Basic Information

Insect: Adalia decempunctata
Gene Symbol: -
Assembly: GCA_951802165.1
Location: OX637697.1:25755083-25757708[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 1.8 2.5e+02 3.7 1.5 1 23 71 93 71 93 0.86

2 15 1.9 2.5e+02 3.6 1.6 2 23 99 120 98 120 0.94

3 15 9.1e-06 0.0012 20.4 1.4 1 23 132 154 132 154 0.96

4 15 0.0016 0.22 13.3 0.7 3 23 159 180 158 180 0.93

5 15 0.0032 0.42 12.4 4.1 1 23 189 211 189 211 0.97

6 15 0.00045 0.06 15.0 0.3 1 23 216 238 216 238 0.97

7 15 0.048 6.4 8.6 4.6 1 23 244 266 244 266 0.97

8 15 0.11 15 7.5 1.7 1 23 269 292 269 292 0.96

9 15 4.3e-05 0.0057 18.2 2.1 1 23 301 323 301 323 0.98

10 15 0.0018 0.24 13.1 0.9 2 22 331 351 330 354 0.87

11 15 0.004 0.53 12.0 0.5 1 23 364 387 364 387 0.96

12 15 0.0045 0.59 11.9 2.2 3 23 396 416 394 416 0.96

13 15 0.00058 0.078 14.7 0.5 1 23 423 446 423 446 0.94

14 15 2e-07 2.7e-05 25.6 1.1 1 23 452 474 452 474 0.98

15 15 8.6e-05 0.012 17.3 4.2 1 23 480 503 480 503 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	1.8	2.5e+02	3.7	1.5	1	23	71	93	71	93	0.86
2	15	1.9	2.5e+02	3.6	1.6	2	23	99	120	98	120	0.94
3	15	9.1e-06	0.0012	20.4	1.4	1	23	132	154	132	154	0.96
4	15	0.0016	0.22	13.3	0.7	3	23	159	180	158	180	0.93
5	15	0.0032	0.42	12.4	4.1	1	23	189	211	189	211	0.97
6	15	0.00045	0.06	15.0	0.3	1	23	216	238	216	238	0.97
7	15	0.048	6.4	8.6	4.6	1	23	244	266	244	266	0.97
8	15	0.11	15	7.5	1.7	1	23	269	292	269	292	0.96
9	15	4.3e-05	0.0057	18.2	2.1	1	23	301	323	301	323	0.98
10	15	0.0018	0.24	13.1	0.9	2	22	331	351	330	354	0.87
11	15	0.004	0.53	12.0	0.5	1	23	364	387	364	387	0.96
12	15	0.0045	0.59	11.9	2.2	3	23	396	416	394	416	0.96
13	15	0.00058	0.078	14.7	0.5	1	23	423	446	423	446	0.94
14	15	2e-07	2.7e-05	25.6	1.1	1	23	452	474	452	474	0.98
15	15	8.6e-05	0.012	17.3	4.2	1	23	480	503	480	503	0.96

Sequence Information

Coding Sequence: ATGCGTCAATTTCGTATGCCAATTCCTCATACGAAAAAtttatccaaattcaaaagACAGATAGGTACTATATTGAAGGATTTAAATACATTTGATGAGCAGGAAAAGTATGAagcattttcatatttacaAGGTTGTATTTCTGCTAAGAGAGTTAGCAAAAGTAGAACCAAGTTGAAAAGGAAAAGGCACACAATAACGCAGAGTATTTATAAATGCAAGGAATGTACTTATACAGATACAACCAGGAAAGGCATTTACTCTCATTTAGAAAATCATCCTGGTTTCCCATTATCTTGTAGATCATGTAGAAATTCATTCCAAAATAATTTGTCGTTTGAGTGGCACTTGCAGTTTCATTGCAGGCCAGGATTTTTGAAGAAGTATTCAACTTATATGTGCACTCAGTGTCCAAGAaaattttattctcaaCAAAATCTGAGGAGACATTTAGAAGGGCACAAAAGAAATAATTGTACATATTGTGACCAGGTCATTACCAACAGAAAACATCTCATTCAACACTTGATAGAAGTTCATTCAATCAAGTTAGAGCGAGCAATATTCAAGTGTACATTCTGTGATAAAAGGTATGTTAAATGGAGGTCACTATATTACCATAAGCAACAGCATTTTAAAGATAAATTTGTATGTTTGGATTGTGGAGTAATATGTAAAGATTCTGAAGACTTGAGTGAACATCAGAAAGAACATGAAGAGCAGAAACAATTCAAATGTATTAAATGTAATCAAAAATTCAGTAGGAGACAACAGTATTTATATCATGTGAAGAAACATGATAATTATAAATGCATAACATGCAAAGAAACATTTGCATCCAAAATGAAAATGCTTCTTCACAAGCGAAAAGGGCATAACGTGGAAGGATTAAAACCTAAATTTTCTTGTCCAGATTGTGGAAAGGATTTTTTTCAGAAGAGTAAGCTGATGTTTCACCTGAGGAAGCATACAGAAGATAAACCAACTCTCAATTGTCAATACTGTGACAAAACCTTCCAATCGCCTTATGCTTATTACAAACACAGCACAACAGTGTCACATGAAAAGTGTAGTCCTGAAACCAGTATTTTCGTTTGTGAAAGTTGTGGTAgtcaatttccaaaaaaatatttgttggaGCAACACACAACAAGAGTTCATAATAACAATAGAGAATATGTAAACTGTGAATTTTGTTCATACAAAACAAAGAACAAAGCCAACATGAAACGTCATCGAGACACTCATATCACTAATGGTAAAACATTTATTTGTGACCAATGTGGTAAAGATTTCAATAATATCGCGTGTCTCAAAGGACATATGGCCTATATTCACACAAAGAATAAACACTTCAAATGTGATCAATGTGACAAAATCTTTAAGAGAAACTCTGAACTTGTAAGACATCAAGGAACTCATTCTGACAGTAGGCCCCACGTATGTGAACTATGTGGTCAATCTTACAAAAGGTTAACTCATCTGAGACGACATGAGAAATCATCtcataaaattgaactgaaatctAGGGTAACTCAAAAGCTTCTTATTGAATCGGATGGTACACTCATTCCTGTAGAGCAAATAAGGAAGAAAGATCAGCAACTTAAAGCTTCTGCATCAAATATGGAACCTACTGCAGCGCCATTAATTTCATTACTTGGATCAGAGCCATTAGCACTTGTGAAGAAGAAAGATACTGTTCATTACGTGGATCAAATTGTTGTTGGGGAGGCAGTTCAGGATTTgacatatttcgaaaatatttgcaCAAATAACacaaattcagaattgaatatcTTGAAGGATGATATAATTTTGGATATGTCCTTGATGGGTAACACAGCAGGAAGTCAATACTTCTTGAATACACAATATACAAATGATCAGTTAATTCAAGAGTATATAGGACATGATAACATGCAGTTTGTTGACAATAATCCTAATATAGGTTCTCTGTCTTCCACTAGGTATGTTTCGAACAGCATTCTGAGTTTGATAGACACTCAAAATTGCAAGATTTAA
Protein Sequence: MRQFRMPIPHTKNLSKFKRQIGTILKDLNTFDEQEKYEAFSYLQGCISAKRVSKSRTKLKRKRHTITQSIYKCKECTYTDTTRKGIYSHLENHPGFPLSCRSCRNSFQNNLSFEWHLQFHCRPGFLKKYSTYMCTQCPRKFYSQQNLRRHLEGHKRNNCTYCDQVITNRKHLIQHLIEVHSIKLERAIFKCTFCDKRYVKWRSLYYHKQQHFKDKFVCLDCGVICKDSEDLSEHQKEHEEQKQFKCIKCNQKFSRRQQYLYHVKKHDNYKCITCKETFASKMKMLLHKRKGHNVEGLKPKFSCPDCGKDFFQKSKLMFHLRKHTEDKPTLNCQYCDKTFQSPYAYYKHSTTVSHEKCSPETSIFVCESCGSQFPKKYLLEQHTTRVHNNNREYVNCEFCSYKTKNKANMKRHRDTHITNGKTFICDQCGKDFNNIACLKGHMAYIHTKNKHFKCDQCDKIFKRNSELVRHQGTHSDSRPHVCELCGQSYKRLTHLRRHEKSSHKIELKSRVTQKLLIESDGTLIPVEQIRKKDQQLKASASNMEPTAAPLISLLGSEPLALVKKKDTVHYVDQIVVGEAVQDLTYFENICTNNTNSELNILKDDIILDMSLMGNTAGSQYFLNTQYTNDQLIQEYIGHDNMQFVDNNPNIGSLSSTRYVSNSILSLIDTQNCKI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -