Basic Information

Insect: Adalia decempunctata
Gene Symbol: -
Assembly: GCA_951802165.1
Location: OX637701.1:25721133-25731216[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.07 9.3 8.1 1.6 1 21 149 169 149 170 0.94

2 14 0.00014 0.018 16.6 1.3 1 20 179 198 179 201 0.95

3 14 6e-06 0.0008 20.9 4.6 1 23 207 229 207 229 0.98

4 14 5.2e-05 0.0069 18.0 1.7 2 21 256 275 256 276 0.94

5 14 1.8e-05 0.0024 19.4 3.5 1 23 285 307 285 307 0.98

6 14 4.7e-05 0.0063 18.1 4.3 1 23 312 334 312 334 0.98

7 14 0.11 15 7.5 1.5 2 20 360 378 360 380 0.92

8 14 0.0023 0.31 12.8 7.7 1 21 389 409 389 411 0.96

9 14 0.0021 0.28 12.9 5.8 1 23 445 467 445 467 0.98

10 14 0.00022 0.029 16.0 3.1 1 23 490 512 490 512 0.96

11 14 4.7e-05 0.0063 18.1 1.2 1 23 518 540 518 540 0.98

12 14 6.4e-07 8.6e-05 24.0 4.8 1 23 546 568 546 568 0.99

13 14 0.0017 0.22 13.2 2.1 1 23 574 596 574 596 0.99

14 14 1.8e-05 0.0024 19.4 0.9 1 23 602 624 602 624 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.07	9.3	8.1	1.6	1	21	149	169	149	170	0.94
2	14	0.00014	0.018	16.6	1.3	1	20	179	198	179	201	0.95
3	14	6e-06	0.0008	20.9	4.6	1	23	207	229	207	229	0.98
4	14	5.2e-05	0.0069	18.0	1.7	2	21	256	275	256	276	0.94
5	14	1.8e-05	0.0024	19.4	3.5	1	23	285	307	285	307	0.98
6	14	4.7e-05	0.0063	18.1	4.3	1	23	312	334	312	334	0.98
7	14	0.11	15	7.5	1.5	2	20	360	378	360	380	0.92
8	14	0.0023	0.31	12.8	7.7	1	21	389	409	389	411	0.96
9	14	0.0021	0.28	12.9	5.8	1	23	445	467	445	467	0.98
10	14	0.00022	0.029	16.0	3.1	1	23	490	512	490	512	0.96
11	14	4.7e-05	0.0063	18.1	1.2	1	23	518	540	518	540	0.98
12	14	6.4e-07	8.6e-05	24.0	4.8	1	23	546	568	546	568	0.99
13	14	0.0017	0.22	13.2	2.1	1	23	574	596	574	596	0.99
14	14	1.8e-05	0.0024	19.4	0.9	1	23	602	624	602	624	0.97

Sequence Information

Coding Sequence: ATGGCTACCTTAAAAATCTCTACTGATTTTTCCATCATTTGTCGAACTTGCCTTTCCCATAATCGACCCctgtcggatttaaatgaagGAAACATTAATGAAACTTTAACACAATTCACGAATTTGAAGatttattcgcAGGACAGAATGCCAAAGAAAATTTGTTCGATTTGTTTAAATACACTCCAGAACATGTTGAATTTTGTAGAGAAATGTAAAATGTCTGATTTAATTTTAAGATTGGTTCTTAAAGAAATGGACCTTAACGAAAAGAGTAACAAAGATGCCTTATCCACAGTAGAATCAGTACAATCATGTCATGAAAATTTTCTTGAAGTGGTGGAAGTTGAGTCTTCGGATGGAGAAACACATCAAGAATATGAAAAAACTGATATTGAACATGGTGGGGTACAGTTTAATGGAAAGCATTTTAATAAAACATGCCACAAATGTGAATGTTGTGGGGAAACATTTGATGATCAAAACAGACTATGGGAGcatttgaaacaaaataaaacTTGTATGGATAATCGATTCAAATGTCCTACATGTTCAAAATCATTCTCTGAAGAGGTCGGGTTGAAAGCTCATATGGAGTGCCATGCAAAAAAAGCCTGTTTCAAATGCAACATTTGTTCTAAAGCCTTCAAATCTAAACACTATCTTTCAAGGCATCAAACCATACATGAAGAGGAGGAAACGACTGAAGACATAGACCAGAGTGAAACTCAGGTGAATGAGAAGTGTTTATGCAGAAAAAGTCCAAGATGCAACCATTGTGGTGAGAAATTCAGTGATCTGAAGGAACTAAAGAAACATTATAATCAAAATGAAATATGTTTGAAGAATCGTTTCAAGTGCCCCTTATGTTCAAAAGGATTCTCCCAAAGACACATGTTGAAAACGCATATTTTCAGCCACAGAAAAGGCCCTTTCAGATGCAATATTTGTTCTAAATTGTTCAGATTCTCACATAATCTTTTGAAGCATCAGAACATACATAAAGAGGAGGAAACTGAAAGAATGGCAGAGAATGAAATACATGTAAATGGGAAATGTCCTTTCAGAAAATCTCCTGAATGCACATTTTGTGGAGAAAAATTCTGTGGGACGAAAGAACTTATGGAACATtttaaacaaaatgaaaattgtTTCAAGAATCGATTCAAATGTTCTATATGCTCTAAAGGATTCTGCCGAAGATATAAATTGGATAACCATATGCGTTGTCATACAAAAGAACCTACTTTCAAATATCAAAACATTCTTGTAGGATTTTACGGAGACGCAGCAAGAGCAGCCCATTTACGGACTCATACAGGCGGGGTCGCTTTCACCTGTAAATACTGCGGACAGAATTTCAAAACATACTACAGTCACAGAAGGCATATTATTAGACATGAAGCGCCGGAAAGATTGATGCGTAAAGTTTCCCGGGCTGAAGGATTAGAGCAAAGAGTGCCTGAATTTCTTTGTCACCTTTGTGGAAAACAATGCAAGTCAAAAGTTAGTCTTGATGTTCACATAAGAGTTCACTCTGGTATCAAACCATATAAATGTTCCTACTGTAACAGGCTTTTTGCTTATCAGTCTTCACTGGCATCACATACTATGTTACACACAGGTAGAAGACCATATAGCTGTAATGTATGTGATAAATCATTTATTCAGGGTCATCATTTGAAGAACCATATGAGAACACATAGTGGGGAGAAACCTTATGTTTGTTCCTTCTGTAACAAAGGTTTTGCAGTTAGTTATAATCACAAAGTACATGTAAGAACTCATACAGGGGAAACTCCATTTGTTTGTTCTATTTGCAATTTAGGTTTTTATGATTCAAGTAGTTTGAAGAAACATAAGAAAGGACATGGGGAGGGGGCAGAGTTGAAAGAAGCAAATCAAAGATTTGAGAAAAAAAGCAACATTTTTCTTGATCATTAA
Protein Sequence: MATLKISTDFSIICRTCLSHNRPLSDLNEGNINETLTQFTNLKIYSQDRMPKKICSICLNTLQNMLNFVEKCKMSDLILRLVLKEMDLNEKSNKDALSTVESVQSCHENFLEVVEVESSDGETHQEYEKTDIEHGGVQFNGKHFNKTCHKCECCGETFDDQNRLWEHLKQNKTCMDNRFKCPTCSKSFSEEVGLKAHMECHAKKACFKCNICSKAFKSKHYLSRHQTIHEEEETTEDIDQSETQVNEKCLCRKSPRCNHCGEKFSDLKELKKHYNQNEICLKNRFKCPLCSKGFSQRHMLKTHIFSHRKGPFRCNICSKLFRFSHNLLKHQNIHKEEETERMAENEIHVNGKCPFRKSPECTFCGEKFCGTKELMEHFKQNENCFKNRFKCSICSKGFCRRYKLDNHMRCHTKEPTFKYQNILVGFYGDAARAAHLRTHTGGVAFTCKYCGQNFKTYYSHRRHIIRHEAPERLMRKVSRAEGLEQRVPEFLCHLCGKQCKSKVSLDVHIRVHSGIKPYKCSYCNRLFAYQSSLASHTMLHTGRRPYSCNVCDKSFIQGHHLKNHMRTHSGEKPYVCSFCNKGFAVSYNHKVHVRTHTGETPFVCSICNLGFYDSSSLKKHKKGHGEGAELKEANQRFEKKSNIFLDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -