATAAGGTCGATAATCATTACCCTTGTCCCAAACCTAATTGCCTCTTCAAAACTGTCCACTATACAAGTTTGAGAATGCATTTAAAAGGCAGCATACATGCTTCAGGTGTGCGTAGATCGCACATGTCTGTTAGTCGTAACTTTACGTATAAATATAATCCTAATGAAGGCAGATACTTTGCGTGCGATTTTTGCGAATATGCCTCAAAAACTCAGGGAAATTTAGATAAGCATATAATTAATAAACACGAAAAGAAGGGCATGAAATGTGGATTGTGCAGTTATAGAACGTTTTCAAAGACCTATCTTAGCAGACACTATAATCTTAGACATTCAGGTGTCCAAAAGGAAGATACAAAAACCATTAAAATACAACAAGAAGCTAATGCGATTGATTCTGAAGATACCCCCCAAAACGTCAATGATATTTGTGACGAGGGTTCCAAAGTGGATGAGGAAGAAACAGAAATCAAGGATGAAGTGATTTTCTCTTCAGATAACCATGATTCTTCTGCAAATGTAAGCAATGAATGTGGAGAAGAATCAGGCTTATTGAATCGCTCAAAAAGAAAAAGGAGTTTCATTCCTTATTATGCAGAAGAGAGTGATGATGAAGAAAATGAGCTAATTTGTGAAGACTTCCTAGAAGTAGAGCTAGGAGGGAATATTAGCAACAATGATAAAAACAAAGATGTTGAAAGTAACGAGGAACCAGCGGGtgacattgaaattattgaacccaaaattgagattgaagaatTACAGCCATTAGCAAATTCTAGTTCTTTGATTGAGGAAGAAAATATGCAGATTGAAAAAGAAGATGATAATAAAAAGAAACGAGTTTCAAATAAATTGGAACCCAAAAAACCCCCAGTGGTTAGAATTATAAATTTAAATACGACTAGACAAACAAGGAGTGGCCAACAAGCTAACATTGTTTCAGTTCCGAATAGAAGTTCCAAAAAAGTTATAACTGAAAGAACAGTAAAGAATACAAGAAGAATAAATGGAAAAAGAAGAATTATAGTAAAAAAAGTTTTGGTGAAAAACAATGTTGCAGATATAAATGAGAAAGAGCCAATCTCCAATGCTGATAACATGGTCTCGGATATTAAACAAGAACATGTTGAAGATTCTGTTAATGAAGAGATTGCTGGATTGGAGAACTGTCCACCTAATGTTGAAAACAATTTAAATTGTGCTGCTGAAAACATCAGGGTAGAACATGACGTCACTAAAAGTGAACAGTCAACTATTACTCAAATTaatgaagataaaataaatcAAGAAGATAATGCAAATCTTGAAAAACCTACAAATGAATGTGTAATCCAAATCACGAAGGAACCAGAGCAATTAATAGGAAATTCAATAGAAACTGCCGGTACGAATTCAAATAGCACTCAAGAAAAACACGTTGAAAATATCACTGAATCCCATGAGCCCATAGTCAACTGTGATCAGTCAGCTATCAGTGTCAATGAAGGCAAAATAAATCAAGAAGATAATGAGAAGCCCCAAAATTCCTCCAATGAATGTGCGACTGAAACCTCAAAAAAAGAGGAACCATTATTAAAAAACCCAGTTGTAACTCCTAGTACAAATTTAGACTCTGCTGAAGGAggaattattaatgaaatggAGAAATTCCAATGA
- Protein Sequence
- METKSGSSWENDDGTISIVKTEIEDYDSAELNDGNENNEIDSNQYDQTENENDFIEPSMPKQEYLEPEVNYAEGDACYQNADYENNFHETSSSMGEAENWPVIQGYSIPEADEHFMSQPGTSDISDFAYKREAQLYPCSYCDYVGSHPKLLSSHMNNKHIKAVVYQCPHCQYSSTIPRSTREHIQCKHPNEDDEVKPIIKRKCEFCDYCASNATALKNHMNKHTKEKTHQCSFCEFNTLWEGYLKMHIRRKHSDQSTEFGTAKEYPCQYCDYKAATPSTLKLHTNKHTREQEHQCPYCPYKTVWTTYIKLHIKNKHFKGEKSPPSKEHPCSFCDYKAKNSTLLRQHMNKHTRENVHQCPHCPFSTLWVTYMKLHIKRKHSENNDNEVAEKKDFQCQYCPYKAISLSHLKIHENKHTKAIEYKCEQCDFKTTWYGYLKFHIKRKHSLKVKEEEEKKSTYPCNFCPYKAINLSTLKVHQNKHTRENIYNCPHCEFKTTWRAYIKSHIQKHNANNFKTRKQGDPSVRSYPCQYCSYVATQMGSLKLHVNSKHTRENMHKCPKCDYQCAVYGNLKMHIRRKHGLKPDENGKYHCKECDFMSESAAEIKTHLNEKHDVKIEMDDIKKEDEKMYSCQYCSYTTLYQQVMKKHINKHTRQNVIKCPHCPYSTVWNHYMKIHIKRHNEPQTLTGRQRSTKPNTDQSRLFPCQYCDHRSLSFSSLRDHINSVHTREIIHKCPYCDHKCTLKGNLKGHIRRKHPAEFIEQEKRYQCEHCDFKTSERRILKIHLKKEHKIDDAKLRAENGEYKCQFCEYKARSFYTLKIHLHKHTKENSYRCPQCEFATKWPNYLRKHIKQHSIGKSRVSCLYCEYKGCSTFRLRKHIEGLHKVDNHYPCPKPNCLFKTVHYTSLRMHLKGSIHASGVRRSHMSVSRNFTYKYNPNEGRYFACDFCEYASKTQGNLDKHIINKHEKKGMKCGLCSYRTFSKTYLSRHYNLRHSGVQKEDTKTIKIQQEANAIDSEDTPQNVNDICDEGSKVDEEETEIKDEVIFSSDNHDSSANVSNECGEESGLLNRSKRKRSFIPYYAEESDDEENELICEDFLEVELGGNISNNDKNKDVESNEEPAGDIEIIEPKIEIEELQPLANSSSLIEEENMQIEKEDDNKKKRVSNKLEPKKPPVVRIINLNTTRQTRSGQQANIVSVPNRSSKKVITERTVKNTRRINGKRRIIVKKVLVKNNVADINEKEPISNADNMVSDIKQEHVEDSVNEEIAGLENCPPNVENNLNCAAENIRVEHDVTKSEQSTITQINEDKINQEDNANLEKPTNECVIQITKEPEQLIGNSIETAGTNSNSTQEKHVENITESHEPIVNCDQSAISVNEGKINQEDNEKPQNSSNECATETSKKEEPLLKNPVVTPSTNLDSAEGGIINEMEKFQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -