Basic Information

Insect: Adalia decempunctata
Gene Symbol: -
Assembly: GCA_951802165.1
Location: OX637695.1:26850924-26854541[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0028 0.37 12.5 0.3 3 23 353 373 351 373 0.96

2 12 0.1 13 7.6 0.3 2 23 376 398 375 398 0.94

3 12 2.9e-07 3.8e-05 25.1 0.8 2 23 488 509 487 509 0.97

4 12 0.00028 0.037 15.7 0.4 1 23 515 537 515 537 0.97

5 12 0.00023 0.031 15.9 2.0 1 23 543 565 543 565 0.98

6 12 0.00026 0.035 15.8 0.5 2 23 572 593 571 593 0.96

7 12 0.00055 0.073 14.8 0.7 1 23 599 621 599 621 0.97

8 12 2.9e-07 3.9e-05 25.1 1.8 1 23 629 651 629 651 0.98

9 12 0.01 1.3 10.8 0.4 1 23 657 679 657 679 0.93

10 12 1.1e-05 0.0015 20.1 1.1 1 23 685 707 685 707 0.98

11 12 0.00056 0.074 14.7 0.4 1 23 713 735 713 735 0.97

12 12 0.00014 0.019 16.6 1.8 1 23 741 763 741 763 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0028	0.37	12.5	0.3	3	23	353	373	351	373	0.96
2	12	0.1	13	7.6	0.3	2	23	376	398	375	398	0.94
3	12	2.9e-07	3.8e-05	25.1	0.8	2	23	488	509	487	509	0.97
4	12	0.00028	0.037	15.7	0.4	1	23	515	537	515	537	0.97
5	12	0.00023	0.031	15.9	2.0	1	23	543	565	543	565	0.98
6	12	0.00026	0.035	15.8	0.5	2	23	572	593	571	593	0.96
7	12	0.00055	0.073	14.8	0.7	1	23	599	621	599	621	0.97
8	12	2.9e-07	3.9e-05	25.1	1.8	1	23	629	651	629	651	0.98
9	12	0.01	1.3	10.8	0.4	1	23	657	679	657	679	0.93
10	12	1.1e-05	0.0015	20.1	1.1	1	23	685	707	685	707	0.98
11	12	0.00056	0.074	14.7	0.4	1	23	713	735	713	735	0.97
12	12	0.00014	0.019	16.6	1.8	1	23	741	763	741	763	0.98

Sequence Information

Coding Sequence: ATGGCCTCCACGGTAGATCTATCAAGATACGGAGATTTGTGTAGATTGTGTGCCACTAAAACTACTCTAGTATTGGGCATACATATTTTTGAGAATGAAGGATCTCTCAGAGAAgttaggaaaaaaattgaatgctgtcttccactacAAgTACACCAAGCAGATGCTTTACCTAAAATGATCTGTGAAAGTTGCTTGTATAAATTAGAATTGCTTTTTGAATTTCGAGAAAGAAGTGTAAGAACAGATAAACTTCTCCAAGATCTGGTTAAAGAACttgacaatgaaaaaattcaacaagAAGGAACAATTAATGTTCTCTCGATGGATCATAATAGTTTAATTATGATACCAGACCACCATCTCCTAGGACACCAAATGCAAAACATGCAGATGGACTTATCACATCTGAATCAACGAGATGGTATTGTGGTTGAGCACAACCTAATTTTAGCTCAATCGCATCAATCAGACGTAGGCTTGGATCCCAGCGGCCAAGGTTTAGCTAGTTTAGATTTGAACCATCATGATTTCACAACCCAAGATTTGTCAAATCATAGTTTGCAAGCTCAAGAAGCTATGTTGATGAATAGTGCCAATACTCATGCTCTTCATGATGCTCAATTTACCGAAGAGAATTTGGATATTATTCATCAGCAAAATATTATACAACAACACCAGATGTTACATGAACAATATAGACTTCCACATGAATTGGAAGTTGAGAATATATCTTTAGAAGATTTATCTCATGTTGATACTGTGCATCAAATACAAAGGGACAAACATGAAATATTTAGTGGAACTAAATCGGTTACTCATTTAAGTTATTCTCATTCTCGTCATCAGAATATCGCTTCTGAACATTGCAATATTCAAATCACAAGTGATAATATTAAGTTGGAATCTCTCAGTCACCATGAAGATAGCAACAACACAGAAAGTCAGATTATATTGGACAGTGATAGACTGACAAATGAAGAAGATAAGATGTATCTTCTACaacacaataatttattagatAGAATTAATGGCAATACttcagaaaatatattttgTAATGTGTGTGGTTCagatttttcaagcaaggaaGCATTTGAAGAGCACTATTCAAGACATATTATTAAGTGTCATATATGTTATGCTGCTTTCACAAGtgatgaaatcttgaatatacatataaagCAATTACATGAAAATGTAGATACGAGATCGCAGGAAAATCAATCAGTTGAAGAGATAAAACCGGTCAAAACGAGATTAAAAAGAGCTCTAAAATCGCCAATTAGAACAGTTGAAAACAGTGATGACAATAATGAGGACAGTGCTAGTTACAATAACGATACAGATGCTGCAGAGCAGACACAATTGGTTGAAGAGGTCATAAATAATAATGAGGACAAATCAAAACCAAATCTTGAAGAGAATAAATctcaacaaagaaaaaaatgggtTCCCAAGGTAtgtgaagaatgtggaaaagtttaCACTACGAATTACAAACTGAATGAGCATATGAGGAAACATACTGGGGAAAAACCTTATAAGTGTGGttcctgtgaaaaaagtttcagaTCTAAAATTGGACTTGCTCAACATGAAGCCAAACACACAGGCCAATATGAGTTCTCTTGTCCAACATGTGGCAAAGGTTTTCAGTGTCGTAGTTATCTAATGGTTCATCAAAGAGTACATTCTGATGTTAAACCTTGGCCTTGTTCAACTTGTGGGGCTAATTTTAAGACCAAGCAATCTCTCTTAGACCATACAAACCGTCATTTGGGAGTTAAACCTTTCATTTGTGATGTTTGTGGCAGAGGATTTATAACTAAGGGTTTATGCAAGGCACATCAGAAGATACATAATGGTTTGGACAACAGAAAATACTCTTGTAAAATCTGTAATAAAATGTTTGTGTCCAAAAGTTATCTgcaaacacatttgaaaattcACACTGGGGAGAAGCCATACTCTTGCGAGGTGTGTAACAAAGGCTTTTTGACAAGAGTGGATTTGAAAATACATTCAACATTGCATACTGGTGAAAAAGCTTTTGTATGCGAGATATGTGGAAAAGCTTTTGCGAGGAGAGATGCTCTCAGGTGTCATAGGAGATCGCACACTGGGGAACGACCCTACAGCTGTGATATTTGCGGTCAAACATTCACACAGTTTACTCCTATGGCCATTCACAAGAGGTTGCATACAGGAGAAAGACCTTATTCttgtgaattttgtgaaaagacCTTCGTCTCTCGTTCAACGATGATGTCTCATGccaaaaaacataaaacttaa
Protein Sequence: MASTVDLSRYGDLCRLCATKTTLVLGIHIFENEGSLREVRKKIECCLPLQVHQADALPKMICESCLYKLELLFEFRERSVRTDKLLQDLVKELDNEKIQQEGTINVLSMDHNSLIMIPDHHLLGHQMQNMQMDLSHLNQRDGIVVEHNLILAQSHQSDVGLDPSGQGLASLDLNHHDFTTQDLSNHSLQAQEAMLMNSANTHALHDAQFTEENLDIIHQQNIIQQHQMLHEQYRLPHELEVENISLEDLSHVDTVHQIQRDKHEIFSGTKSVTHLSYSHSRHQNIASEHCNIQITSDNIKLESLSHHEDSNNTESQIILDSDRLTNEEDKMYLLQHNNLLDRINGNTSENIFCNVCGSDFSSKEAFEEHYSRHIIKCHICYAAFTSDEILNIHIKQLHENVDTRSQENQSVEEIKPVKTRLKRALKSPIRTVENSDDNNEDSASYNNDTDAAEQTQLVEEVINNNEDKSKPNLEENKSQQRKKWVPKVCEECGKVYTTNYKLNEHMRKHTGEKPYKCGSCEKSFRSKIGLAQHEAKHTGQYEFSCPTCGKGFQCRSYLMVHQRVHSDVKPWPCSTCGANFKTKQSLLDHTNRHLGVKPFICDVCGRGFITKGLCKAHQKIHNGLDNRKYSCKICNKMFVSKSYLQTHLKIHTGEKPYSCEVCNKGFLTRVDLKIHSTLHTGEKAFVCEICGKAFARRDALRCHRRSHTGERPYSCDICGQTFTQFTPMAIHKRLHTGERPYSCEFCEKTFVSRSTMMSHAKKHKT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00349434;
90% Identity: -
80% Identity: -