Basic Information

Insect: Adalia decempunctata
Gene Symbol: ham
Assembly: GCA_951802165.1
Location: OX637700.1:28985234-29030806[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.35 47 5.9 0.3 2 23 152 174 151 174 0.94

2 9 0.00025 0.033 15.8 2.6 1 23 181 204 181 204 0.95

3 9 9.1e-09 1.2e-06 29.8 3.1 1 23 210 232 210 233 0.96

4 9 1.4e-06 0.00018 22.9 1.7 1 23 239 261 239 261 0.95

5 9 3.4e-05 0.0046 18.5 5.0 1 23 267 289 267 289 0.99

6 9 0.013 1.7 10.4 0.7 2 21 297 316 296 317 0.91

7 9 1.2e-08 1.6e-06 29.5 0.7 1 23 641 663 641 663 0.98

8 9 1.5e-06 0.0002 22.8 1.6 1 23 669 692 669 692 0.97

9 9 1.2e-05 0.0016 20.0 3.4 1 23 698 720 698 720 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.35	47	5.9	0.3	2	23	152	174	151	174	0.94
2	9	0.00025	0.033	15.8	2.6	1	23	181	204	181	204	0.95
3	9	9.1e-09	1.2e-06	29.8	3.1	1	23	210	232	210	233	0.96
4	9	1.4e-06	0.00018	22.9	1.7	1	23	239	261	239	261	0.95
5	9	3.4e-05	0.0046	18.5	5.0	1	23	267	289	267	289	0.99
6	9	0.013	1.7	10.4	0.7	2	21	297	316	296	317	0.91
7	9	1.2e-08	1.6e-06	29.5	0.7	1	23	641	663	641	663	0.98
8	9	1.5e-06	0.0002	22.8	1.6	1	23	669	692	669	692	0.97
9	9	1.2e-05	0.0016	20.0	3.4	1	23	698	720	698	720	0.99

Sequence Information

Coding Sequence: ATGCCCCAGAGACGACCCGAAGAAGAAGAGTCGCATTCACAGCCTATTTATGGGCAGATTTCGGCGAGACCAAAGAATATAAAGATGCTACCGTTTTACCTAAGAGTCGGTTTAGGATGTGACGGTTCGGGAGTTGTTGCTGGATCAGGGGTGAGAGGATGGCTCGATGGCTCAATGGAACATCAAAATTGGCTCAAAATGATCACTTGCTCATTAGACAGGACGAATTTCAACGTCAGATATTACCTTCAAAGTGGACAGTTATGGTACGAAACATGTGTGGAAATTCCAACTGGCGTAGAACTGGTTTTAGGACCAAGGGAGCCTCTCAATCTTCAGGATATGTTTGGAGATTCCACGTCAGCTGATGAAAAATCCGACAGAGAAACAGCTTCGCAACATAGTGGTACTGTTGATGATCGTGAAGACGAAGAGGAAGATGAGTCTGAAGTGAGATGCTGTGTTTGTGAACAACCCTTCACGGAAGTCGATAAACTCGACGAACATCTAATAGTCAAGCACAACTATCGAAAAGACGAATTCAAGTGTGACTATTGCCCGAAAGCCTACAGTCACAGACCTTGCCTTATCAAGCATAAAGCTATCGTCCATGGGGAACACAGAAAATATCATTGCGAGAACTGCCCTAAGGTTTTTACCGATCCGAGCAATTTGCAGAGGCATATAAGGACGCACCACGTAGGCGCACGATCTCACGCCTGTCCTGAATGCGGAAAAACCTTCGCTACGTCTTCTGGACTCAAGCAGCATACACACATCCATTCCTCCGTCAAGCCCTTCCAGTGTGAAGTCTGCTTTAAGGCCTACACTCAGTTCTCGAACCTCTGCCGCCACAAACGGATGCACGCCGATTGCCGCATGCAGATAAAGTGCATCAAGTGCGGTCAGTCATTCTCGACAGTCACCTCACTCTCCAAACACAAACGATTCTGTGATTCAAGCGCCCCTGCTTCAACCCTGGGAGCCCCACCACCATTACCCTTGAACTCGATGGCCAGCAACAACCCCTTCTCCCTATACCGGCCAACCTGCCATATGCCTTTCTTTCCGCCACATTTCCCATCGTATCACCAAATTTTCCATCCTTCTGGACCACCCTCAGGATTCATCAACCCTCTGCTCTTCAACCAATTGCCTAAATTGAGAACCGACGATTTGCCAGAGCTGCCCTCGCCGAAGAAAATGAGGGCGTTGAGTGCTGAAAGGATTTCTCCATGTGCTGAACGTGTGACTCCTCCTAGAGTTCCTTCAGTGAACCACAAAGTTAGTCCGCCAACCGCAGAAGAAGCACATTTGGCGCCATCACCAACCAAGCCCACAATGGCACCTACCAAGATCGAAAAAACTGAGGCAAGATCGAGTACACCAGAAACCAACAGATATCCAACAGATTTATCCAAGAGCTCTGAGGAAAGAACCCAAAAACGATCCAGTCCAACAACCAGTGAAGACGGCGAGCAACCTCTCGATCTCAGTATGACATGGAAGAAATTCAAGAGTGAAGTGGCTGAAGTCTCATCACCTTCCCCAAGATCAGAAAGAGCAAGCGAAACCAGCACGCCACACGTCTCCAACGAGGAGAAGATAGATGTTATAAGTTTGGAGGAAGAAAAGAGGAACCTTGAGAAACTTCAAACGACCCCACCTATGGCTTACCCCAGACCAATTCATCCAATGCTTCTCGATATGTATCGACCCAGTTTCGCCAATTTTTCACCCCAACCAAACAACGACAGGTTACTGCCTTCTCCCTTTGGTCCACACAGATTTCCATTTTTAAACAATCTTCAACCACAACGAAACTTCGACTTGTTAAGGCCAGGACTACAGAATTTCGGAGGCGTCAAACCTTTCCACGATGTGATGCAGCAACAAACTCAAGGAAAGATCAAGGATAGATACGCTTGCAAATTCTGTGGCAAAGTTTTTCCAAGGTCTGCAAACCtgacaagacacttacgaacacATACTGGAGAACAACCATACAAATGCAGATACTGTGAAAGGTCTTTCAGTATATCCAGCAATTTACAAAGGCATGTCAGGAATATTCACAACAAGGAGAAGCCTTTCAAATGTCCCTTGTGTGAAAGATGCTTCGGTCAACAAACTAACCTAGATAGACATCTAAAGAAGCACGAGGCTGATGATGGCAGTGGAGGTGTTGTGGTAGCAGATTCCCCAGGAAGCAGCAACGAAAACGAAAGAGAAGACGCTTATTTCGATGAAATTCGAAGCTTTATGGGCAAAGTAACTTATTCCGGCAATGAACCTTACAACCAGACCCGACTATTCTCCCCACCCTCCCACAATATCATAGATGTTGTTGGTAAAGATGAAGAAGATTCTGAGAGTTTCTCAGATGGAACACCTCTAGAAGATTACAACGAATTGAAATCAGATGATTACGACATGAAAATCAAAACTGAAAGAGACGAAATATTGAACAACAACGAACAACCTATCGAACTCGCTTCATAA
Protein Sequence: MPQRRPEEEESHSQPIYGQISARPKNIKMLPFYLRVGLGCDGSGVVAGSGVRGWLDGSMEHQNWLKMITCSLDRTNFNVRYYLQSGQLWYETCVEIPTGVELVLGPREPLNLQDMFGDSTSADEKSDRETASQHSGTVDDREDEEEDESEVRCCVCEQPFTEVDKLDEHLIVKHNYRKDEFKCDYCPKAYSHRPCLIKHKAIVHGEHRKYHCENCPKVFTDPSNLQRHIRTHHVGARSHACPECGKTFATSSGLKQHTHIHSSVKPFQCEVCFKAYTQFSNLCRHKRMHADCRMQIKCIKCGQSFSTVTSLSKHKRFCDSSAPASTLGAPPPLPLNSMASNNPFSLYRPTCHMPFFPPHFPSYHQIFHPSGPPSGFINPLLFNQLPKLRTDDLPELPSPKKMRALSAERISPCAERVTPPRVPSVNHKVSPPTAEEAHLAPSPTKPTMAPTKIEKTEARSSTPETNRYPTDLSKSSEERTQKRSSPTTSEDGEQPLDLSMTWKKFKSEVAEVSSPSPRSERASETSTPHVSNEEKIDVISLEEEKRNLEKLQTTPPMAYPRPIHPMLLDMYRPSFANFSPQPNNDRLLPSPFGPHRFPFLNNLQPQRNFDLLRPGLQNFGGVKPFHDVMQQQTQGKIKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCRYCERSFSISSNLQRHVRNIHNKEKPFKCPLCERCFGQQTNLDRHLKKHEADDGSGGVVVADSPGSSNENEREDAYFDEIRSFMGKVTYSGNEPYNQTRLFSPPSHNIIDVVGKDEEDSESFSDGTPLEDYNELKSDDYDMKIKTERDEILNNNEQPIELAS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00349445;
90% Identity: iTF_00130747;
80% Identity: -