Adec036458.1
Basic Information
- Insect
- Adalia decempunctata
- Gene Symbol
- -
- Assembly
- GCA_951802165.1
- Location
- OX637704.1:246514-249498[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.001 0.13 13.9 2.9 2 23 76 98 75 99 0.95 2 11 0.011 1.5 10.6 4.6 2 23 181 203 181 203 0.91 3 11 6.7 8.9e+02 1.9 7.6 3 23 354 375 353 375 0.95 4 11 0.43 58 5.6 0.0 2 23 422 444 421 444 0.87 5 11 0.00054 0.072 14.8 1.3 2 23 498 520 497 520 0.96 6 11 0.0087 1.2 11.0 0.1 2 23 550 572 549 572 0.93 7 11 0.0088 1.2 11.0 3.6 2 23 614 636 613 636 0.96 8 11 0.092 12 7.7 3.7 2 23 650 672 649 672 0.92 9 11 0.00036 0.048 15.3 0.9 2 23 722 744 722 744 0.94 10 11 0.1 14 7.6 0.4 1 23 812 834 812 834 0.98 11 11 0.00024 0.032 15.9 0.9 1 23 845 867 845 868 0.96
Sequence Information
- Coding Sequence
- ATGACATCCGTCACGTTACCTTCAACTTCTGGTCCTATACATCAGGTCTTTTCGTCGGTGTCAGAAGGAATCACAAACAGCGAATCCGAGTTCGAAAACAATCATCCAATCAAACGGTGTCTGAGCACACCGACCTCGTTTTCCTGCAAAAAACGACGTAAACAGTCGACGCCTATTCGCATCTCAGCCACCGAATCTGAAGGTAAGAAGCAAACTGACGACTTGCAATGTACCGTGTGCCAACAACATTTCGACTATTTAGACCATCTTGAAAACCATATCGCCACTGCTCATCATTCGGTCCAAGTGAAACAGGAATCTCATGAAGAAGCACACCAGCCGCAATTCTATGATCACTACGGAAACATGCGCGACTTGAAATTCCCGAGGCCAGACTTGCAAATCATCAACGACCTTCAAAACAAAGACTGGATGGCTAGGTCTCTGAATGGCGCAAGTTCGATGTTCATGCAATTGCCACAGTTCCAGTCCGAAGGAGTTCAAGGAAGACAGCCCATCAAAATCTTCAATCCAGATGCTTACTGCGAACTGTGCAACAAGGAGTTCTGCAACAAATACTTCTTGAAAACCCACAAAGCGAACAAGCACGGTATTTATACCGAAGCCCCTTCAGAAACGTCATTTCCGACCACTGTTCCATCTTTAGTTCGATTACCCACAACAGTGCCAAGTGATCATCTCAAAACTGAACCTCATACCTCTAGCATGATCAGTGATATGTTCCAAAATCCATTTACAAATAAACCTAGATTAAGTCAATTAAACAGAATAATAACGCTGGAAGAAAAAGACACAAACGACAACCTTAATTCGAATGCATCATCGAATGGTGGAAGTGAAAAGGCCGCCGACGGACTCGATGGTGGTGAATCTTGTAGCCCGAAAACAGAAAACGAATCTACCTCATATAAAAGTGATCAGGAGGGTCTATATTACGTTCCCACTAGCAACATGTCGCCCGGACAAATCGGTTTCAACAAGGAAACCGACGTGGCGAGCCGTTTGCGAAAAATCGGCGTTATGAATCCGAAAGCTTTCTGCGAGATCTGTTGCAAAGAATACTGCAACAAATATTTTCTGAGAACTCATAAGATGAAACGACACGGTATCATGATACCGGACGAGAATAAATCGGATATGGTCCATCAGCCATTCAATTGGAATCAAATCCAAACAAGTCCTCTGAATCTCATCAAAACTGAACAGGCGAATAGCGAAAGGAAAACGACTTCGCCAGACATAAGTTGTGATATTTGCgaaatcaaatttcaaaatgctaGTTTAGCCCAACTGCACAATATCAGTGTTCACTCGAAATTATATTCCAAAGAAATAATAACAGAACCAACCGACGAGAAGATACAAGGGAATATTAGCGAACAAAACAGCGAGAATATAAGTGAAGATCTGAAAAAACTCCAGACAATGATACTTCAGTTGAACGAATTGAAAGTCGAAAAAATACCAGTGAGTTGCAACTCGTGCAACAAAGAATTCGAAAGCAGATATTTCCTTCACGCTCACATGATAACTGACCATGGTATTCTCTTGGAGGATGTCGCACCAGATAACGATAGACCGCTGGAGCAAGACAACGGTTCCAACAACAACCACCACCATCACACCATGTGCGATCTGTGCGGCAAGGATGTGGAGAATGTTGAGCAACTGAAAAAGCATCTGCTAGAAAGCCATTCGGGTTTGGAACCGTTAAATGTTAAAGAAGAAATGAGTGCAGCAGACAAATCCAGAATGTCGGTATCCAGTATGCAATTGTCCGAAAGGAGAATATCGGCAAGTTTAACACCAACGAACAGCTATTGCGAAATATGCAACAAAGAACTTTGCAACAAATATTTTATGAAAACGCACATGCAAAGGATGCATGGTATAGAAATCGAAAACGGGGCTCAAATTGGGGGAGTTGTTTGCGATATTTGCAACAAAGAACTGTGCAGCAAATACTTCTTGCGGGTGCACAAACACAATACGCACGGCATTGTCGAGTACGGAGCCAGCCTTCTACCGCATAAAAAAACAGAAGGAGAAAATGTTTCCACCTTAACGCCGGAATCGGATTCTGCTTTGAAAGCGAACGATTTAGCAGATTTGAGCCATAGATACTTTACTCATTTCACTGAAGTGTGCAAAATATGTAGCAGAAGATTCAGAAGCACCAAATGGTTGAAAGCTCATCTCTTGAATGACCATGGGCAAACTGGCGCTGAGAAATGGGCCGATATGGATCAGCAATTGTCCCAAAACATGGGACAACCTTCGAGATCTCTCAGGACGGAATGCCGAACGCTGAAAATCCCGAATAGCGGACAGGATTCGATGGCGGCATCGAAATTGTGTCTGCAGAACGTTTTGCAGAACGTATTTGGTGGCGACGAGACGGGATCCAAGATTTATCAGTGCGGCATGTGCAGTTTCACAACGACATTGCTGCCTCTGCTGTTCGTCCACGAACGTTCGCATACGACCCAAGTGACCGAAGGTCGAATGGAATTCAAATGCCCAGTCTGTGGCCAGATGTTCCTCCAAAGCGAACTGGTACAACGTCATATTCTCAAACATCATCCTTCGTTTCCGCTCCAGGGCGTTTCGAACGACGAATCCAGAGAAGCTTCCAAATCTCCAGAGGAGAGCGGCAAGGGAGAGGATTTGTCTTCAGAAGCTTCGAAGAGTGTGAAATCGAAAAATAGATGGCCCAAGTTAGAGTTGACCGCTGATGTGGAGCAGACTTTGAACGATATATCGAAGATCGCGCAAATGCCAGTGACTTACGCCCTTCCCAGAAATTCCAAAAACGATCATGTTGATTCAAAATTCGTGATGCAGCCTTTCTTGATGGAAGATGAAGCTACAGACCGAAATGTCATTCCTGCAGTAGTGTTCTTGCCGGTTTTACAGAAACAGCAAATTCCCGTAACGGTAACATTTACATTAACCCCGGCCTAA
- Protein Sequence
- MTSVTLPSTSGPIHQVFSSVSEGITNSESEFENNHPIKRCLSTPTSFSCKKRRKQSTPIRISATESEGKKQTDDLQCTVCQQHFDYLDHLENHIATAHHSVQVKQESHEEAHQPQFYDHYGNMRDLKFPRPDLQIINDLQNKDWMARSLNGASSMFMQLPQFQSEGVQGRQPIKIFNPDAYCELCNKEFCNKYFLKTHKANKHGIYTEAPSETSFPTTVPSLVRLPTTVPSDHLKTEPHTSSMISDMFQNPFTNKPRLSQLNRIITLEEKDTNDNLNSNASSNGGSEKAADGLDGGESCSPKTENESTSYKSDQEGLYYVPTSNMSPGQIGFNKETDVASRLRKIGVMNPKAFCEICCKEYCNKYFLRTHKMKRHGIMIPDENKSDMVHQPFNWNQIQTSPLNLIKTEQANSERKTTSPDISCDICEIKFQNASLAQLHNISVHSKLYSKEIITEPTDEKIQGNISEQNSENISEDLKKLQTMILQLNELKVEKIPVSCNSCNKEFESRYFLHAHMITDHGILLEDVAPDNDRPLEQDNGSNNNHHHHTMCDLCGKDVENVEQLKKHLLESHSGLEPLNVKEEMSAADKSRMSVSSMQLSERRISASLTPTNSYCEICNKELCNKYFMKTHMQRMHGIEIENGAQIGGVVCDICNKELCSKYFLRVHKHNTHGIVEYGASLLPHKKTEGENVSTLTPESDSALKANDLADLSHRYFTHFTEVCKICSRRFRSTKWLKAHLLNDHGQTGAEKWADMDQQLSQNMGQPSRSLRTECRTLKIPNSGQDSMAASKLCLQNVLQNVFGGDETGSKIYQCGMCSFTTTLLPLLFVHERSHTTQVTEGRMEFKCPVCGQMFLQSELVQRHILKHHPSFPLQGVSNDESREASKSPEESGKGEDLSSEASKSVKSKNRWPKLELTADVEQTLNDISKIAQMPVTYALPRNSKNDHVDSKFVMQPFLMEDEATDRNVIPAVVFLPVLQKQQIPVTVTFTLTPA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -