Adec034902.1
Basic Information
- Insect
- Adalia decempunctata
- Gene Symbol
- -
- Assembly
- GCA_951802165.1
- Location
- OX637703.1:19116692-19118667[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.00014 0.019 16.6 1.5 1 23 64 87 64 87 0.97 2 15 0.00019 0.026 16.2 0.3 1 23 93 116 93 116 0.97 3 15 0.00014 0.019 16.6 0.1 1 23 122 145 122 145 0.96 4 15 0.00025 0.033 15.8 0.3 1 23 151 174 151 174 0.96 5 15 0.007 0.93 11.3 0.8 1 23 180 202 180 202 0.97 6 15 4.3e-05 0.0058 18.2 1.6 1 23 208 231 208 231 0.93 7 15 0.044 5.8 8.8 0.3 2 23 238 260 237 260 0.96 8 15 0.0002 0.027 16.1 0.3 1 23 266 289 266 289 0.97 9 15 0.049 6.5 8.6 0.4 1 17 295 311 295 312 0.95 10 15 0.18 24 6.8 0.3 1 23 324 347 324 347 0.94 11 15 0.0024 0.32 12.8 4.0 1 23 353 376 353 376 0.96 12 15 0.0024 0.32 12.8 2.5 1 23 382 405 382 405 0.97 13 15 0.0012 0.15 13.7 2.1 1 23 411 434 411 434 0.97 14 15 0.0016 0.21 13.3 0.1 1 23 440 463 440 463 0.97 15 15 0.11 15 7.5 0.2 1 23 469 492 469 492 0.94
Sequence Information
- Coding Sequence
- ATGACTTCCAATAATGAGTCTTTGGAAAATGTGGTTCAGAGCATGGAATCAGAACAAATGGATATATTCAAACATTTTATGATCGAGAATGAGATTTGTGATGGACAAGATACTGCTGAATATTGTGATCTCATAAAAAATGTTGATATCCACCAAGTTGTTGACAGATTAGCAAGTGATTTGAATCAGTACAAATGTCACTCATGTGATTATACAGCACGTCAAAGAGGAGACCTCAAAAACCACATAGAATCTCTTCATTTGGATCTAAAGCAGTACAAATGTAACTCATGTGAATATGCATCGATTAGAAAAGCagatctcaaaaaacatatagaaTCGGTTCATTTGGATCGGAAGCAATACAAATGTCCCTCATGTGAATATGCAACGAGTGAAAGTGcaaatctcaaaaaacatatagattCCGTTCATTTAAAGTTGAAGAAGTATGAATGTTCCTTTTGTGGTTATTCGGCAAACTTGAAAGGCAATCTCAAGAAACATatagattccgttcatttgaatttgaagcagTATAAATGTGCCTCATGTGATTATACGGCAAATTTGAAACAGAACCTCAAAAAACATGTAGATTCTCATTTGAATTTAAAGCGCTACCAATGTCCTTCATGTGATTACACTGTGAATAATAAGATACATCTCAAAAGACATATGGATTTTGTCCATTTGAATTCAAAGATGAACAAATGTGGCTCTTGTGATTATGCCGCAAATCTAAAGCGGGATCTCAAACAACATATgagttcagttcatttgaatttaAAACAGTATGAATGTCCTTCGTGTGATCATGCAGCGGATAGAAAAGGTGATCTCAGGAAACATATGACTTCTGTTCATCTGAATTTGAAGCAATACAAATGTCCCTCCTGCGAATATGCAACAAGTgataaaaaaaatcttgaaacaTATAGAGATAGTGTTCATCTAAACTTGAAGCAGTATAAATGTGACTCATGTGATTATGCATCAAATATGAAAGGTGGTATAAAAAAACATAAGGATTCTGCTCATCCAAGTTTGGAGTCCCATAAATGTCACAAATGTGACTATGCGACACAAAGTAAAGGAGTTCTCAAACGTCATATCAAAAATGTCCATTTGAATTCGAAACAGTACAAATGTCACAAATGTTATTATGCAACAAATAGAAAATGGGATATCAAAAAACATATTGAAtccgttcatttgaaaatgaagcAGTACAAATGTCACTTATGTGATTATGCCGCCAACTACAGGGGACACCTCAAAGATCATGTTAATTCTATACATTTGAATTTAAAGCAGTACAAATGTCCATCGTGTCCATATGCAGCAAATAGACAAGGATATGTCAAGAGGCATATAGAGTCTGTTCATTTCAATTCGAAGCAGTACAAATGTGACTTGTGTGATTTTGCTTCGGATATACTAGGAAATCTTAAAATGCATAAAGATTCTCTTCATTCGAATTCGTCTCTCATGTGA
- Protein Sequence
- MTSNNESLENVVQSMESEQMDIFKHFMIENEICDGQDTAEYCDLIKNVDIHQVVDRLASDLNQYKCHSCDYTARQRGDLKNHIESLHLDLKQYKCNSCEYASIRKADLKKHIESVHLDRKQYKCPSCEYATSESANLKKHIDSVHLKLKKYECSFCGYSANLKGNLKKHIDSVHLNLKQYKCASCDYTANLKQNLKKHVDSHLNLKRYQCPSCDYTVNNKIHLKRHMDFVHLNSKMNKCGSCDYAANLKRDLKQHMSSVHLNLKQYECPSCDHAADRKGDLRKHMTSVHLNLKQYKCPSCEYATSDKKNLETYRDSVHLNLKQYKCDSCDYASNMKGGIKKHKDSAHPSLESHKCHKCDYATQSKGVLKRHIKNVHLNSKQYKCHKCYYATNRKWDIKKHIESVHLKMKQYKCHLCDYAANYRGHLKDHVNSIHLNLKQYKCPSCPYAANRQGYVKRHIESVHFNSKQYKCDLCDFASDILGNLKMHKDSLHSNSSLM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -