Adec036958.1
Basic Information
- Insect
- Adalia decempunctata
- Gene Symbol
- L
- Assembly
- GCA_951802165.1
- Location
- OX637704.1:9715446-9729250[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.00062 0.082 14.6 0.2 1 23 37 59 37 59 0.98 2 15 0.07 9.3 8.1 5.8 1 23 65 87 65 87 0.97 3 15 1.2e-06 0.00016 23.1 2.9 1 23 93 115 93 115 0.99 4 15 0.0003 0.04 15.6 0.2 1 23 121 143 121 143 0.98 5 15 0.046 6.1 8.7 1.1 3 23 194 215 194 215 0.97 6 15 2.5 3.4e+02 3.2 1.9 2 23 318 339 317 339 0.92 7 15 7.8 1e+03 1.7 0.0 1 23 406 429 406 429 0.90 8 15 6.1 8.1e+02 2.0 0.5 1 23 531 555 531 555 0.73 9 15 2.1e-06 0.00028 22.4 1.2 2 23 566 587 565 587 0.97 10 15 0.00034 0.045 15.4 0.3 1 23 596 618 596 618 0.98 11 15 2.5 3.3e+02 3.2 0.3 1 11 692 702 692 707 0.85 12 15 0.0012 0.16 13.7 0.3 2 23 768 789 767 789 0.94 13 15 0.0026 0.34 12.7 0.1 1 23 797 819 797 819 0.97 14 15 0.044 5.8 8.8 0.3 1 23 826 848 826 848 0.97 15 15 0.055 7.3 8.5 1.1 2 21 876 895 876 896 0.94
Sequence Information
- Coding Sequence
- ATGCTTTTCAAGGGAAACAGTACAAGACTGGCTCTTGTTATAGAAAAATTGCAGGGTAGTAAAGAAGCATTATCTCAAACGAAAGAAACCTCGAGGTTGGAAGAGCCCTATGAATGTGGAGTTTGTTACGTGAAATTCGCAAGATCGACACTCCTGGATGTGCACATGCAGAGTCATACAGACCACCTACAATTCACGTGTTCCTATTGTCCTAGATTGTTCAAGCACAAGAGATCTAGAGATAGACATACAAAGCTCCATACTGGGGATAAAAAGTATAAATGTTCGAGCTGTGACTCGGCTTTCTCAAGAAGCGACCACTTAAAGATACACATGAGGACCCATGATAGTAAAAAACCTTTCAGATGTGAAACATGCAATAGAGGATATAATTCGGCGGCAGCACTGTCGACGCATCTTCAAATTCACACAAAATTGGAAACAAGTTCTGGAAGCCGCACGAGCAGAAGTACACCAAGTCCTAGTGCAAATATGGAGAGTTTCGTCAAACAGGAATTCCCACAAGACCTTCCCACTTTCACACCCCTAGGCGGCAGTACGATGCCAGTCAAAGTGGGTTGCTACCTTTGTTCAAGAGAGTTCGCTACTCTAGAAAGATTGAATGCTCACATATGCATAAGACACCCCCACGAGGGGCGAAATGGGGGCACCCCAAATCCGTCATCCGTTGCTTCTGGTTCATCCCACATGGAAAATGGGCTGCTGAACAACAATGTCAGAGAATCTTTCTTGTATTCGGTGAGAAACGCCACTCCTCGTCCATGCACCATAACGCGACCTAGGCTTCACGAATACCACATGCAAATGGAAGCGACCGATCTGACCACGAGGATCGACAGCGCAACGGGGGCGACCATCATGAAACGAAGACGAATGGAGCCCGAAATCATTGCGAACCCTTATGGTAGGCATGCTCATCTACAAACCTGTATTTGTCCAAGTTGTGGTTCTCCACATCCAAACTTTCGTAGTTTCATCCGTCACATGGAAACTCATATAACAAGACTTAACAACCATTTAATCGTTTGTCCAGCATGTGGAGAAACCAGCGATACTGTTGAGGCGTATACCACCCATTGTTTTGACCATTACATCGTTCAATCTTCCGGTTTTTGCTGTACCATCTGTAGAATTCTCTTTCGAAGTGAGGAGGAGAGTGTCAACCACTACCAAGACACGCACGTTATATCTTTGTTCAGGTGTATCGTTTGCGGCGACGTCTTGGAGAACAGTGTGGCCCTCCAGGTACATTACGGAAGGAATCATAAGGCATATTGCAGTCACTCGGCTTGCAAACTCTGTCCAAATTTGGTGTTTCAGGACAGAATTGCTGCTCAATTCCACATTTCTATGGTTcacttcaaacagtgcttcagGACCCAGAACACAAACGACCAGGACCAGAGCTACTCATCCGAAAATAACATGTACCACCAATCTCCTCAAGCGTTGCCTGCTCCATCGCTAACTCCTCAGCCTTTACCCCAACCGTCGTCAATATCTTCCAGTATGCTCTTTGGGAATTTAGATACATCGGAAGGCACATATCAAAGGACCCCTCCGAAAACTTTCACTTGTGATATTTGCAACCTTACAGACATTTCTTCAGAGGCCGAGTTGCATTCACATAAGAAACTCCAGCACTCAAAATCCAAAGTCAGATCTTTGAGTTTGCAATGTGCCTACTGTAAGGAAACGTTCAAATCAAGAAGCGAACTGGAGAATCACATGAAAAATCACCAGGTAGTATACGGAAAAGGAAAACACAAATGCAACATTTGCGATGCAATATTTCCTTCATCTGTAACATTGGCGGATCATAAACTAACACATTGCAAGATAATTGAAGGTAGCATATGCGTCCAATGTAAAGGAGCTCTGAAAGATGAACAGTCTTTCTACGACCATCAACTTCTTCACGCAACCAGTCCTTCCAAAACAAGTTCCCAAATAGGATTTCCAGCAAACTGTGTGATTTGCTGCCAAACATTACAGAACACCATTGAGTTGAATAACCACGCAACTTTTCATCTGAAACATCTGTTAAGAAGACATATTTGCACTGTCTGTAATGAAACCTTCGATGCTCCAGCTAATCAGAATGGTGAACAGAAAAAGGAAATATTCAACCATTTGTTAACGATCTGCAATAAATGCTCAACAGAAGAGGATCCGAGAATGGTTGCTATAAGAGATTCGGAAACTGattctgaagaaaaaatgaCTAGGTACAGTTACGAAAATGGCCAGAACATATCTGAAAACGAAAAGAACAATTTAGAATGTCGGTCGTGTAAGCAGGTATTTTCTTCTCCTGGAAAACTGCAAACGCATTTGATTGAGCACAATTTTGTTGGGATGAATCAATACAGTTGTTATATTTGCTCTTCTGTTTTTACTGGTGCTGATGGTTTGAGGAATCATATATTAGGTCATGGATTCCAAAGCAAGCCATACGAATGTCCTTTCtgtgaattgaaatatttcttcCGAACTGAGCTTGATAACCATATCGTTATACACGATCCTGCATCAAATTCCATTAACAATTTTTCTTTAGACAGAAAATGTCTAGCAGATATCAAAGAAGCCAATAAGTATGAAACTTGTGTCTATTGTCACAACgtattttccaaaaattcattCTTCATAGAACACTTGAAAAATTGTTCGGTAAGGATAAAGATGAGCAATGCAGATATAGACAATAAAATCAAACAAGAAAACATTGATTCTGCAGATTTCAGCAACAACCAATAA
- Protein Sequence
- MLFKGNSTRLALVIEKLQGSKEALSQTKETSRLEEPYECGVCYVKFARSTLLDVHMQSHTDHLQFTCSYCPRLFKHKRSRDRHTKLHTGDKKYKCSSCDSAFSRSDHLKIHMRTHDSKKPFRCETCNRGYNSAAALSTHLQIHTKLETSSGSRTSRSTPSPSANMESFVKQEFPQDLPTFTPLGGSTMPVKVGCYLCSREFATLERLNAHICIRHPHEGRNGGTPNPSSVASGSSHMENGLLNNNVRESFLYSVRNATPRPCTITRPRLHEYHMQMEATDLTTRIDSATGATIMKRRRMEPEIIANPYGRHAHLQTCICPSCGSPHPNFRSFIRHMETHITRLNNHLIVCPACGETSDTVEAYTTHCFDHYIVQSSGFCCTICRILFRSEEESVNHYQDTHVISLFRCIVCGDVLENSVALQVHYGRNHKAYCSHSACKLCPNLVFQDRIAAQFHISMVHFKQCFRTQNTNDQDQSYSSENNMYHQSPQALPAPSLTPQPLPQPSSISSSMLFGNLDTSEGTYQRTPPKTFTCDICNLTDISSEAELHSHKKLQHSKSKVRSLSLQCAYCKETFKSRSELENHMKNHQVVYGKGKHKCNICDAIFPSSVTLADHKLTHCKIIEGSICVQCKGALKDEQSFYDHQLLHATSPSKTSSQIGFPANCVICCQTLQNTIELNNHATFHLKHLLRRHICTVCNETFDAPANQNGEQKKEIFNHLLTICNKCSTEEDPRMVAIRDSETDSEEKMTRYSYENGQNISENEKNNLECRSCKQVFSSPGKLQTHLIEHNFVGMNQYSCYICSSVFTGADGLRNHILGHGFQSKPYECPFCELKYFFRTELDNHIVIHDPASNSINNFSLDRKCLADIKEANKYETCVYCHNVFSKNSFFIEHLKNCSVRIKMSNADIDNKIKQENIDSADFSNNQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00765070; iTF_00130814;
- 90% Identity
- -
- 80% Identity
- -