Basic Information

Insect: Adalia decempunctata
Gene Symbol: -
Assembly: GCA_951802165.1
Location: OX637703.1:625922-638404[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00075 0.1 14.3 4.0 1 23 64 87 64 87 0.94

2 16 0.0013 0.18 13.6 0.0 1 23 93 116 93 116 0.95

3 16 0.0011 0.15 13.8 2.2 1 23 122 145 122 145 0.95

4 16 0.0097 1.3 10.8 3.6 1 23 151 174 151 174 0.95

5 16 0.46 62 5.5 4.4 1 23 180 203 180 203 0.97

6 16 0.017 2.3 10.1 2.8 1 23 209 232 209 232 0.96

7 16 0.0014 0.19 13.5 2.3 1 23 238 261 238 261 0.97

8 16 0.00083 0.11 14.2 0.5 1 23 335 358 335 358 0.95

9 16 2.1 2.8e+02 3.5 2.9 1 23 364 387 364 387 0.91

10 16 0.00056 0.074 14.7 0.8 1 23 393 416 393 416 0.93

11 16 0.22 29 6.6 1.4 1 20 422 441 422 445 0.94

12 16 0.016 2.1 10.2 0.6 1 23 451 474 451 474 0.90

13 16 0.0076 1 11.2 3.1 1 23 480 503 480 503 0.97

14 16 0.00081 0.11 14.2 0.8 1 23 509 532 509 532 0.95

15 16 0.00015 0.02 16.5 0.4 1 23 538 561 538 561 0.97

16 16 0.00028 0.037 15.7 3.5 1 23 567 590 567 590 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00075	0.1	14.3	4.0	1	23	64	87	64	87	0.94
2	16	0.0013	0.18	13.6	0.0	1	23	93	116	93	116	0.95
3	16	0.0011	0.15	13.8	2.2	1	23	122	145	122	145	0.95
4	16	0.0097	1.3	10.8	3.6	1	23	151	174	151	174	0.95
5	16	0.46	62	5.5	4.4	1	23	180	203	180	203	0.97
6	16	0.017	2.3	10.1	2.8	1	23	209	232	209	232	0.96
7	16	0.0014	0.19	13.5	2.3	1	23	238	261	238	261	0.97
8	16	0.00083	0.11	14.2	0.5	1	23	335	358	335	358	0.95
9	16	2.1	2.8e+02	3.5	2.9	1	23	364	387	364	387	0.91
10	16	0.00056	0.074	14.7	0.8	1	23	393	416	393	416	0.93
11	16	0.22	29	6.6	1.4	1	20	422	441	422	445	0.94
12	16	0.016	2.1	10.2	0.6	1	23	451	474	451	474	0.90
13	16	0.0076	1	11.2	3.1	1	23	480	503	480	503	0.97
14	16	0.00081	0.11	14.2	0.8	1	23	509	532	509	532	0.95
15	16	0.00015	0.02	16.5	0.4	1	23	538	561	538	561	0.97
16	16	0.00028	0.037	15.7	3.5	1	23	567	590	567	590	0.97

Sequence Information

Coding Sequence: ATGGACGAgtacaaaataaaaaagaatgaatTAGAAGATGTAGATAGACCTGAGGAATTTATTgttaataatgatatatctaaaGGAGAAGATTGTGAAGATACTCTTAATACCACCGTCAAATCTGATTGTACGATCGACCGTAGGACAGAAACACGAGACGTGGATTCTCCTGCCATTCTCAAACCTCACAAATGTACCCTCTGTGATTATTCAACAAATAACAAAACCCATCTCAAGACTCACGTAAACGCCGTTCATTTGAACCTGAAGCAATATCAATGCACCCTCTGCGACTACGCAGCAGGAAGACAAGGAAATCTTAAGATCCACGTGGATTCCGTTCATTTAAACTTGAAACCATTCAAGTGCCATCAATGTGACTACGCCGCCAATCGCGAAGGGCATCTTAAGAACCATACCAATgcggttcatttaaaattgaaacagTTCAAGTGCGATCACTGCGATTACGCTACGAATATGAAATGTAACCTTAATCTTCACGTGACTTCCATTCATTCAAATCTGAAGGAGTTTAAGTGTCATCTTTGCGATTACGCTGGGACTTGCAGGGGTAAACTTAAGATGCACATCAATTCcttccatttgaaattgaaaccgtTCAAGTGCGAACACTGTGATTATTCTTCGAATCGTTTACATGTTGTTACGATGCATATGAAGGCTGTTCATTCGAAATCGAAGAGATACCAGTGCGATCAATGTGATCATGCTACCAATTATAAGAACGCTTTGAAAAGTCACATAAATTACAAGCATTTAAACTTGAAACCGTACAAaatggACGAGTACGAAATTGTAAAGAAAGATGTAGAAGATGTGAATTTATCCAACGAGTATATGgttggaaatgaaataattaaaaGAGAAGATTATGAAGAGAATCTTTATTCTACTGTGAAATCTGATGTTGATGATTGTAACATGGAAAGGGGGACAGAAATAGGAGATGAAGATATTCCTTCGATCTTGAAGCCTCACAAATGTGATCAATGTGATTATGCTACAAATAATGAAAGTAATCTCGTCCTCCATGTAAGTTCTGTTCATTCGAAATCGAAGCAATTCCAGTGTCCCTTTTGTGATTTCGTCTCAAACTGTAAAGGACACGCAAAAAGACATGTAGATTCCGTACATTTGCAGTTGAAGCCGTACAAGTGCGATAAATGTGATTACGCTACAAATGCAAAAGCTCATCTGAAAAGACACGTCAGTGCTATACATTTAAATTTGAAACGATTCAAGTGCGATCAGTGTGATTTTGCTTCAAATCTCAAAGAAGACCTGGAGATTCATAAAAATTGTGCTCATTTAAATTCGAAACCATTCAATTGTGATCGATGCGATTATGTTACGAACCGTATCGGTCATCTTAAGGATCATACCGATgccgttcatttgaaattgaaacagttCAAGTGCGATCACTGCGATTACGCTACGAATATAAAATGTAACCTCAATCTTCACGTGAATtccgttcatttaaaattgaggCAGTTCCAGTGTCATCATTGCGATTATGCAGCACCAGGGAACTCAGCTCTCAAAAAACACGTCGATTCTgtacatttgaatttgaaacgaTTCGAGTGTgatcaatgtgattattctgcgaATCGTAAAGGGAATCTTGAGACGCAtaaaaattctgttcatttaaaattgaagccgCACCAGTGTCATCTTTGTGATTACTCTACAACCGGGAGCAACACGCTCAGGAGGCATATAAATTCTGTACATTTGAAACAATATAAGTCTGATCAATGTGATTTTGATGCAAAATCAAATGACTGA
Protein Sequence: MDEYKIKKNELEDVDRPEEFIVNNDISKGEDCEDTLNTTVKSDCTIDRRTETRDVDSPAILKPHKCTLCDYSTNNKTHLKTHVNAVHLNLKQYQCTLCDYAAGRQGNLKIHVDSVHLNLKPFKCHQCDYAANREGHLKNHTNAVHLKLKQFKCDHCDYATNMKCNLNLHVTSIHSNLKEFKCHLCDYAGTCRGKLKMHINSFHLKLKPFKCEHCDYSSNRLHVVTMHMKAVHSKSKRYQCDQCDHATNYKNALKSHINYKHLNLKPYKMDEYEIVKKDVEDVNLSNEYMVGNEIIKREDYEENLYSTVKSDVDDCNMERGTEIGDEDIPSILKPHKCDQCDYATNNESNLVLHVSSVHSKSKQFQCPFCDFVSNCKGHAKRHVDSVHLQLKPYKCDKCDYATNAKAHLKRHVSAIHLNLKRFKCDQCDFASNLKEDLEIHKNCAHLNSKPFNCDRCDYVTNRIGHLKDHTDAVHLKLKQFKCDHCDYATNIKCNLNLHVNSVHLKLRQFQCHHCDYAAPGNSALKKHVDSVHLNLKRFECDQCDYSANRKGNLETHKNSVHLKLKPHQCHLCDYSTTGSNTLRRHINSVHLKQYKSDQCDFDAKSND

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -