Adec034374.1
Basic Information
- Insect
- Adalia decempunctata
- Gene Symbol
- -
- Assembly
- GCA_951802165.1
- Location
- OX637703.1:10037948-10040043[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.46 61 5.6 2.1 2 23 114 136 113 136 0.91 2 15 0.00012 0.016 16.8 1.5 2 23 164 185 164 185 0.97 3 15 0.00015 0.02 16.5 2.7 1 23 188 211 188 211 0.96 4 15 0.079 10 8.0 0.2 1 19 248 266 248 269 0.78 5 15 0.0094 1.2 10.9 0.6 2 22 289 309 288 309 0.95 6 15 9.9 1.3e+03 1.4 0.4 2 23 351 373 351 373 0.82 7 15 0.41 54 5.7 0.7 1 19 390 408 390 413 0.89 8 15 7.7e-05 0.01 17.4 1.0 1 23 423 445 423 445 0.95 9 15 8.9e-07 0.00012 23.5 1.7 1 23 451 473 451 473 0.96 10 15 2.7e-07 3.7e-05 25.1 0.4 1 23 479 502 479 502 0.97 11 15 0.00045 0.06 15.0 4.0 1 23 510 532 510 532 0.99 12 15 1.4e-05 0.0019 19.8 1.5 1 23 538 560 538 560 0.95 13 15 0.001 0.14 13.9 2.5 1 23 566 589 566 589 0.96 14 15 0.00024 0.032 15.9 2.4 1 23 603 625 603 625 0.97 15 15 4.6e-07 6.2e-05 24.4 3.3 1 23 631 654 631 654 0.97
Sequence Information
- Coding Sequence
- ATGGATAAAACAACTTGCTGTGTGTGTTTCAAAGGAAACGCAAATATTCCATTGGCTGCCAGCGATTCCAATAAAGAAACAATTACATCTAAATTACGAAAAGTtgtatctgaagtgCCATGGAAGGACACTTTCACAATATGCCCCCAATGTTTGAAAACTTTGGACGTTGTATTAGAATTCAGAAATGCATGCATAAGATCCAGCTCGATCAGATTGGAACAAGAAGATTCTGGATTAAAAAATGAATCTATTACTATGAAAGAAGATGAAAGTAGTAGCAGTGGCGAAGAAATTGAGAAAATCACTGAAGACAGCTCGGAACAGACAATAGCTGTGACTTGTGAAATTTGTAAAATAGATCTGAATTCTCACGAACATTTATACAAGCATAATAAAGATTTACATCATTCTCAGCAACAATACAAGAACGATTTATTATGtgttgaaaaaaatgttgatcTGGTTGAAAATAGGAATAAAAGTGAATCTTGTCATGTATGCAATGAAAGTTTTTCTTCAGAGCCGGATTTAAAATACCATGTTAAGAAGCATGACGTCTTCATATGCTTCCACTGCGATAAGCTATTTAAAAGCAAAGTGTTGCTTGCTAAGCATATAAAACTCAAACATGAACATGAAAAACAGTTTGATAGTTCAAATAATGAAGAGAAAGGTACAGACAATCCAGATAATTCACAATCTTCTGATGACAATTCAAGTAGTAGGAAGAGTAAAATATATCAGTGTAGCAAGTGTGAAAAATCATACAAAGTggaaaaaattatgttgaatCATATGGTCACCTGTGATGGTGTAAAAAGACATTCTAAAATAAATTTCACTAAGGATTTATCGAAAAACAAGTGTGCAAAGTGTGGTAGGTTCTACACAACAGAAAAAATTCTGAAAGCACATATGAAGCGGTGCAGATATAAATTACCATTGCAAGAGTATAAGTGTTATTTGTGTGACGATGTTTTGAAAAGTATGAAAGATAAATTTGTGCATGTTTTGGAGAAGCATAATATTAATTTAAAACTAGGTAATACATGTGAGTACTGTTATGAACAGTTTTTGAGTGATGAAAATTTACAATTTCATCTGAAGGAATTGCATGGGaatgaaataaattcaaaaaaagcCAAATCGTTTACTGAAAGAAGTTATTCATGTGAGGTTTGTTCCAAAATTTTCGGTTATGTTAAGGAGGTGATAAAACATTGTATTGAGGAGCACCAGATGGATGGGAAATCCATCAAACCATACCTATGCAGTATATGTAACACTCGTTTTACATCTTCCCCAAATTTGATTCAACACAAACAGTATCACGAAGGAGAACGCAGCCACATATGCAGTTACTGCGGAAAGAGCTTCATCACAAAAAGCGATTTGACGGTACACGAATACACTCATTTGAATAGAAGAAACTACAAATGTGAGATATGTGAAAGAGCTTTCAACACCAACAAGAATTTGAGGTCTCATATGTTGGTTGTTCATACAGATTCTAGTTTTTGGAAGTATCAATGTCATTTGTGTAGCAAGAAGTTTCCTTTGAAGTCGGGTTACGATCAACATCAGAGACGACATTCTGGAGATAAAAGATTCAAGTGTTTAGTGTGTGAAAAATCGTTCATTAGCAGTAGTGAGCTGAGGAAACATAAAATATTCCATTCCAACGAGAGAGCGTTCAAGTGTTCCCACTGCGGCAAAGACTACAAAGATCGTAGGGTTTACGAGGTGCATTTGACCAAAGTTCACGGGATTGGAAATGCTAAGATTCCTGTCCGGGTGAAGAAATTTGCATGTAGCATTTGTCCAGGGACGTTTTTTGATAAGCAGAAACTTTCAAGACATATGTGCACACATACAGGTATCAAACCTTTCATTTGTAAAATTTGCAATAAGAGATTTAGTGATAAGTCGTATTTGAAGCATCATTTGAAAATTGTGCATAATATTGTGGATATTCAGGCTAACGATGGAAATATTGTCCAAAGTTTCCAGGGGATGGTAACCGAACTTAAGAAcgaattctga
- Protein Sequence
- MDKTTCCVCFKGNANIPLAASDSNKETITSKLRKVVSEVPWKDTFTICPQCLKTLDVVLEFRNACIRSSSIRLEQEDSGLKNESITMKEDESSSSGEEIEKITEDSSEQTIAVTCEICKIDLNSHEHLYKHNKDLHHSQQQYKNDLLCVEKNVDLVENRNKSESCHVCNESFSSEPDLKYHVKKHDVFICFHCDKLFKSKVLLAKHIKLKHEHEKQFDSSNNEEKGTDNPDNSQSSDDNSSSRKSKIYQCSKCEKSYKVEKIMLNHMVTCDGVKRHSKINFTKDLSKNKCAKCGRFYTTEKILKAHMKRCRYKLPLQEYKCYLCDDVLKSMKDKFVHVLEKHNINLKLGNTCEYCYEQFLSDENLQFHLKELHGNEINSKKAKSFTERSYSCEVCSKIFGYVKEVIKHCIEEHQMDGKSIKPYLCSICNTRFTSSPNLIQHKQYHEGERSHICSYCGKSFITKSDLTVHEYTHLNRRNYKCEICERAFNTNKNLRSHMLVVHTDSSFWKYQCHLCSKKFPLKSGYDQHQRRHSGDKRFKCLVCEKSFISSSELRKHKIFHSNERAFKCSHCGKDYKDRRVYEVHLTKVHGIGNAKIPVRVKKFACSICPGTFFDKQKLSRHMCTHTGIKPFICKICNKRFSDKSYLKHHLKIVHNIVDIQANDGNIVQSFQGMVTELKNEF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -