Basic Information

Insect: Adalia decempunctata
Gene Symbol: -
Assembly: GCA_951802165.1
Location: OX637700.1:29713172-29715030[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.71 95 5.0 1.5 1 23 86 108 86 108 0.97

2 15 0.054 7.1 8.5 0.3 2 23 114 135 114 135 0.96

3 15 2e-05 0.0026 19.3 2.6 2 23 142 163 141 163 0.96

4 15 4.3e-06 0.00058 21.4 0.9 1 23 169 192 169 192 0.98

5 15 0.002 0.27 13.0 2.9 2 23 199 221 198 221 0.97

6 15 0.034 4.5 9.1 2.8 3 23 230 250 228 250 0.95

7 15 0.0086 1.1 11.0 0.4 1 23 255 278 255 278 0.93

8 15 0.025 3.3 9.5 0.8 5 23 284 303 282 303 0.91

9 15 5.1e-05 0.0068 18.0 2.5 3 23 311 332 310 332 0.97

10 15 7.3e-06 0.00098 20.7 0.2 2 23 340 361 339 361 0.98

11 15 1.6e-06 0.00021 22.8 0.4 1 23 365 387 365 387 0.97

12 15 0.0012 0.16 13.6 1.4 1 23 393 415 393 415 0.98

13 15 0.00034 0.045 15.4 4.3 1 23 421 443 421 443 0.96

14 15 0.078 10 8.0 5.2 1 23 449 471 449 471 0.97

15 15 0.92 1.2e+02 4.6 6.4 1 19 477 495 477 503 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.71	95	5.0	1.5	1	23	86	108	86	108	0.97
2	15	0.054	7.1	8.5	0.3	2	23	114	135	114	135	0.96
3	15	2e-05	0.0026	19.3	2.6	2	23	142	163	141	163	0.96
4	15	4.3e-06	0.00058	21.4	0.9	1	23	169	192	169	192	0.98
5	15	0.002	0.27	13.0	2.9	2	23	199	221	198	221	0.97
6	15	0.034	4.5	9.1	2.8	3	23	230	250	228	250	0.95
7	15	0.0086	1.1	11.0	0.4	1	23	255	278	255	278	0.93
8	15	0.025	3.3	9.5	0.8	5	23	284	303	282	303	0.91
9	15	5.1e-05	0.0068	18.0	2.5	3	23	311	332	310	332	0.97
10	15	7.3e-06	0.00098	20.7	0.2	2	23	340	361	339	361	0.98
11	15	1.6e-06	0.00021	22.8	0.4	1	23	365	387	365	387	0.97
12	15	0.0012	0.16	13.6	1.4	1	23	393	415	393	415	0.98
13	15	0.00034	0.045	15.4	4.3	1	23	421	443	421	443	0.96
14	15	0.078	10	8.0	5.2	1	23	449	471	449	471	0.97
15	15	0.92	1.2e+02	4.6	6.4	1	19	477	495	477	503	0.96

Sequence Information

Coding Sequence: ATGAATAATTCGAGCGATACAAATTTTGTTAATGTAAGTTCCTCCAACGAAATAAGCAGTTGCTTCAAAACGGAACCACCTGATATTGAGAATGAGGAATCCGAAATAAACCCTGAATGTTCATATGGATTCGAAAACAGTGATATAAAAGTTAAGATCGAGAAAGAATGGGCTGAACTTGACAACACTTCTGCCAGTGAAGGGCTTCAAAGaattgattcagaaaatattaaGATGGAAGGTAGTACAACCAAATATAATTGTGGGATCTGCGAATTTATAAGTGACACTTTCCATGAAATGAGAGAACATAGGAAATTACATTTTAAAGAAAAAAGGACTTGTGCTATGTGTGGAATGGTCTGCCAAAGTATAGGAAAGTTAGAAGTACATCAGAACGCACATTTTGGAATCAAACCATGTGTTTGTGACCAGTGTGGAAAATCTTATAGCTCCACCActcaattgaaaattcataagaGAATCCACACTGATGAAAAAAGATATAAATGTGATCAATGTGACGAAGCATTCCGATATAATGGTACCTTAAGGAGTCACAAAAGGATGGTTCATACCAGCATTTTGTTGACAACTTGTAAAGTATGTTCTAGATATTGTGAGACCGAAAATGATTTAAAAAAGCACATGTCAACAGTCCATTCGAAAGAGAAAAAGGCCATCAACTGCCAACTGTGTCAGAAGACTTTCAAAAGTGAACAGTTATTATCTTGTCATTTGAAAGTCCACAAAGAATTGCAGTTTCCTTGCGAATTTTGCCAAAGAATCTACCCTTCCTTGTACAGATTGAAAAAACATGTTGGAAGGGCACATATTCCTAATGTTTGTGAATGCAAAAAAGTGTTTTATGATAGAGCTGAATTTACTAAGCACAACAAAGAATTCCATAAAACTGAGGAACCCACTCTCTGCCAGCATTGTAATAAGAACTTTGATAAACCGAAGAATTTGACTGAACATATAAGACTCCAACATAGAGCCAACGGAAAAGTTAACAAATGCGATATCTGCGAGAAAGAGTTCATAAATGCTTCTCTCTTGAGGAACCACGTTAAAATCCATGATAAAAGCTTCAAATGCGAATATTGTGATAAAATTTTTGGTTCAAGGTACAATTTACAAATTCATCTAGTTGTCCACACAAAAGAGAGGAAATTCCAGTGCGAACAGTGCGGCAATTATTACGGAACCAAAACCGCTCTAAAAAATCACACTTACACCCATTTAGAAGTGAAGAACTTCCAATGTGATATCTGCAACAAGAAATTCAAAAGCAATCACAGATTATATGCTCATAAATCGTTGCACGAAGCTGAGAAAAAACATGAGTGTGAAATATGCCATGCTAAATTCACAATTAAACAGTATTTGAattttcacatgaaaaaacactCGAAAGAGAAACCTTTTGAGTGCAAACCTTGTCAAAGAAGATTCAAACACAAGAGATCCTACGAGAAACACTGCCTGCTTCAGAGACACATAAACGCAGTTAAAACTTGGGGAGGCGAGGAAGATTCTGATGACTCTGAAATGAGTTCTGCGATGGATTGCTCAGGAAATGGACAGGAAGAGACCAACGATGGAGCTCTGACTGAATCGAGTTCGGAATCAAACCAGGTGAATGATTTCAGGGAGGTTAAAATTAAAACAGAagttaaaattgaaaatgtagATTAA
Protein Sequence: MNNSSDTNFVNVSSSNEISSCFKTEPPDIENEESEINPECSYGFENSDIKVKIEKEWAELDNTSASEGLQRIDSENIKMEGSTTKYNCGICEFISDTFHEMREHRKLHFKEKRTCAMCGMVCQSIGKLEVHQNAHFGIKPCVCDQCGKSYSSTTQLKIHKRIHTDEKRYKCDQCDEAFRYNGTLRSHKRMVHTSILLTTCKVCSRYCETENDLKKHMSTVHSKEKKAINCQLCQKTFKSEQLLSCHLKVHKELQFPCEFCQRIYPSLYRLKKHVGRAHIPNVCECKKVFYDRAEFTKHNKEFHKTEEPTLCQHCNKNFDKPKNLTEHIRLQHRANGKVNKCDICEKEFINASLLRNHVKIHDKSFKCEYCDKIFGSRYNLQIHLVVHTKERKFQCEQCGNYYGTKTALKNHTYTHLEVKNFQCDICNKKFKSNHRLYAHKSLHEAEKKHECEICHAKFTIKQYLNFHMKKHSKEKPFECKPCQRRFKHKRSYEKHCLLQRHINAVKTWGGEEDSDDSEMSSAMDCSGNGQEETNDGALTESSSESNQVNDFREVKIKTEVKIENVD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00965382; iTF_00130748;
90% Identity: -
80% Identity: -