Adec034367.1
Basic Information
- Insect
- Adalia decempunctata
- Gene Symbol
- -
- Assembly
- GCA_951802165.1
- Location
- OX637703.1:9922760-9927509[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 0.12 16 7.4 1.1 2 23 138 160 138 160 0.92 2 20 0.00095 0.13 14.0 4.6 1 23 166 189 166 189 0.93 3 20 0.0085 1.1 11.0 4.3 1 23 195 218 195 218 0.94 4 20 0.0026 0.35 12.6 1.6 1 23 281 304 281 304 0.92 5 20 0.00049 0.066 14.9 1.2 1 23 318 341 318 341 0.92 6 20 0.0021 0.28 12.9 3.4 1 22 347 368 347 368 0.95 7 20 0.013 1.8 10.4 3.2 1 23 496 519 496 519 0.97 8 20 0.98 1.3e+02 4.5 1.0 2 23 526 548 526 548 0.92 9 20 0.003 0.4 12.4 1.5 1 23 555 578 555 578 0.97 10 20 0.0047 0.63 11.8 0.8 2 23 585 607 584 607 0.95 11 20 4.2 5.6e+02 2.5 4.2 1 23 613 636 613 636 0.95 12 20 0.63 83 5.1 3.5 1 23 642 665 642 665 0.96 13 20 0.006 0.8 11.5 0.4 1 23 671 694 671 694 0.95 14 20 2.3 3.1e+02 3.3 2.6 1 23 701 724 701 724 0.93 15 20 0.0021 0.28 12.9 3.3 1 23 730 753 730 753 0.95 16 20 0.3 39 6.2 4.5 1 23 759 782 759 782 0.96 17 20 0.065 8.6 8.2 0.3 2 23 785 807 784 807 0.92 18 20 3.3e-07 4.4e-05 24.9 0.3 1 23 813 836 813 836 0.94 19 20 0.00099 0.13 13.9 3.0 1 23 842 865 842 865 0.95 20 20 6.2e-05 0.0082 17.7 0.3 1 23 871 894 871 894 0.95
Sequence Information
- Coding Sequence
- ATGGAAGACCTCATGCCATATGGTAAAGATgtaaaaaacgaaatttttataGAAGAAGTAAACTTTACGCATCAGATTTTTGGAGAAATAACAGCTTTAGATCTCATAAACCCTGTAGACGTCAACTCTGGTCAATCTGGAGAAATCCTGAATGGAAAAATAAACAAGAGAGTATTTTTCATCCCAAACTCAAACACTGATTCTTTGGCAGTACCAAACACGAAAGGCATCAACGAACAAGAACGAAATTACCAACTTTCTTGTCATCTATGCGAATACTCTGCATTTCGAAAAGCTTATCGCCAACCTATTATGGACCTCGCTGTCTCTAGTATACCAAATTTGAAATTCATCGATAAAAAAAAGGTTAAAGAACATATTACGAATGCTCACCCCAATTTCAAGATGAGAAAATGTCACTTTTGCGAATACGAAACGATGTACAAGAGCAGCCTCGATAGACACATCGATGGTATCCACTTAAACCTGCGGAACCATAAGTGCCATTTGTGTGACTTCAGTTCTACCCGAAAATACGATCTTAAGAGGCATGTGGATAATGTCCATCTTAATTTGAGGATACACAGGTGTCCATTGTGTAAATTCAGTTCCAATCGTAAGCATGGGCTTAAAAAACACttggaaaatattcatttgtactCGTGGAACGAGGCAAAGTTAGAACATCAGTTAGATTTCGCTGGGTTAAACAGTCAACGTGAAAAGTTGCTGAATGAGGTCATGGAAGACATCGAATTGAGAACCTCTATCagtaaaattttgaaacaagATGTTACAGAAGCCCCACTTGAAGAAGGATCTCATTCCCATATGaaaaactacaagtgccatTTGTGTGAATACGTTTCAAATAGAGAAAGCAATGTGGAAAGACATATATTTTTCGTCCATTTGAAATCCAAGACACCTAAGATATCAACTAAGCCTTTACACGAATGTAACTTCTGCGATTTCAGCACCAAAGATAAAGCCAGTTTGAGAAAGCACATTGATGGGATACATTTGAACTTGAGGAACCACAAGTGTCATCTATGTGACTACACCTCTAATCAGAGCGGAACGCTCAAAAATCATCAAAAAAGAGGATTGAAAGATCTGAATGAACAAAGTCAAGGTATTGCAGACAATATGGCATTGGAAAATCTAAAAAAGGAAGTGGTTCAAGATGAACAAAACCATGTAGAAGAAGATACAAATAAAATATGTATGAAGGTGGAAGAATCTAATGAAGAATTCAGTTCAGAAGAAATATCCTCAAACAAACAGGTTAAAAGCGACCCATCTCTTGACAGTATCGAAATCTCTGATATTATGTTAATGGATCAAAATGATTCCATTAAAACAGAGGAGATGTTACCCACTAATGAATCCATCAATATCAGCAATGATGAATCATTGGCGTTACCAACCCCACAAGATAACAAATCAAAACGATTCTCACGGAATCTGCAGTTAGagaaaaatttcaagtgtgatCAATGCACCTTCGCAACCAATCACAGATTTTCGTTGAAAACgcatattgaaagaattcactTGAATCTCAGATTGGAAAAATGCCACTTATGTGACTTCAAACCAAATGGAAAGGAGGGTCTCAAAAAGCATATGGACGAGGTCCATCCAGATTCCAAAAAGCATTATGCTTGCAAATCATGTGACTTTAGTTCAGTTTTAAAGCACGATCTCACAAAGCATATCAACACTGTCCACTTAAAACTGAAGAGTGTCCAGTGTCACTTATGTGACTATAGCACCATTCGTAACTCCATTCTGAAAAAACACATAGATAGTGTCCATTTAAACCTCAGAGAACATCACTGTGACATGTGTGATTTCAGTGCGCATAGTAAATCAATTTTAAAGCAACATATAGAGCGTATCCATTTAAATTTGAAAGCACACAAGTGTCCATTGTGTGAATTCAcctgtaatattaaaaatggtATAAAGAAACACATACAAAACATGCATTCCAACCCAGAAGAGTACAAGTGCCAGTTATGTGACTATAAAGGCAATGGCAAAAAAGGCCTCAAAAGGCATATAGAGGAAGTTCATCCAGAAACTAAGAAGAAGCACAAGTGTACATTTTGTAATTATACCGCATTCCTAAAGAATGATATGACAAAGCACGTCGACAGtgtccatttgaaattgaagaccCATAAATGTCACTTATGTGACTACAACTCAAGTACCAGCTTCGGGTTGCGgaaacacatacagggtgttcatttgAAAGTCCGAAATCACAAATGTCTCCTTTGTGATTTTACAGCAAACTTAAAGACTTGCTTGCGAAGACATATGAATAATGTTCACCTGAACAAGTGTAAAATGTGTTTATTGGAttttaattcaaaaattgaacttAGAGAACACTTGGATGCGTTACATCCAGACTTCAAGAAATATAAGTGTGACAAATGCGATACCAGTTTTGCTCGCAAAAGCGATTTGGAGAAACACATTGAAGGGGTTCACTTGAATTTGAGAGTTCATCGCTGTAGCTATTGTGGGTACAGTTCAAATCGGAAGGTTTGTTTGCAAGATCATATCAATGCTATTCAtctgaaattgaagaaatatgaGTGTACATTCTGTGATTATGTTACAAATCGTAATGATGCTCTTAAGAGACATATTGGTAGGATACATTCCAGTGCTAAGAAAAATTAG
- Protein Sequence
- MEDLMPYGKDVKNEIFIEEVNFTHQIFGEITALDLINPVDVNSGQSGEILNGKINKRVFFIPNSNTDSLAVPNTKGINEQERNYQLSCHLCEYSAFRKAYRQPIMDLAVSSIPNLKFIDKKKVKEHITNAHPNFKMRKCHFCEYETMYKSSLDRHIDGIHLNLRNHKCHLCDFSSTRKYDLKRHVDNVHLNLRIHRCPLCKFSSNRKHGLKKHLENIHLYSWNEAKLEHQLDFAGLNSQREKLLNEVMEDIELRTSISKILKQDVTEAPLEEGSHSHMKNYKCHLCEYVSNRESNVERHIFFVHLKSKTPKISTKPLHECNFCDFSTKDKASLRKHIDGIHLNLRNHKCHLCDYTSNQSGTLKNHQKRGLKDLNEQSQGIADNMALENLKKEVVQDEQNHVEEDTNKICMKVEESNEEFSSEEISSNKQVKSDPSLDSIEISDIMLMDQNDSIKTEEMLPTNESINISNDESLALPTPQDNKSKRFSRNLQLEKNFKCDQCTFATNHRFSLKTHIERIHLNLRLEKCHLCDFKPNGKEGLKKHMDEVHPDSKKHYACKSCDFSSVLKHDLTKHINTVHLKLKSVQCHLCDYSTIRNSILKKHIDSVHLNLREHHCDMCDFSAHSKSILKQHIERIHLNLKAHKCPLCEFTCNIKNGIKKHIQNMHSNPEEYKCQLCDYKGNGKKGLKRHIEEVHPETKKKHKCTFCNYTAFLKNDMTKHVDSVHLKLKTHKCHLCDYNSSTSFGLRKHIQGVHLKVRNHKCLLCDFTANLKTCLRRHMNNVHLNKCKMCLLDFNSKIELREHLDALHPDFKKYKCDKCDTSFARKSDLEKHIEGVHLNLRVHRCSYCGYSSNRKVCLQDHINAIHLKLKKYECTFCDYVTNRNDALKRHIGRIHSSAKKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -