Adec029718.1
Basic Information
- Insect
- Adalia decempunctata
- Gene Symbol
- -
- Assembly
- GCA_951802165.1
- Location
- OX637701.1:25704373-25718744[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.00013 0.018 16.7 0.9 1 23 104 126 104 126 0.98 2 12 0.00016 0.022 16.4 1.2 1 23 132 154 132 154 0.97 3 12 0.019 2.6 9.9 1.1 2 21 181 200 181 201 0.94 4 12 1.6e-05 0.0021 19.6 3.7 1 23 210 232 210 232 0.99 5 12 0.00015 0.021 16.5 5.1 1 23 237 259 237 259 0.98 6 12 0.18 24 6.8 0.1 2 14 285 297 285 299 0.84 7 12 0.0029 0.38 12.5 2.9 1 23 320 342 320 342 0.96 8 12 2.3 3e+02 3.4 2.2 1 13 373 385 373 386 0.86 9 12 0.00042 0.056 15.1 2.5 1 23 499 521 499 521 0.97 10 12 0.005 0.66 11.7 0.2 2 20 576 594 576 596 0.94 11 12 4.8e-06 0.00064 21.2 1.2 1 23 605 627 605 627 0.99 12 12 3.5e-05 0.0047 18.5 1.1 3 21 635 653 633 654 0.93
Sequence Information
- Coding Sequence
- ATGGTTCTTAAGGAAATGGATCTTGCTGGGATCCTTGAAAACAGTAACAAAGATGCCTTGTCTACAGTAGAATCAGTACAGTCAtattatgaaaattttcttgAAGTGGTGGAAATTGGGTCTTCCAACGAAGAGACACATCTAGAATATGAATCAACTGATGATGGACATAGTGAGGTACAGTTAAATTCAAATGGAAATCGTATCCTTGAAGCATGCCACAAATGTGAATGTTGTGGGGCACACTTTGTTGCCCATAACCTACTATGGGATcatttgaaacaaaataaaacTTGTATGGAAAAACGATTCAAATGTCCTACATGTTCAAAAACATTCTCCATAGGGTACAGATTGAAAGCTCATATGGAAAGCCATATAGAAGAACCCCGTTTCCAATGCAACATTTGTTCTAAAGCATTAAAATCTTCACGCTCTCTTTTGAGGCATAAAACCATACATGAAGTGGAGGAAACAACTGATGATATAACACAAAGGGAAACTCAGGTGAATGAGAAGTGTTTATGCAAAAAATATCCAAGATGCAACCATTGCAGTGAAAAATTCAGAGGTTTGAAGGAACTGATGGAACATtataatcaaaatgaaaattgttgGAAGAATCGGTTCAAGTGCCCTTTATGTTCGAAAGCATTTTGCCAAAGACAAAGGTTGAAAAAGCATATTATAACCCACAGAGAAGGTCCTTTCCAATGCAATACTTGTTCTAAATTGTTCAAATTCTCACATAATCTTTTGAAGCATCAAAACATACATAAAGAGGAGGAAATTGAGAGAATGGCAGAGAATGAAACACATGTAAATGAGAAGTGTCCTTTAAGAAAACCTCCTGAATGCACATATTGTGGAGAAAAATTCTATCAAAATATTCTTTTAGGATTTTACGGAGAAGCAGCATTGGATGCCCATTTACAAACTCATACAGATGGGTCCGTTTTCACCTGTAAATACTGCGGACGAAATTTCGCAACATACCAGAGTCACAGAAGGCATATTATTGGACATGAAGCGCCGGAAAGATTGAAGCATAAAGTTTCCCGGCCTAAAGGATTAGAGCAAGCCCGGCCTAAAGGATTAGAGCAAGGAGTGCCTGAATTTCTTTGTCACCTTTGTGGAAAACAATGCAAGTCAAAAAATATATTGAATTTCAAAGAGAAATGCAGAACAGCTGACTCAATTTTGCGACAAGCTCTTGAGAAAAAAGATCTTGATGAAATCAGTCCCAAAAATACCCTGTTTGCAGATAAAACAATAAATTCAACTCATGAAAATGTTCTTGAAGTGGTAGAAATTGTGGACTCGGATGAAGAAACACAACAAGAAGATGAAATAACTGAGATTAAGCAAAATGAAATTCCatcaaataaagagaattcaatAGAAAAATGCTGTAAATGTTGTGGTGAAAAATTTTATGGGGCAAAGAAACTCAGGGAGCATTTCATCCAAAATAAAACTTGTATGAAGAATCGATTCTATTGCCATGTGTGTTCAAAGAGTTTCTCTGGAAGATATAGATGGAAAGCTCATATGGGAAGCCATTCAAAGGAATCCCCTTCACGAAATAATATTCGTGCTAAAACATTAAAAGTTACTCGAAATCTTTTGAGGCCCCAGAACATACATAAAAAGAAGGAAAAAACTGATGATATTTCAAATAATGAAATTCAGTTAAACTCAAGGTGTTCTGTGGAAGAATATGAAGAATGCAACTATTGCGGTGAAAAATTCATGAAGATAAAAGAACTAATGAGACATTATGATCAAAAAGAAATTTGTTTGAAGAATCGATACAAATGCCCCTTATGTTCAAAAGCATTCCCTAGAAGATTTAAGGTGAAAATACATATGAGGAGTCACATCGAAGGAAAACCTGTCAACTGTGAGATTTGTTCTAAAGCTTTCAGACATGAAAGCCATCTTAGAAGACATGCAAAGCTTTTCGTAGAGCTGATGCACACAGAGATCATCTACGAATTCATGCAGATGAAATCTCTTTTACCTGTGAATATTGTGGAAAGGGTTTCAGAACATACGCCTGTTACAGAGGTCATATTATGA
- Protein Sequence
- MVLKEMDLAGILENSNKDALSTVESVQSYYENFLEVVEIGSSNEETHLEYESTDDGHSEVQLNSNGNRILEACHKCECCGAHFVAHNLLWDHLKQNKTCMEKRFKCPTCSKTFSIGYRLKAHMESHIEEPRFQCNICSKALKSSRSLLRHKTIHEVEETTDDITQRETQVNEKCLCKKYPRCNHCSEKFRGLKELMEHYNQNENCWKNRFKCPLCSKAFCQRQRLKKHIITHREGPFQCNTCSKLFKFSHNLLKHQNIHKEEEIERMAENETHVNEKCPLRKPPECTYCGEKFYQNILLGFYGEAALDAHLQTHTDGSVFTCKYCGRNFATYQSHRRHIIGHEAPERLKHKVSRPKGLEQARPKGLEQGVPEFLCHLCGKQCKSKNILNFKEKCRTADSILRQALEKKDLDEISPKNTLFADKTINSTHENVLEVVEIVDSDEETQQEDEITEIKQNEIPSNKENSIEKCCKCCGEKFYGAKKLREHFIQNKTCMKNRFYCHVCSKSFSGRYRWKAHMGSHSKESPSRNNIRAKTLKVTRNLLRPQNIHKKKEKTDDISNNEIQLNSRCSVEEYEECNYCGEKFMKIKELMRHYDQKEICLKNRYKCPLCSKAFPRRFKVKIHMRSHIEGKPVNCEICSKAFRHESHLRRHAKLFVELMHTEIIYEFMQMKSLLPVNIVERVSEHTPVTEVIL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -