Basic Information

Insect: Adalia decempunctata
Gene Symbol: -
Assembly: GCA_951802165.1
Location: OX637695.1:21779621-21780655[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 1.3e-05 0.0018 19.8 0.6 1 23 60 82 60 82 0.97

2 9 1.2 1.6e+02 4.3 1.5 1 23 86 108 86 108 0.93

3 9 0.046 6.2 8.7 2.4 1 23 143 165 143 165 0.94

4 9 0.0057 0.75 11.6 3.7 1 23 171 194 171 194 0.96

5 9 0.00063 0.084 14.6 4.0 1 23 205 227 205 227 0.97

6 9 0.00028 0.037 15.7 0.8 3 23 234 254 233 254 0.98

7 9 6.4e-05 0.0085 17.7 1.7 1 23 260 282 260 282 0.97

8 9 8.8e-08 1.2e-05 26.7 2.5 1 23 288 310 288 310 0.99

9 9 0.0021 0.28 12.9 0.1 1 21 316 336 316 337 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	1.3e-05	0.0018	19.8	0.6	1	23	60	82	60	82	0.97
2	9	1.2	1.6e+02	4.3	1.5	1	23	86	108	86	108	0.93
3	9	0.046	6.2	8.7	2.4	1	23	143	165	143	165	0.94
4	9	0.0057	0.75	11.6	3.7	1	23	171	194	171	194	0.96
5	9	0.00063	0.084	14.6	4.0	1	23	205	227	205	227	0.97
6	9	0.00028	0.037	15.7	0.8	3	23	234	254	233	254	0.98
7	9	6.4e-05	0.0085	17.7	1.7	1	23	260	282	260	282	0.97
8	9	8.8e-08	1.2e-05	26.7	2.5	1	23	288	310	288	310	0.99
9	9	0.0021	0.28	12.9	0.1	1	21	316	336	316	337	0.95

Sequence Information

Coding Sequence: ATGGGGCAGATAAGAGTAAAAGACGAGTTCAGGATTCAGTTAGACGACGAAGATGAAAAATTCGAATGCCCAATATGCCGAAATGACGTCAAGAGGAGCCTCAAAGAGATGAAGGCGCATTACAAAGCTGACCACAAAGGAAAAAGACTGCGCACCGGTAATCTCACAAATGAATCCCATCCATGTGACATATGCGGAAGGGAACTGAAACATAAAAGCGCCCTCCGGGAGCATATAGAAATCCACAACAACAGCTACAGCTGCGAGCAATGCGGAGTGAACCATAAGAAACCAGCAGATCACGTGATACATATGAGGTCTCATTCGGATGCAGGTATCTTCGCCTGCATTTTTTGCGATTTCAACACAACCGAACTGTTGGAAATACAAAAACATATGAGCGGAGATCATGAGCGAACACAAAAATATCACTGTAAAATTTGCAATAAGGGATTTCAGATATTCAGCTGGTTCTTGGAACACGAGAATTACCATACTGGTTTGAAGCCTTTCAGTTGCGAATtctgcggaaagtgttttttgtACTCAAGGTACCTGTCAGCGCACCGGAGCAGCATGCATAAGGAGGAGCTCACAGGTGTGCCAAACATCCACGAGTGCGTCATTTGCAAAAAACAATACCAACATAAGAACAGTTTAAACCTGCATATGAACATACATACGGGCAACGTCGCGATTTGTGATATTTGCGGGAAGATTTTGTCGAGTAAGGAAAAGTTGAAGTTCCACCAGCGAACCCATACAGGCTACAAGCCTTTTAGCTGTTCGTATTGTGGGAAATGCTTCACGAAGAAACCTATTCTAGTCGAACACGTTAGGGTTCATACTGGCGAAAGACCTTACGTATGCGAATATTGCAGTAAGTGTTTCTCGCAAAGATCTAGCTTGGTGATTCATATCAGATCGCATACAGGGGAAAGGCCATACGTTTGTCAATTCTGTTCGAAAGGTTTCGTGGCCAAAGCTATGCTTAATATCCATTTGAAGTCTTGTAAGGGTATAACGATGAATTGA
Protein Sequence: MGQIRVKDEFRIQLDDEDEKFECPICRNDVKRSLKEMKAHYKADHKGKRLRTGNLTNESHPCDICGRELKHKSALREHIEIHNNSYSCEQCGVNHKKPADHVIHMRSHSDAGIFACIFCDFNTTELLEIQKHMSGDHERTQKYHCKICNKGFQIFSWFLEHENYHTGLKPFSCEFCGKCFLYSRYLSAHRSSMHKEELTGVPNIHECVICKKQYQHKNSLNLHMNIHTGNVAICDICGKILSSKEKLKFHQRTHTGYKPFSCSYCGKCFTKKPILVEHVRVHTGERPYVCEYCSKCFSQRSSLVIHIRSHTGERPYVCQFCSKGFVAKAMLNIHLKSCKGITMN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00965449; iTF_00349534;
90% Identity: iTF_00349534; iTF_00965449;
80% Identity: -